RNA–Protein interactions for RNA: YHR060W

VMA22, Transcript of Protein that is required for vacuolar H+-ATPase (V-ATPase) function, yeast

Gene VMA22, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA22	YHR060W	YPT32	P51996	222 aa	Known RBP	3.77	□□□□□ -1.81
VMA22	YHR060W	ZRG17	P53735	605 aa		3.77	□□□□□ -1.81
VMA22	YHR060W	TDA1	Q03533	586 aa		3.77	□□□□□ -1.81
VMA22	YHR060W	GAS2	Q06135	555 aa		3.77	□□□□□ -1.81
VMA22	YHR060W	SFH1	Q06168	426 aa		3.77	□□□□□ -1.81
VMA22	YHR060W	SMD2	Q06217	110 aa	Known RBP	3.77	□□□□□ -1.81
VMA22	YHR060W	DIB1	Q06819	143 aa	Predicted RBP	3.77	□□□□□ -1.81
VMA22	YHR060W	ABP140	Q08641	628 aa	Known RBP	3.77	□□□□□ -1.81
VMA22	YHR060W	FRE8	Q12209	686 aa		3.77	□□□□□ -1.81
VMA22	YHR060W	POX1	P13711	748 aa		3.76	□□□□□ -1.81
VMA22	YHR060W	YMR31	P19955	123 aa		3.76	□□□□□ -1.81
VMA22	YHR060W	POF1	P25576	258 aa		3.76	□□□□□ -1.81
VMA22	YHR060W	CPR3	P25719	182 aa		3.76	□□□□□ -1.81
VMA22	YHR060W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	3.76	□□□□□ -1.81	not detected
VMA22	YHR060W	URA10	P30402	227 aa		3.76	□□□□□ -1.81
VMA22	YHR060W	SPT4	P32914	102 aa	Predicted RBP	3.76	□□□□□ -1.81
VMA22	YHR060W	SDH3	P33421	198 aa		3.76	□□□□□ -1.81
VMA22	YHR060W	ASK1	P35734	292 aa		3.76	□□□□□ -1.81
VMA22	YHR060W	RPH1	P39956	796 aa		3.76	□□□□□ -1.81
VMA22	YHR060W	YIL152W	P40455	235 aa		3.76	□□□□□ -1.81
VMA22	YHR060W	RPR2	P40571	144 aa		3.76	□□□□□ -1.81
VMA22	YHR060W	MOB2	P43563	287 aa		3.76	□□□□□ -1.81
VMA22	YHR060W	USE1	P53146	245 aa		3.76	□□□□□ -1.81
VMA22	YHR060W	ASI3	P53983	676 aa		3.76	□□□□□ -1.81
VMA22	YHR060W	DIG1	Q03063	452 aa	Known RBP	3.76	□□□□□ -1.81
VMA22	YHR060W	TAF9	Q05027	157 aa		3.76	□□□□□ -1.81
VMA22	YHR060W	YLR446W	Q06204	433 aa		3.76	□□□□□ -1.81
VMA22	YHR060W	RSA1	Q08932	381 aa		3.76	□□□□□ -1.81
VMA22	YHR060W	SRO7	Q12038	1033 aa		3.76	□□□□□ -1.81
VMA22	YHR060W	TMS1	Q12116	473 aa		3.76	□□□□□ -1.81
VMA22	YHR060W	YDL199C	Q12407	687 aa		3.76	□□□□□ -1.81
VMA22	YHR060W	RPL15A	P05748	204 aa	Known RBP	3.75	□□□□□ -1.81
VMA22	YHR060W	CBF1	P17106	351 aa		3.75	□□□□□ -1.81
VMA22	YHR060W	RPB5	P20434	215 aa		3.75	□□□□□ -1.81
VMA22	YHR060W	CMK2	P22517	447 aa		3.75	□□□□□ -1.81
VMA22	YHR060W	ATP7	P30902	174 aa		3.75	□□□□□ -1.81
VMA22	YHR060W	MRPL10	P36520	322 aa		3.75	□□□□□ -1.81
VMA22	YHR060W	FZO1	P38297	855 aa		3.75	□□□□□ -1.81
VMA22	YHR060W	ARC40	P38328	384 aa	Known RBP	3.75	□□□□□ -1.81
VMA22	YHR060W	NDT80	P38830	627 aa		3.75	□□□□□ -1.81
VMA22	YHR060W	MDM31	P38880	579 aa		3.75	□□□□□ -1.81
VMA22	YHR060W	FRT2	P39734	528 aa		3.75	□□□□□ -1.81
VMA22	YHR060W	ERG28	P40030	148 aa		3.75	□□□□□ -1.81
VMA22	YHR060W	YIL001W	P40560	513 aa		3.75	□□□□□ -1.81
VMA22	YHR060W	SNM1	P40993	198 aa		3.75	□□□□□ -1.81
VMA22	YHR060W	SAD1	P43589	448 aa		3.75	□□□□□ -1.81
VMA22	YHR060W	VEL1	P53058	206 aa		3.75	□□□□□ -1.81
VMA22	YHR060W	GET1	P53192	235 aa		3.75	□□□□□ -1.81
VMA22	YHR060W	VHT1	P53241	593 aa		3.75	□□□□□ -1.81
VMA22	YHR060W	ESA1	Q08649	445 aa		3.75	□□□□□ -1.81
VMA22	YHR060W	YPL245W	Q12179	454 aa	Known RBP	3.75	□□□□□ -1.81
VMA22	YHR060W	LAG2	Q92325	660 aa		3.75	□□□□□ -1.81
VMA22	YHR060W	TRP1	P00912	224 aa		3.74	□□□□□ -1.81
VMA22	YHR060W	HHF1	P02309	103 aa	Known RBP	3.74	□□□□□ -1.81
VMA22	YHR060W	MRS3	P10566	314 aa		3.74	□□□□□ -1.81
VMA22	YHR060W	MIR1	P23641	311 aa	Known RBP	3.74	□□□□□ -1.81
VMA22	YHR060W	RNA14	P25298	677 aa	Known RBP	3.74	□□□□□ -1.81
VMA22	YHR060W	YPC1	P38298	316 aa		3.74	□□□□□ -1.81
VMA22	YHR060W	RTC3	P38804	111 aa	Predicted RBP	3.74	□□□□□ -1.81
VMA22	YHR060W	MET30	P39014	640 aa		3.74	□□□□□ -1.81
VMA22	YHR060W	YHB1	P39676	399 aa	Known RBP	3.74	□□□□□ -1.81
VMA22	YHR060W	SEC72	P39742	193 aa	Known RBP	3.74	□□□□□ -1.81
VMA22	YHR060W	YNL208W	P40159	199 aa	Known RBP	3.74	□□□□□ -1.81
VMA22	YHR060W	PRM5	P40476	318 aa		3.74	□□□□□ -1.81
VMA22	YHR060W	AIM23	P47015	356 aa		3.74	□□□□□ -1.81
VMA22	YHR060W	MAL13	P53338	473 aa		3.74	□□□□□ -1.81
VMA22	YHR060W	MSO1	P53604	210 aa	Known RBP	3.74	□□□□□ -1.81
VMA22	YHR060W	SUR7	P54003	302 aa		3.74	□□□□□ -1.81
VMA22	YHR060W	FSH2	Q05015	223 aa		3.74	□□□□□ -1.81
VMA22	YHR060W	SEC10	Q06245	871 aa		3.74	□□□□□ -1.81
VMA22	YHR060W	RPN8	Q08723	338 aa	Known RBP	3.74	□□□□□ -1.81
VMA22	YHR060W	SLM3	Q12093	417 aa		3.74	□□□□□ -1.81
VMA22	YHR060W	YCT1	Q12235	531 aa		3.74	□□□□□ -1.81
VMA22	YHR060W	ICT1	Q12385	394 aa		3.74	□□□□□ -1.81
VMA22	YHR060W	YKL183C-A	Q3E765	70 aa		3.74	□□□□□ -1.81
VMA22	YHR060W	MHP1	P43638	1398 aa		3.74	□□□□□ -1.81
VMA22	YHR060W	RAD9	P14737	1309 aa		3.73	□□□□□ -1.81
VMA22	YHR060W	TCP1	P12612	559 aa	Known RBP	3.73	□□□□□ -1.81
VMA22	YHR060W	SPS100	P13130	326 aa		3.73	□□□□□ -1.81
VMA22	YHR060W	MSI1	P13712	422 aa		3.73	□□□□□ -1.81
VMA22	YHR060W	PEX3	P28795	441 aa		3.73	□□□□□ -1.81
VMA22	YHR060W	HOM6	P31116	359 aa	Known RBP	3.73	□□□□□ -1.81
VMA22	YHR060W	QRI5	P32344	111 aa		3.73	□□□□□ -1.81
VMA22	YHR060W	ALK2	P32789	676 aa	Predicted RBP	3.73	□□□□□ -1.81
VMA22	YHR060W	TRM5	P38793	499 aa		3.73	□□□□□ -1.81
VMA22	YHR060W	YAT2	P40017	923 aa		3.73	□□□□□ -1.81
VMA22	YHR060W	YNL194C	P40169	301 aa		3.73	□□□□□ -1.81
VMA22	YHR060W	DSN1	P40568	576 aa		3.73	□□□□□ -1.81
VMA22	YHR060W	YJL213W	P40896	331 aa		3.73	□□□□□ -1.81
VMA22	YHR060W	YFR057W	P43625	151 aa		3.73	□□□□□ -1.81
VMA22	YHR060W	HSH155	P49955	971 aa	Known RBP	3.73	□□□□□ -1.81
VMA22	YHR060W	RMR1	P53060	241 aa		3.73	□□□□□ -1.81
VMA22	YHR060W	COG7	P53195	279 aa		3.73	□□□□□ -1.81
VMA22	YHR060W	PEX31	P53203	462 aa		3.73	□□□□□ -1.81
VMA22	YHR060W	SHY1	P53266	389 aa		3.73	□□□□□ -1.81
VMA22	YHR060W	CWC25	P53854	179 aa	Known RBP	3.73	□□□□□ -1.81
VMA22	YHR060W	YNL095C	P53932	642 aa		3.73	□□□□□ -1.81
VMA22	YHR060W	EBS1	Q03466	884 aa	Known RBP	3.73	□□□□□ -1.81
VMA22	YHR060W	GMC1	Q04399	608 aa		3.73	□□□□□ -1.81
VMA22	YHR060W	GIM5	Q04493	163 aa		3.73	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 35 ms