RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W YPR063CQ12160 140 aa2.18□□□□□ -2.06
LOC1YFR001W IES3Q12345 250 aa2.18□□□□□ -2.06
LOC1YFR001W YPR1Q12458 312 aa2.18□□□□□ -2.06
LOC1YFR001W DCP1Q12517 231 aaPredicted RBP2.18□□□□□ -2.06
LOC1YFR001W LAG2Q92325 660 aa2.18□□□□□ -2.06
LOC1YFR001W VPH2P32341 215 aa2.17□□□□□ -2.06
LOC1YFR001W CSE1P33307 960 aa2.17□□□□□ -2.06
LOC1YFR001W YPC1P38298 316 aa2.17□□□□□ -2.06
LOC1YFR001W MED8P38304 223 aa2.17□□□□□ -2.06
LOC1YFR001W RIB4P50861 169 aaPredicted RBP2.17□□□□□ -2.06
LOC1YFR001W CSI1Q04368 295 aa2.17□□□□□ -2.06
LOC1YFR001W YMR111CQ04461 462 aaPredicted RBP2.17□□□□□ -2.06
LOC1YFR001W REX3Q12090 404 aa2.17□□□□□ -2.06
LOC1YFR001W RTC5Q12108 567 aaKnown RBP2.17□□□□□ -2.06
LOC1YFR001W CAR2P07991 424 aaKnown RBP2.16□□□□□ -2.06
LOC1YFR001W CDC42P19073 191 aa2.16□□□□□ -2.06
LOC1YFR001W SDH4P37298 181 aa2.16□□□□□ -2.06
LOC1YFR001W YDR089WP38966 869 aa2.16□□□□□ -2.06
LOC1YFR001W YFL064CP43540 174 aa2.16□□□□□ -2.06
LOC1YFR001W UBC13P52490 153 aa2.16□□□□□ -2.06
LOC1YFR001W UFD1P53044 361 aa2.16□□□□□ -2.06
LOC1YFR001W YGR266WP53326 701 aa2.16□□□□□ -2.06
LOC1YFR001W DBP6P53734 629 aaKnown RBP2.16□□□□□ -2.06
LOC1YFR001W YPL278CQ08990 100 aa2.16□□□□□ -2.06
LOC1YFR001W PFK27Q12471 397 aaPredicted RBP2.16□□□□□ -2.06
LOC1YFR001W YAL063C-AQ3E791 96 aa2.16□□□□□ -2.06
LOC1YFR001W RPL31AP0C2H8 113 aaKnown RBP2.15□□□□□ -2.07
LOC1YFR001W PRE7P23724 241 aaKnown RBP2.15□□□□□ -2.07
LOC1YFR001W IFM1P25038 676 aa2.15□□□□□ -2.07
LOC1YFR001W RPL16BP26785 198 aaKnown RBP2.15□□□□□ -2.07
LOC1YFR001W ALK2P32789 676 aaPredicted RBP2.15□□□□□ -2.07
LOC1YFR001W CDC13P32797 924 aaKnown RBP2.15□□□□□ -2.07
LOC1YFR001W IMP3P32899 183 aaPredicted RBP2.15□□□□□ -2.07
LOC1YFR001W MRPL6P32904 214 aa2.15□□□□□ -2.07
LOC1YFR001W TPO5P36029 618 aa2.15□□□□□ -2.07
LOC1YFR001W PES4P39684 611 aa2.15□□□□□ -2.07
LOC1YFR001W OSW5P40219 148 aa2.15□□□□□ -2.07
LOC1YFR001W CDC40P40968 455 aaPredicted RBP2.15□□□□□ -2.07
LOC1YFR001W ECO1P43605 281 aa2.15□□□□□ -2.07
LOC1YFR001W BUD13P46947 266 aaPredicted RBP2.15□□□□□ -2.07
LOC1YFR001W HSH155P49955 971 aaKnown RBP2.15□□□□□ -2.07
LOC1YFR001W SWC4P53201 476 aa2.15□□□□□ -2.07
LOC1YFR001W BIO4P53630 237 aa2.15□□□□□ -2.07
LOC1YFR001W ARC18Q05933 178 aaKnown RBP2.15□□□□□ -2.07
LOC1YFR001W CUR1Q06469 252 aa2.15□□□□□ -2.07
LOC1YFR001W IZH4Q99393 312 aa2.15□□□□□ -2.07
LOC1YFR001W GCD2P12754 651 aaPredicted RBP2.14□□□□□ -2.07
LOC1YFR001W YCR025CP25352 136 aa2.14□□□□□ -2.07
LOC1YFR001W GCG1P32656 232 aaKnown RBP2.14□□□□□ -2.07
LOC1YFR001W YHL044WP38727 235 aa2.14□□□□□ -2.07
LOC1YFR001W POP2P39008 433 aa2.14□□□□□ -2.07
LOC1YFR001W VAB2P40003 282 aa2.14□□□□□ -2.07
LOC1YFR001W LOH1P47055 219 aa2.14□□□□□ -2.07
LOC1YFR001W COX16P47081 118 aa2.14□□□□□ -2.07
LOC1YFR001W LIF1P53150 421 aa2.14□□□□□ -2.07
LOC1YFR001W YGL088WP53151 121 aa2.14□□□□□ -2.07
LOC1YFR001W YPL113CQ02961 396 aa2.14□□□□□ -2.07
LOC1YFR001W APC9Q12107 265 aa2.14□□□□□ -2.07
LOC1YFR001W STF1P01098 86 aa2.13□□□□□ -2.07
LOC1YFR001W MET2P08465 486 aa2.13□□□□□ -2.07
LOC1YFR001W SAR1P20606 190 aaKnown RBP2.13□□□□□ -2.07
LOC1YFR001W RPL5P26321 297 aaKnown RBP2.13□□□□□ -2.07
LOC1YFR001W MIG1P27705 504 aa2.13□□□□□ -2.07
LOC1YFR001W PPQ1P32945 549 aa2.13□□□□□ -2.07
LOC1YFR001W SWD2P36104 329 aaPredicted RBP2.13□□□□□ -2.07
LOC1YFR001W MNN9P39107 395 aaKnown RBP2.13□□□□□ -2.07
LOC1YFR001W GDS1P41913 522 aa2.13□□□□□ -2.07
LOC1YFR001W VOA1P53262 265 aa2.13□□□□□ -2.07
LOC1YFR001W SIA1Q12212 622 aa2.13□□□□□ -2.07
LOC1YFR001W TDH2P00358 332 aaKnown RBP2.12□□□□□ -2.07
LOC1YFR001W YAK1P14680 807 aa2.12□□□□□ -2.07
LOC1YFR001W MRPL3P36516 390 aa2.12□□□□□ -2.07
LOC1YFR001W YIL012WP40551 113 aa2.12□□□□□ -2.07
LOC1YFR001W SYS1P41544 203 aa2.12□□□□□ -2.07
LOC1YFR001W MPP10P47083 593 aaKnown RBP2.12□□□□□ -2.07
LOC1YFR001W PRP24P49960 444 aaKnown RBP2.12□□□□□ -2.07
LOC1YFR001W OSH6Q02201 448 aa2.12□□□□□ -2.07
LOC1YFR001W YDR114CQ04597 100 aa2.12□□□□□ -2.07
LOC1YFR001W RRG8Q06109 277 aa2.12□□□□□ -2.07
LOC1YFR001W PEX30Q06169 523 aa2.12□□□□□ -2.07
LOC1YFR001W TAZ1Q06510 381 aa2.12□□□□□ -2.07
LOC1YFR001W VAC14Q06708 880 aa2.12□□□□□ -2.07
LOC1YFR001W RLP24Q07915 199 aaKnown RBP2.12□□□□□ -2.07
LOC1YFR001W MRX4Q12467 430 aa2.12□□□□□ -2.07
LOC1YFR001W RAD7P06779 565 aa2.11□□□□□ -2.07
LOC1YFR001W YOL163WP0CF20 169 aa2.11□□□□□ -2.07
LOC1YFR001W IMP1P28627 190 aa2.11□□□□□ -2.07
LOC1YFR001W UTR5P32630 166 aa2.11□□□□□ -2.07
LOC1YFR001W MBA1P38300 278 aa2.11□□□□□ -2.07
LOC1YFR001W LOC1P43586 204 aaPredicted RBP2.11□□□□□ -2.07
LOC1YFR001W RRP42Q12277 265 aaPredicted RBP2.11□□□□□ -2.07
LOC1YFR001W YPR064WQ12492 139 aa2.11□□□□□ -2.07
LOC1YFR001W KRE1P17260 313 aa2.1□□□□□ -2.07
LOC1YFR001W PHO80P20052 293 aa2.1□□□□□ -2.07
LOC1YFR001W YKL063CP35725 167 aa2.1□□□□□ -2.07
LOC1YFR001W KRE29P40026 464 aa2.1□□□□□ -2.07
LOC1YFR001W MDY2Q12285 212 aa2.1□□□□□ -2.07
LOC1YFR001W VPS1P21576 704 aaKnown RBP2.09□□□□□ -2.07
LOC1YFR001W AEP1P32493 518 aa2.09□□□□□ -2.07
LOC1YFR001W RPC25P35718 212 aa2.09□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 41.2 ms