RNA–Protein interactions for RNA: YGL044C

RNA15, Transcript of Component of the cleavage and polyadenylation factor I (CF I), yeast

Gene RNA15, Length 891 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RNA15	YGL044C	SUS1	Q6WNK7	96 aa		4.11	□□□□□ -1.75
RNA15	YGL044C	CAR2	P07991	424 aa	Known RBP	4.1	□□□□□ -1.75
RNA15	YGL044C	RED1	P14291	827 aa		4.1	□□□□□ -1.75
RNA15	YGL044C	VPS33	P20795	691 aa		4.1	□□□□□ -1.75
RNA15	YGL044C	PRE7	P23724	241 aa	Known RBP	4.1	□□□□□ -1.75
RNA15	YGL044C	KRE6	P32486	720 aa		4.1	□□□□□ -1.75
RNA15	YGL044C	ECT1	P33412	323 aa		4.1	□□□□□ -1.75
RNA15	YGL044C	TUL1	P36096	758 aa		4.1	□□□□□ -1.75
RNA15	YGL044C	SRO77	P38163	1010 aa		4.1	□□□□□ -1.75
RNA15	YGL044C	YHK8	P38776	514 aa		4.1	□□□□□ -1.75
RNA15	YGL044C	BAT1	P38891	393 aa	Known RBP	4.1	□□□□□ -1.75
RNA15	YGL044C	YJL218W	P40892	196 aa	Known RBP	4.1	□□□□□ -1.75
RNA15	YGL044C	PFS2	P42841	465 aa	Known RBP	4.1	□□□□□ -1.75
RNA15	YGL044C	IRC18	P47056	224 aa		4.1	□□□□□ -1.75
RNA15	YGL044C	APS3	P47064	194 aa		4.1	□□□□□ -1.75
RNA15	YGL044C	CWC23	P52868	283 aa	Predicted RBP	4.1	□□□□□ -1.75
RNA15	YGL044C	YGL235W	P53071	178 aa		4.1	□□□□□ -1.75
RNA15	YGL044C	HOS2	P53096	452 aa	Predicted RBP	4.1	□□□□□ -1.75
RNA15	YGL044C	TPN1	P53099	579 aa		4.1	□□□□□ -1.75
RNA15	YGL044C	MKC7	P53379	596 aa		4.1	□□□□□ -1.75
RNA15	YGL044C	MEP3	P53390	489 aa		4.1	□□□□□ -1.75
RNA15	YGL044C	YAT1	P80235	687 aa		4.1	□□□□□ -1.75
RNA15	YGL044C	NUP116	Q02630	1113 aa		4.1	□□□□□ -1.75
RNA15	YGL044C	MSC1	Q03104	513 aa		4.1	□□□□□ -1.75
RNA15	YGL044C	PFA5	Q03289	374 aa		4.1	□□□□□ -1.75
RNA15	YGL044C	OST6	Q03723	332 aa		4.1	□□□□□ -1.75
RNA15	YGL044C	AIM36	Q03798	255 aa		4.1	□□□□□ -1.75
RNA15	YGL044C	SMA2	Q04658	369 aa		4.1	□□□□□ -1.75
RNA15	YGL044C	NAT4	Q04751	285 aa		4.1	□□□□□ -1.75
RNA15	YGL044C	ELP6	Q04868	273 aa		4.1	□□□□□ -1.75
RNA15	YGL044C	SNT309	Q06091	175 aa	Predicted RBP	4.1	□□□□□ -1.75
RNA15	YGL044C	ORM2	Q06144	216 aa		4.1	□□□□□ -1.75
RNA15	YGL044C	SYO1	Q07395	620 aa		4.1	□□□□□ -1.75
RNA15	YGL044C	LUC7	Q07508	261 aa	Predicted RBP	4.1	□□□□□ -1.75
RNA15	YGL044C	DAP1	Q12091	152 aa		4.1	□□□□□ -1.75
RNA15	YGL044C	YDL211C	Q12121	372 aa		4.1	□□□□□ -1.75
RNA15	YGL044C	PRS5	Q12265	496 aa	Known RBP	4.1	□□□□□ -1.75
RNA15	YGL044C	HSP42	Q12329	375 aa		4.1	□□□□□ -1.75
RNA15	YGL044C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
RNA15	YGL044C	SKS1	Q12505	502 aa		4.1	□□□□□ -1.75
RNA15	YGL044C	YOR019W	Q99248	730 aa		4.1	□□□□□ -1.75
RNA15	YGL044C	YEL009C-A	A0A023PZF2	135 aa		4.09	□□□□□ -1.75
RNA15	YGL044C	YOL162W	P0CF19	215 aa		4.09	□□□□□ -1.75
RNA15	YGL044C	PET122	P10355	254 aa		4.09	□□□□□ -1.75
RNA15	YGL044C	PRP2	P20095	876 aa	Predicted RBP	4.09	□□□□□ -1.75
RNA15	YGL044C	SNC1	P31109	117 aa		4.09	□□□□□ -1.75
RNA15	YGL044C	HYM1	P32464	399 aa		4.09	□□□□□ -1.75
RNA15	YGL044C	NDC1	P32500	655 aa		4.09	□□□□□ -1.75
RNA15	YGL044C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
RNA15	YGL044C	VPS51	P36116	164 aa		4.09	□□□□□ -1.75
RNA15	YGL044C	FMP46	P36141	133 aa	Known RBP	4.09	□□□□□ -1.75
RNA15	YGL044C	TRR2	P38816	342 aa		4.09	□□□□□ -1.75
RNA15	YGL044C	LYS1	P38998	373 aa	RIP-Chip data	4.09	□□□□□ -1.75	not detected
RNA15	YGL044C	GDI1	P39958	451 aa	Known RBP	4.09	□□□□□ -1.75
RNA15	YGL044C	LRO1	P40345	661 aa		4.09	□□□□□ -1.75
RNA15	YGL044C	SYG1	P40528	902 aa		4.09	□□□□□ -1.75
RNA15	YGL044C	RPL10	P41805	221 aa	Known RBP	4.09	□□□□□ -1.75
RNA15	YGL044C	BNA6	P43619	295 aa		4.09	□□□□□ -1.75
RNA15	YGL044C	ORM1	P53224	222 aa		4.09	□□□□□ -1.75
RNA15	YGL044C	CSL4	P53859	292 aa	Predicted RBP	4.09	□□□□□ -1.75
RNA15	YGL044C	YPL068C	Q02749	293 aa		4.09	□□□□□ -1.75
RNA15	YGL044C	HLR1	Q04429	423 aa		4.09	□□□□□ -1.75
RNA15	YGL044C	YLR173W	Q06247	608 aa		4.09	□□□□□ -1.75
RNA15	YGL044C	YOR365C	Q08844	703 aa		4.09	□□□□□ -1.75
RNA15	YGL044C	MMT2	Q08970	484 aa		4.09	□□□□□ -1.75
RNA15	YGL044C	PFA4	Q12006	378 aa		4.09	□□□□□ -1.75
RNA15	YGL044C	YOL114C	Q12322	202 aa		4.09	□□□□□ -1.75
RNA15	YGL044C	MEX67	Q99257	599 aa	Known RBP	4.09	□□□□□ -1.75
RNA15	YGL044C	DET1	Q99288	334 aa	Known RBP	4.09	□□□□□ -1.75
RNA15	YGL044C	STF2	P16965	84 aa		4.08	□□□□□ -1.76
RNA15	YGL044C	ITR1	P30605	584 aa		4.08	□□□□□ -1.76
RNA15	YGL044C	HOM6	P31116	359 aa	Known RBP	4.08	□□□□□ -1.76
RNA15	YGL044C	ARO7	P32178	256 aa		4.08	□□□□□ -1.76
RNA15	YGL044C	DOA4	P32571	926 aa		4.08	□□□□□ -1.76
RNA15	YGL044C	RML2	P32611	393 aa		4.08	□□□□□ -1.76
RNA15	YGL044C	VPS17	P32913	551 aa		4.08	□□□□□ -1.76
RNA15	YGL044C	SKN1	P33336	771 aa		4.08	□□□□□ -1.76
RNA15	YGL044C	ZRT3	P34240	503 aa		4.08	□□□□□ -1.76
RNA15	YGL044C	GPX1	P36014	167 aa		4.08	□□□□□ -1.76
RNA15	YGL044C	SNU114	P36048	1008 aa	Known RBP	4.08	□□□□□ -1.76
RNA15	YGL044C	SHE1	P38200	338 aa		4.08	□□□□□ -1.76
RNA15	YGL044C	MNL1	P38888	796 aa		4.08	□□□□□ -1.76
RNA15	YGL044C	FMC1	P40491	155 aa		4.08	□□□□□ -1.76
RNA15	YGL044C	YIL067C	P40514	678 aa		4.08	□□□□□ -1.76
RNA15	YGL044C	HIS6	P40545	261 aa		4.08	□□□□□ -1.76
RNA15	YGL044C	ATG18	P43601	500 aa		4.08	□□□□□ -1.76
RNA15	YGL044C	DUG1	P43616	481 aa	Known RBP	4.08	□□□□□ -1.76
RNA15	YGL044C	RPS0B	P46654	252 aa	Known RBP	4.08	□□□□□ -1.76
RNA15	YGL044C	PAU12	P53343	120 aa		4.08	□□□□□ -1.76
RNA15	YGL044C	YMR130W	Q04223	302 aa		4.08	□□□□□ -1.76
RNA15	YGL044C	YML096W	Q04489	525 aa		4.08	□□□□□ -1.76
RNA15	YGL044C	YPR127W	Q06494	345 aa		4.08	□□□□□ -1.76
RNA15	YGL044C	ASR1	Q06834	288 aa		4.08	□□□□□ -1.76
RNA15	YGL044C	SKI7	Q08491	747 aa	Predicted RBP	4.08	□□□□□ -1.76
RNA15	YGL044C	PEX27	Q08580	376 aa		4.08	□□□□□ -1.76
RNA15	YGL044C	REX3	Q12090	404 aa		4.08	□□□□□ -1.76
RNA15	YGL044C	YDR262W	Q12331	272 aa		4.08	□□□□□ -1.76
RNA15	YGL044C	YPR1	Q12458	312 aa		4.08	□□□□□ -1.76
RNA15	YGL044C	SIR2	P06700	562 aa		4.07	□□□□□ -1.76
RNA15	YGL044C	COX9	P07255	59 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms