RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W RPN13O13563 156 aa4.89□□□□□ -1.63
SHE10YGL228W OPI3P05375 206 aa4.89□□□□□ -1.63
SHE10YGL228W PEP4P07267 405 aaKnown RBP4.89□□□□□ -1.63
SHE10YGL228W RPA135P22138 1203 aaKnown RBP4.89□□□□□ -1.63
SHE10YGL228W AIM17P23180 465 aaKnown RBP4.89□□□□□ -1.63
SHE10YGL228W ERG4P25340 473 aa4.89□□□□□ -1.63
SHE10YGL228W FUN19P28003 413 aaPredicted RBP4.89□□□□□ -1.63
SHE10YGL228W PUP2P32379 260 aa4.89□□□□□ -1.63
SHE10YGL228W HIS7P33734 552 aaKnown RBP4.89□□□□□ -1.63
SHE10YGL228W SDS22P36047 338 aa4.89□□□□□ -1.63
SHE10YGL228W YKR073CP36153 106 aa4.89□□□□□ -1.63
SHE10YGL228W YBR063CP38083 404 aa4.89□□□□□ -1.63
SHE10YGL228W FMP23P38231 175 aa4.89□□□□□ -1.63
SHE10YGL228W SHO1P40073 367 aa4.89□□□□□ -1.63
SHE10YGL228W PHB1P40961 287 aa4.89□□□□□ -1.63
SHE10YGL228W RAI1P53063 387 aaKnown RBP4.89□□□□□ -1.63
SHE10YGL228W ASI3P53983 676 aa4.89□□□□□ -1.63
SHE10YGL228W NOG1Q02892 647 aaKnown RBP4.89□□□□□ -1.63
SHE10YGL228W UTP21Q06078 939 aaPredicted RBP4.89□□□□□ -1.63
SHE10YGL228W YPR147CQ06522 304 aaKnown RBP4.89□□□□□ -1.63
SHE10YGL228W IPK1Q06667 281 aa4.89□□□□□ -1.63
SHE10YGL228W NGL1Q08213 363 aaKnown RBP4.89□□□□□ -1.63
SHE10YGL228W PEX27Q08580 376 aa4.89□□□□□ -1.63
SHE10YGL228W SOG2Q08817 791 aa4.89□□□□□ -1.63
SHE10YGL228W YOR378WQ08902 515 aa4.89□□□□□ -1.63
SHE10YGL228W YPL278CQ08990 100 aa4.89□□□□□ -1.63
SHE10YGL228W MED2Q12124 431 aa4.89□□□□□ -1.63
SHE10YGL228W MSH5Q12175 901 aa4.89□□□□□ -1.63
SHE10YGL228W MSL5Q12186 476 aaKnown RBP RIP-Chip data4.89□□□□□ -1.63not detected
SHE10YGL228W HMS1Q12398 434 aa4.89□□□□□ -1.63
SHE10YGL228W DCP1Q12517 231 aaPredicted RBP4.89□□□□□ -1.63
SHE10YGL228W YAL064W-BO13512 126 aa4.89□□□□□ -1.63
SHE10YGL228W SIR2P06700 562 aa4.89□□□□□ -1.63
SHE10YGL228W PDE2P06776 526 aa4.89□□□□□ -1.63
SHE10YGL228W STE12P13574 688 aa4.89□□□□□ -1.63
SHE10YGL228W BOS1P25385 244 aa4.89□□□□□ -1.63
SHE10YGL228W PUT3P25502 979 aaPredicted RBP4.89□□□□□ -1.63
SHE10YGL228W FUN26P31381 517 aa4.89□□□□□ -1.63
SHE10YGL228W NUD1P32336 851 aa4.89□□□□□ -1.63
SHE10YGL228W PDR3P33200 976 aa4.89□□□□□ -1.63
SHE10YGL228W ZRT3P34240 503 aa4.89□□□□□ -1.63
SHE10YGL228W MTC2P34246 357 aa4.89□□□□□ -1.63
SHE10YGL228W RSM22P36056 628 aa4.89□□□□□ -1.63
SHE10YGL228W KAE1P36132 386 aa4.89□□□□□ -1.63
SHE10YGL228W APD1P38281 316 aa4.89□□□□□ -1.63
SHE10YGL228W AMN1P38285 549 aaPredicted RBP4.89□□□□□ -1.63
SHE10YGL228W VBA2P38358 474 aaKnown RBP4.89□□□□□ -1.63
SHE10YGL228W MLH1P38920 769 aa4.89□□□□□ -1.63
SHE10YGL228W RFC4P40339 323 aaKnown RBP4.89□□□□□ -1.63
SHE10YGL228W GDS1P41913 522 aa4.89□□□□□ -1.63
SHE10YGL228W PRY1P47032 299 aa4.89□□□□□ -1.63
SHE10YGL228W IMO32P53219 342 aa4.89□□□□□ -1.63
SHE10YGL228W PBP1P53297 722 aaKnown RBP4.89□□□□□ -1.63
SHE10YGL228W PAU12P53343 120 aa4.89□□□□□ -1.63
SHE10YGL228W NUP116Q02630 1113 aa4.89□□□□□ -1.63
SHE10YGL228W SDC1Q03323 175 aa4.89□□□□□ -1.63
SHE10YGL228W RSM24Q03976 319 aa4.89□□□□□ -1.63
SHE10YGL228W AIM6Q07716 390 aa4.89□□□□□ -1.63
SHE10YGL228W HNT3Q08702 217 aa4.89□□□□□ -1.63
SHE10YGL228W YLR099W-AQ3E798 87 aa4.89□□□□□ -1.63
SHE10YGL228W MTR10Q99189 972 aa4.89□□□□□ -1.63
SHE10YGL228W YBR056W-AI2HB52 66 aa4.88□□□□□ -1.63
SHE10YGL228W RPS13P05756 151 aaKnown RBP4.88□□□□□ -1.63
SHE10YGL228W YFR010W-AP0C5N0 62 aa4.88□□□□□ -1.63
SHE10YGL228W YGL041W-AP0C5N3 154 aa4.88□□□□□ -1.63
SHE10YGL228W SEC62P21825 274 aa4.88□□□□□ -1.63
SHE10YGL228W MDH2P22133 377 aa4.88□□□□□ -1.63
SHE10YGL228W PRE7P23724 241 aaKnown RBP4.88□□□□□ -1.63
SHE10YGL228W EXG1P23776 448 aaKnown RBP4.88□□□□□ -1.63
SHE10YGL228W NFS1P25374 497 aa4.88□□□□□ -1.63
SHE10YGL228W NPL6P32832 435 aa4.88□□□□□ -1.63
SHE10YGL228W PAU24P38155 120 aa4.88□□□□□ -1.63
SHE10YGL228W YHK8P38776 514 aa4.88□□□□□ -1.63
SHE10YGL228W PTH1P38876 190 aaKnown RBP4.88□□□□□ -1.63
SHE10YGL228W YPL039WQ03080 316 aa4.88□□□□□ -1.63
SHE10YGL228W RCF1Q03713 159 aa4.88□□□□□ -1.63
SHE10YGL228W MSS11Q03825 758 aa4.88□□□□□ -1.63
SHE10YGL228W BNA7Q04066 261 aa4.88□□□□□ -1.63
SHE10YGL228W MRPL51Q06090 140 aaPredicted RBP4.88□□□□□ -1.63
SHE10YGL228W NMA1Q06178 401 aaKnown RBP4.88□□□□□ -1.63
SHE10YGL228W TIR4Q12218 487 aaPredicted RBP4.88□□□□□ -1.63
SHE10YGL228W TY1A-BLQ12266 440 aa4.88□□□□□ -1.63
SHE10YGL228W FRE6Q12473 712 aa4.88□□□□□ -1.63
SHE10YGL228W STE18P18852 110 aa4.87□□□□□ -1.63
SHE10YGL228W ATS1P31386 333 aa4.87□□□□□ -1.63
SHE10YGL228W MCM10P32354 571 aa4.87□□□□□ -1.63
SHE10YGL228W POP1P41812 875 aa4.87□□□□□ -1.63
SHE10YGL228W PMT6P42934 759 aa4.87□□□□□ -1.63
SHE10YGL228W MRH4P53166 561 aa4.87□□□□□ -1.63
SHE10YGL228W HOL1P53389 586 aa4.87□□□□□ -1.63
SHE10YGL228W PDR16P53860 351 aaKnown RBP4.87□□□□□ -1.63
SHE10YGL228W PET191Q02772 108 aa4.87□□□□□ -1.63
SHE10YGL228W YDR102CQ03864 110 aa4.87□□□□□ -1.63
SHE10YGL228W VBA4Q04602 768 aaKnown RBP4.87□□□□□ -1.63
SHE10YGL228W CTS2Q06350 511 aa4.87□□□□□ -1.63
SHE10YGL228W YPR1Q12458 312 aa4.87□□□□□ -1.63
SHE10YGL228W STE50P25344 346 aa4.86□□□□□ -1.63
SHE10YGL228W THI4P32318 326 aa4.86□□□□□ -1.63
SHE10YGL228W ZUO1P32527 433 aaKnown RBP4.86□□□□□ -1.63
SHE10YGL228W YBR137WP38276 179 aa4.86□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms