RNA–Protein interactions for RNA: YHR052W

CIC1, Transcript of Essential protein that interacts with proteasome components, yeastyeast

Gene CIC1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIC1YHR052W PES4P39684 611 aa1.58□□□□□ -2.16
CIC1YHR052W NBP1P52919 319 aaPredicted RBP1.58□□□□□ -2.16
CIC1YHR052W LIF1P53150 421 aa1.58□□□□□ -2.16
CIC1YHR052W SSU72P53538 206 aaPredicted RBP1.58□□□□□ -2.16
CIC1YHR052W PRR2Q12310 699 aa1.58□□□□□ -2.16
CIC1YHR052W ZWF1P11412 505 aaKnown RBP1.57□□□□□ -2.16
CIC1YHR052W YCR025CP25352 136 aa1.57□□□□□ -2.16
CIC1YHR052W POT1P27796 417 aaKnown RBP RIP-Chip data1.57□□□□□ -2.16not detected
CIC1YHR052W YBR062CP38239 180 aa1.57□□□□□ -2.16
CIC1YHR052W SIF2P38262 535 aa1.57□□□□□ -2.16
CIC1YHR052W YIL012WP40551 113 aa1.57□□□□□ -2.16
CIC1YHR052W YGR016WP53209 190 aa1.57□□□□□ -2.16
CIC1YHR052W YGR266WP53326 701 aa1.57□□□□□ -2.16
CIC1YHR052W IRC4Q03036 179 aa1.57□□□□□ -2.16
CIC1YHR052W PLB3Q08108 686 aa1.57□□□□□ -2.16
CIC1YHR052W CLB6P32943 380 aa1.56□□□□□ -2.16
CIC1YHR052W SYS1P41544 203 aa1.56□□□□□ -2.16
CIC1YHR052W YFL064CP43540 174 aa1.56□□□□□ -2.16
CIC1YHR052W MIG2P53035 382 aa1.56□□□□□ -2.16
CIC1YHR052W YGR168CP53293 376 aa1.56□□□□□ -2.16
CIC1YHR052W PDR16P53860 351 aaKnown RBP1.56□□□□□ -2.16
CIC1YHR052W ALG9P53868 555 aaKnown RBP1.56□□□□□ -2.16
CIC1YHR052W RCF1Q03713 159 aa1.56□□□□□ -2.16
CIC1YHR052W SNX41Q04053 625 aa1.56□□□□□ -2.16
CIC1YHR052W PML1Q07930 204 aaPredicted RBP1.56□□□□□ -2.16
CIC1YHR052W YPL278CQ08990 100 aa1.56□□□□□ -2.16
CIC1YHR052W YOR283WQ12040 230 aaKnown RBP1.56□□□□□ -2.16
CIC1YHR052W NFI1Q12216 726 aa1.56□□□□□ -2.16
CIC1YHR052W DCP1Q12517 231 aaPredicted RBP1.56□□□□□ -2.16
CIC1YHR052W HIS3P06633 220 aa1.55□□□□□ -2.16
CIC1YHR052W GCG1P32656 232 aaKnown RBP1.55□□□□□ -2.16
CIC1YHR052W CDC13P32797 924 aaKnown RBP1.55□□□□□ -2.16
CIC1YHR052W YHR035WP38769 630 aa1.55□□□□□ -2.16
CIC1YHR052W LIN1P38852 340 aaPredicted RBP1.55□□□□□ -2.16
CIC1YHR052W INA22P40576 216 aa1.55□□□□□ -2.16
CIC1YHR052W PIR5P46999 287 aa1.55□□□□□ -2.16
CIC1YHR052W CGI121Q03705 181 aaKnown RBP1.55□□□□□ -2.16
CIC1YHR052W YLR446WQ06204 433 aa1.55□□□□□ -2.16
CIC1YHR052W RNR2P09938 399 aaKnown RBP1.54□□□□□ -2.16
CIC1YHR052W PHO80P20052 293 aa1.54□□□□□ -2.16
CIC1YHR052W IFM1P25038 676 aa1.54□□□□□ -2.16
CIC1YHR052W MCH2P36032 473 aa1.54□□□□□ -2.16
CIC1YHR052W MRPL3P36516 390 aa1.54□□□□□ -2.16
CIC1YHR052W PRP24P49960 444 aaKnown RBP1.54□□□□□ -2.16
CIC1YHR052W RSM27P53305 110 aa1.54□□□□□ -2.16
CIC1YHR052W YDL144CQ07589 356 aa1.54□□□□□ -2.16
CIC1YHR052W VPS68Q12016 184 aa1.54□□□□□ -2.16
CIC1YHR052W UTP23Q12339 254 aaKnown RBP1.54□□□□□ -2.16
CIC1YHR052W YEL043WP32618 956 aa1.53□□□□□ -2.16
CIC1YHR052W TPO5P36029 618 aa1.53□□□□□ -2.16
CIC1YHR052W TRM7P38238 310 aaKnown RBP1.53□□□□□ -2.16
CIC1YHR052W BAT2P47176 376 aaKnown RBP1.53□□□□□ -2.16
CIC1YHR052W OKP1P53298 406 aa1.53□□□□□ -2.16
CIC1YHR052W SPT7P35177 1332 aa1.52□□□□□ -2.17
CIC1YHR052W RPL26AP05743 127 aaKnown RBP1.52□□□□□ -2.17
CIC1YHR052W OPI1P21957 404 aa1.52□□□□□ -2.17
CIC1YHR052W IMP1P28627 190 aa1.52□□□□□ -2.17
CIC1YHR052W SWI3P32591 825 aa1.52□□□□□ -2.17
CIC1YHR052W ZRT1P32804 376 aa1.52□□□□□ -2.17
CIC1YHR052W YKL162CP36052 402 aa1.52□□□□□ -2.17
CIC1YHR052W YPC1P38298 316 aa1.52□□□□□ -2.17
CIC1YHR052W AVT6P40074 448 aa1.52□□□□□ -2.17
CIC1YHR052W DSK2P48510 373 aa1.52□□□□□ -2.17
CIC1YHR052W RPL26BP53221 127 aaKnown RBP1.52□□□□□ -2.17
CIC1YHR052W BIO4P53630 237 aa1.52□□□□□ -2.17
CIC1YHR052W NNT1Q05874 261 aa1.52□□□□□ -2.17
CIC1YHR052W PSY3Q12318 242 aa1.52□□□□□ -2.17
CIC1YHR052W AGC1Q12482 902 aa1.52□□□□□ -2.17
CIC1YHR052W PAN1P32521 1480 aa1.51□□□□□ -2.17
CIC1YHR052W GAL3P13045 520 aa1.51□□□□□ -2.17
CIC1YHR052W RRT12P25381 491 aa1.51□□□□□ -2.17
CIC1YHR052W KRR1P25586 316 aaPredicted RBP1.51□□□□□ -2.17
CIC1YHR052W APE4P38821 490 aa1.51□□□□□ -2.17
CIC1YHR052W VAB2P40003 282 aa1.51□□□□□ -2.17
CIC1YHR052W YJR141WP47172 347 aaPredicted RBP1.51□□□□□ -2.17
CIC1YHR052W TVP15Q03860 143 aa1.51□□□□□ -2.17
CIC1YHR052W RDS3Q06835 107 aaPredicted RBP1.51□□□□□ -2.17
CIC1YHR052W GAL7P08431 366 aa1.5□□□□□ -2.17
CIC1YHR052W RPL18AP0CX49 186 aaKnown RBP1.5□□□□□ -2.17
CIC1YHR052W RPL18BP0CX50 186 aaKnown RBP1.5□□□□□ -2.17
CIC1YHR052W TPM1P17536 199 aaKnown RBP1.5□□□□□ -2.17
CIC1YHR052W RPL16BP26785 198 aaKnown RBP1.5□□□□□ -2.17
CIC1YHR052W IMP3P32899 183 aaPredicted RBP1.5□□□□□ -2.17
CIC1YHR052W EBP2P36049 427 aaKnown RBP1.5□□□□□ -2.17
CIC1YHR052W MBA1P38300 278 aa1.5□□□□□ -2.17
CIC1YHR052W UTP25P40498 721 aaKnown RBP1.5□□□□□ -2.17
CIC1YHR052W YJR146WP47174 117 aa1.5□□□□□ -2.17
CIC1YHR052W DAN1P47178 298 aa1.5□□□□□ -2.17
CIC1YHR052W UBC13P52490 153 aa1.5□□□□□ -2.17
CIC1YHR052W STE23Q06010 1027 aa1.5□□□□□ -2.17
CIC1YHR052W ATG5Q12380 294 aa1.5□□□□□ -2.17
CIC1YHR052W VMA2P16140 517 aaKnown RBP1.49□□□□□ -2.17
CIC1YHR052W SCO1P23833 295 aa1.49□□□□□ -2.17
CIC1YHR052W NRG2P38082 220 aa1.49□□□□□ -2.17
CIC1YHR052W CAJ1P39101 391 aa1.49□□□□□ -2.17
CIC1YHR052W KRE29P40026 464 aa1.49□□□□□ -2.17
CIC1YHR052W TPN1P53099 579 aa1.49□□□□□ -2.17
CIC1YHR052W SWC4P53201 476 aa1.49□□□□□ -2.17
CIC1YHR052W YMR166CQ03829 368 aa1.49□□□□□ -2.17
CIC1YHR052W MGR3Q04472 501 aa1.49□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms