RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W YIL002W-AQ3E7Z5 69 aa0.93□□□□□ -2.26
SMC1YFL008W YKL068W-AQ3E826 78 aa0.93□□□□□ -2.26
SMC1YFL008W IPP1P00817 287 aaKnown RBP0.92□□□□□ -2.26
SMC1YFL008W ATP6P00854 259 aa0.92□□□□□ -2.26
SMC1YFL008W CKI1P20485 582 aa0.92□□□□□ -2.26
SMC1YFL008W UTR1P21373 530 aa0.92□□□□□ -2.26
SMC1YFL008W OSM1P21375 501 aaKnown RBP0.92□□□□□ -2.26
SMC1YFL008W SKT5P34226 696 aa0.92□□□□□ -2.26
SMC1YFL008W PTK1P36002 662 aaPredicted RBP0.92□□□□□ -2.26
SMC1YFL008W ECM4P36156 370 aa0.92□□□□□ -2.26
SMC1YFL008W HEK2P38199 381 aaKnown RBP RIP-Chip data0.92□□□□□ -2.26not detected
SMC1YFL008W RRF1P38771 230 aa0.92□□□□□ -2.26
SMC1YFL008W FMP32P43557 207 aa0.92□□□□□ -2.26
SMC1YFL008W TMA22P47089 198 aaPredicted RBP0.92□□□□□ -2.26
SMC1YFL008W HAM1P47119 197 aaKnown RBP0.92□□□□□ -2.26
SMC1YFL008W PAC10P48363 199 aa0.92□□□□□ -2.26
SMC1YFL008W PRM1P53835 661 aa0.92□□□□□ -2.26
SMC1YFL008W RPL22BP56628 122 aaKnown RBP0.92□□□□□ -2.26
SMC1YFL008W PLP1Q04004 230 aa0.92□□□□□ -2.26
SMC1YFL008W SPC2Q04969 178 aa0.92□□□□□ -2.26
SMC1YFL008W NKP2Q06162 153 aa0.92□□□□□ -2.26
SMC1YFL008W YPR172WQ06608 200 aa0.92□□□□□ -2.26
SMC1YFL008W IPK1Q06667 281 aa0.92□□□□□ -2.26
SMC1YFL008W LOT6Q07923 191 aa0.92□□□□□ -2.26
SMC1YFL008W UIP4Q08926 304 aa0.92□□□□□ -2.26
SMC1YFL008W FEX2Q08991 375 aa0.92□□□□□ -2.26
SMC1YFL008W GET4Q12125 312 aa0.92□□□□□ -2.26
SMC1YFL008W FRE8Q12209 686 aa0.92□□□□□ -2.26
SMC1YFL008W OCA6Q12454 224 aa0.92□□□□□ -2.26
SMC1YFL008W RRP36Q12481 300 aaPredicted RBP0.92□□□□□ -2.26
SMC1YFL008W ADF1Q2V2Q1 113 aa0.92□□□□□ -2.26
SMC1YFL008W CMC2Q3E7A4 109 aa0.92□□□□□ -2.26
SMC1YFL008W DDP1Q99321 188 aaKnown RBP0.92□□□□□ -2.26
SMC1YFL008W BI3Q9ZZW7 517 aa0.92□□□□□ -2.26
SMC1YFL008W CDC7P06243 507 aa0.92□□□□□ -2.26
SMC1YFL008W MAS2P11914 482 aa0.92□□□□□ -2.26
SMC1YFL008W POL30P15873 258 aaKnown RBP0.92□□□□□ -2.26
SMC1YFL008W VMA2P16140 517 aaKnown RBP0.92□□□□□ -2.26
SMC1YFL008W MER1P16523 270 aa0.92□□□□□ -2.26
SMC1YFL008W COX10P21592 462 aa0.92□□□□□ -2.26
SMC1YFL008W OPI1P21957 404 aa0.92□□□□□ -2.26
SMC1YFL008W BMH1P29311 267 aaKnown RBP0.92□□□□□ -2.26
SMC1YFL008W CSE1P33307 960 aa0.92□□□□□ -2.26
SMC1YFL008W TIR2P33890 251 aa0.92□□□□□ -2.26
SMC1YFL008W MYO3P36006 1272 aa0.92□□□□□ -2.26
SMC1YFL008W JEM1P40358 645 aa0.92□□□□□ -2.26
SMC1YFL008W COX16P47081 118 aa0.92□□□□□ -2.26
SMC1YFL008W LSM8P47093 109 aaKnown RBP0.92□□□□□ -2.26
SMC1YFL008W YPT32P51996 222 aaKnown RBP0.92□□□□□ -2.26
SMC1YFL008W RMR1P53060 241 aa0.92□□□□□ -2.26
SMC1YFL008W YLR283WQ05867 314 aa0.92□□□□□ -2.26
SMC1YFL008W SNU23Q12368 194 aaPredicted RBP0.92□□□□□ -2.26
SMC1YFL008W RTR2Q12378 196 aa0.92□□□□□ -2.26
SMC1YFL008W RPS19AP07280 144 aaKnown RBP0.92□□□□□ -2.26
SMC1YFL008W RPS19BP07281 144 aaPredicted RBP0.92□□□□□ -2.26
SMC1YFL008W MDH1P17505 334 aaKnown RBP RIP-Chip data0.92□□□□□ -2.26not detected
SMC1YFL008W BUD23P25627 275 aaPredicted RBP0.92□□□□□ -2.26
SMC1YFL008W ATP7P30902 174 aa0.92□□□□□ -2.26
SMC1YFL008W RNP1P32385 249 aa0.92□□□□□ -2.26
SMC1YFL008W TIP20P33891 701 aa0.92□□□□□ -2.26
SMC1YFL008W PRX1P34227 261 aaKnown RBP0.92□□□□□ -2.26
SMC1YFL008W SDH4P37298 181 aa0.92□□□□□ -2.26
SMC1YFL008W FMP23P38231 175 aa0.92□□□□□ -2.26
SMC1YFL008W COS8P38723 381 aa0.92□□□□□ -2.26
SMC1YFL008W VPS45P38932 577 aa0.92□□□□□ -2.26
SMC1YFL008W AIM2P39721 246 aa0.92□□□□□ -2.26
SMC1YFL008W FRT2P39734 528 aa0.92□□□□□ -2.26
SMC1YFL008W OXA1P39952 402 aa0.92□□□□□ -2.26
SMC1YFL008W SHQ1P40486 507 aaPredicted RBP0.92□□□□□ -2.26
SMC1YFL008W SNZ3P43545 298 aa0.92□□□□□ -2.26
SMC1YFL008W FAR7P43592 221 aa0.92□□□□□ -2.26
SMC1YFL008W YJL055WP47044 245 aa0.92□□□□□ -2.26
SMC1YFL008W RPC17P47076 161 aa0.92□□□□□ -2.26
SMC1YFL008W AIM24P47127 394 aa0.92□□□□□ -2.26
SMC1YFL008W YGR015CP53208 328 aa0.92□□□□□ -2.26
SMC1YFL008W SNZ2P53824 298 aa0.92□□□□□ -2.26
SMC1YFL008W CWC27Q02770 301 aa0.92□□□□□ -2.26
SMC1YFL008W AIM32Q04689 311 aa0.92□□□□□ -2.26
SMC1YFL008W RNH1Q04740 348 aa0.92□□□□□ -2.26
SMC1YFL008W BCP1Q06338 283 aa0.92□□□□□ -2.26
SMC1YFL008W BRX1Q08235 291 aaKnown RBP0.92□□□□□ -2.26
SMC1YFL008W YOR214CQ12282 236 aa0.92□□□□□ -2.26
SMC1YFL008W LDB17Q12342 491 aa0.92□□□□□ -2.26
SMC1YFL008W YOP1Q12402 180 aa0.92□□□□□ -2.26
SMC1YFL008W ERP4Q12450 207 aa0.92□□□□□ -2.26
SMC1YFL008W TDH2P00358 332 aaKnown RBP0.91□□□□□ -2.26
SMC1YFL008W TDH3P00359 332 aaKnown RBP RIP-Chip data0.91□□□□□ -2.26not detected
SMC1YFL008W RPL24AP04449 155 aaKnown RBP0.91□□□□□ -2.26
SMC1YFL008W RSR1P13856 272 aa0.91□□□□□ -2.26
SMC1YFL008W DBF2P22204 572 aa0.91□□□□□ -2.26
SMC1YFL008W DPB2P24482 689 aaPredicted RBP0.91□□□□□ -2.26
SMC1YFL008W YBL010CP32788 280 aa0.91□□□□□ -2.26
SMC1YFL008W RIB7P33312 244 aa0.91□□□□□ -2.26
SMC1YFL008W ETR1P38071 380 aa0.91□□□□□ -2.26
SMC1YFL008W RFT1P38206 574 aaPredicted RBP0.91□□□□□ -2.26
SMC1YFL008W KAP104P38217 918 aaKnown RBP0.91□□□□□ -2.26
SMC1YFL008W RCK1P38622 512 aa0.91□□□□□ -2.26
SMC1YFL008W RTC3P38804 111 aaPredicted RBP0.91□□□□□ -2.26
SMC1YFL008W THO1P40040 218 aaKnown RBP0.91□□□□□ -2.26
SMC1YFL008W FMC1P40491 155 aa0.91□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 79.2 ms