RNA–Protein interactions for RNA: YGL098W

USE1, Transcript of Essential SNARE protein localized to the ER, yeastyeast

Gene USE1, Length 738 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USE1YGL098W ADH2P00331 348 aaKnown RBP3.04□□□□□ -1.92
USE1YGL098W STF1P01098 86 aa3.04□□□□□ -1.92
USE1YGL098W SIR2P06700 562 aa3.04□□□□□ -1.92
USE1YGL098W CBP1P07252 654 aa3.04□□□□□ -1.92
USE1YGL098W RPS4AP0CX35 261 aaKnown RBP3.04□□□□□ -1.92
USE1YGL098W RPS4BP0CX36 261 aaKnown RBP3.04□□□□□ -1.92
USE1YGL098W NHP6AP11632 93 aaKnown RBP3.04□□□□□ -1.92
USE1YGL098W BUD5P25300 642 aaPredicted RBP3.04□□□□□ -1.92
USE1YGL098W KIN82P25341 720 aa3.04□□□□□ -1.92
USE1YGL098W PET18P25362 215 aa3.04□□□□□ -1.92
USE1YGL098W MRP17P28778 131 aa3.04□□□□□ -1.92
USE1YGL098W SUA7P29055 345 aaPredicted RBP3.04□□□□□ -1.92
USE1YGL098W SEC17P32602 292 aa3.04□□□□□ -1.92
USE1YGL098W SNC2P33328 115 aa3.04□□□□□ -1.92
USE1YGL098W TSA1P34760 196 aaKnown RBP3.04□□□□□ -1.92
USE1YGL098W MRPL11P36521 249 aaPredicted RBP3.04□□□□□ -1.92
USE1YGL098W YBR284WP38150 797 aa3.04□□□□□ -1.92
USE1YGL098W FUI1P38196 639 aa3.04□□□□□ -1.92
USE1YGL098W AME1P38313 324 aa3.04□□□□□ -1.92
USE1YGL098W MTC4P38335 694 aaKnown RBP3.04□□□□□ -1.92
USE1YGL098W CUE1P38428 203 aa3.04□□□□□ -1.92
USE1YGL098W DBP8P38719 431 aa3.04□□□□□ -1.92
USE1YGL098W ARO9P38840 513 aaPredicted RBP3.04□□□□□ -1.92
USE1YGL098W MNL1P38888 796 aa3.04□□□□□ -1.92
USE1YGL098W PRP39P39682 629 aaKnown RBP3.04□□□□□ -1.92
USE1YGL098W NPP2P39997 493 aa3.04□□□□□ -1.92
USE1YGL098W FAU1P40099 211 aa3.04□□□□□ -1.92
USE1YGL098W AYR1P40471 297 aa3.04□□□□□ -1.92
USE1YGL098W EMC5P40540 141 aa3.04□□□□□ -1.92
USE1YGL098W SKP2P42843 763 aa3.04□□□□□ -1.92
USE1YGL098W BIT61P47041 543 aa3.04□□□□□ -1.92
USE1YGL098W YJR012CP47087 207 aa3.04□□□□□ -1.92
USE1YGL098W BUL1P48524 976 aa3.04□□□□□ -1.92
USE1YGL098W YGL204CP53089 101 aa3.04□□□□□ -1.92
USE1YGL098W YGL114WP53134 725 aa3.04□□□□□ -1.92
USE1YGL098W DUS1P53759 423 aaKnown RBP3.04□□□□□ -1.92
USE1YGL098W YPL067CQ02754 198 aa3.04□□□□□ -1.92
USE1YGL098W VPS28Q02767 242 aa3.04□□□□□ -1.92
USE1YGL098W GIM5Q04493 163 aa3.04□□□□□ -1.92
USE1YGL098W GSF2Q04697 403 aaKnown RBP3.04□□□□□ -1.92
USE1YGL098W YLR179CQ06252 201 aaKnown RBP3.04□□□□□ -1.92
USE1YGL098W NOC4Q06512 552 aaPredicted RBP3.04□□□□□ -1.92
USE1YGL098W YPR147CQ06522 304 aaKnown RBP3.04□□□□□ -1.92
USE1YGL098W THI13Q07748 340 aa3.04□□□□□ -1.92
USE1YGL098W NRT1Q08485 598 aa3.04□□□□□ -1.92
USE1YGL098W RDR1Q08904 546 aa3.04□□□□□ -1.92
USE1YGL098W MMT2Q08970 484 aa3.04□□□□□ -1.92
USE1YGL098W GPM2Q12008 311 aa3.04□□□□□ -1.92
USE1YGL098W SRO7Q12038 1033 aa3.04□□□□□ -1.92
USE1YGL098W YLR049CQ12110 428 aa3.04□□□□□ -1.92
USE1YGL098W TPO4Q12256 659 aa3.04□□□□□ -1.92
USE1YGL098W TRM13Q12383 476 aa3.04□□□□□ -1.92
USE1YGL098W AHA1Q12449 350 aaKnown RBP3.04□□□□□ -1.92
USE1YGL098W WIP1Q2V2P8 89 aa3.04□□□□□ -1.92
USE1YGL098W CYC7P00045 113 aa3.03□□□□□ -1.92
USE1YGL098W INH1P01097 85 aa3.03□□□□□ -1.92
USE1YGL098W GAL4P04386 881 aa3.03□□□□□ -1.92
USE1YGL098W ERG20P08524 352 aaKnown RBP3.03□□□□□ -1.92
USE1YGL098W YML003WP0CF16 290 aa3.03□□□□□ -1.92
USE1YGL098W YOL163WP0CF20 169 aa3.03□□□□□ -1.92
USE1YGL098W PDA1P16387 420 aaKnown RBP3.03□□□□□ -1.92
USE1YGL098W SPO7P18410 259 aa3.03□□□□□ -1.92
USE1YGL098W SNF5P18480 905 aa3.03□□□□□ -1.92
USE1YGL098W TRX2P22803 104 aaKnown RBP3.03□□□□□ -1.92
USE1YGL098W GRX1P25373 110 aaKnown RBP3.03□□□□□ -1.92
USE1YGL098W IMG1P25626 169 aa3.03□□□□□ -1.92
USE1YGL098W OAC1P32332 324 aa3.03□□□□□ -1.92
USE1YGL098W HMX1P32339 317 aa3.03□□□□□ -1.92
USE1YGL098W STE14P32584 239 aa3.03□□□□□ -1.92
USE1YGL098W TRS65P32893 560 aa3.03□□□□□ -1.92
USE1YGL098W MSN2P33748 704 aa3.03□□□□□ -1.92
USE1YGL098W TGL1P34163 548 aa3.03□□□□□ -1.92
USE1YGL098W SFK1P35735 353 aa3.03□□□□□ -1.92
USE1YGL098W YKL069WP36088 180 aa3.03□□□□□ -1.92
USE1YGL098W IRS4P36115 615 aaKnown RBP3.03□□□□□ -1.92
USE1YGL098W POA1P38218 177 aa3.03□□□□□ -1.92
USE1YGL098W TSL1P38427 1098 aaKnown RBP3.03□□□□□ -1.92
USE1YGL098W YHR033WP38690 423 aa3.03□□□□□ -1.92
USE1YGL098W EFM1P38732 585 aa3.03□□□□□ -1.92
USE1YGL098W GIP2P40036 548 aa3.03□□□□□ -1.92
USE1YGL098W FLX1P40464 311 aa3.03□□□□□ -1.92
USE1YGL098W ICE2P40499 491 aa3.03□□□□□ -1.92
USE1YGL098W PAU15P40585 124 aa3.03□□□□□ -1.92
USE1YGL098W OPT1P40897 799 aa3.03□□□□□ -1.92
USE1YGL098W MOB2P43563 287 aa3.03□□□□□ -1.92
USE1YGL098W YAR1P46683 200 aa3.03□□□□□ -1.92
USE1YGL098W TAX4P47030 604 aa3.03□□□□□ -1.92
USE1YGL098W NNF1P47149 201 aa3.03□□□□□ -1.92
USE1YGL098W YJR154WP47181 346 aa3.03□□□□□ -1.92
USE1YGL098W FAA4P47912 694 aaKnown RBP3.03□□□□□ -1.92
USE1YGL098W SOL1P50278 321 aa3.03□□□□□ -1.92
USE1YGL098W PUS2P53167 370 aa3.03□□□□□ -1.92
USE1YGL098W MTL1P53214 551 aa3.03□□□□□ -1.92
USE1YGL098W RPT4P53549 437 aaKnown RBP3.03□□□□□ -1.92
USE1YGL098W BUD17P53727 317 aa3.03□□□□□ -1.92
USE1YGL098W FRE4P53746 719 aa3.03□□□□□ -1.92
USE1YGL098W YNR061CP53747 219 aa3.03□□□□□ -1.92
USE1YGL098W TPS1Q00764 495 aaKnown RBP3.03□□□□□ -1.92
USE1YGL098W CYT2Q00873 224 aa3.03□□□□□ -1.92
USE1YGL098W RSM23Q01163 450 aa3.03□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 89.3 ms