RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W SFC1P33303 322 aa2.48□□□□□ -2.01
PRE1YER012W LTV1P34078 463 aa2.48□□□□□ -2.01
PRE1YER012W YHR127WP38833 243 aaKnown RBP2.48□□□□□ -2.01
PRE1YER012W YDR089WP38966 869 aa2.48□□□□□ -2.01
PRE1YER012W TOM22P49334 152 aa2.48□□□□□ -2.01
PRE1YER012W TRM9P49957 279 aa2.48□□□□□ -2.01
PRE1YER012W ZRG17P53735 605 aa2.48□□□□□ -2.01
PRE1YER012W RHO5P53879 331 aaKnown RBP2.48□□□□□ -2.01
PRE1YER012W MRS2Q01926 470 aa2.48□□□□□ -2.01
PRE1YER012W UTP6Q02354 440 aaKnown RBP2.48□□□□□ -2.01
PRE1YER012W NUP116Q02630 1113 aa2.48□□□□□ -2.01
PRE1YER012W CDC123Q05791 360 aa2.48□□□□□ -2.01
PRE1YER012W LIP2Q06005 328 aa2.48□□□□□ -2.01
PRE1YER012W YLR030WQ07967 263 aa2.48□□□□□ -2.01
PRE1YER012W MMT2Q08970 484 aa2.48□□□□□ -2.01
PRE1YER012W AEP3Q12089 606 aa2.48□□□□□ -2.01
PRE1YER012W APC9Q12107 265 aa2.48□□□□□ -2.01
PRE1YER012W HSP42Q12329 375 aa2.48□□□□□ -2.01
PRE1YER012W MTR10Q99189 972 aa2.48□□□□□ -2.01
PRE1YER012W RPS27AP35997 82 aaKnown RBP2.47□□□□□ -2.01
PRE1YER012W ASC1P38011 319 aaKnown RBP2.47□□□□□ -2.01
PRE1YER012W RRN10P38204 145 aa2.47□□□□□ -2.01
PRE1YER012W TRM7P38238 310 aaKnown RBP2.47□□□□□ -2.01
PRE1YER012W POP4P38336 279 aa2.47□□□□□ -2.01
PRE1YER012W INM1P38710 295 aa2.47□□□□□ -2.01
PRE1YER012W RPS27BP38711 82 aa2.47□□□□□ -2.01
PRE1YER012W EFM1P38732 585 aa2.47□□□□□ -2.01
PRE1YER012W MNL1P38888 796 aa2.47□□□□□ -2.01
PRE1YER012W GIM4P40005 111 aaKnown RBP2.47□□□□□ -2.01
PRE1YER012W YGR015CP53208 328 aa2.47□□□□□ -2.01
PRE1YER012W SPP2Q02521 185 aa2.47□□□□□ -2.01
PRE1YER012W GIP3Q03016 1276 aa2.47□□□□□ -2.01
PRE1YER012W BET5Q03630 159 aa2.47□□□□□ -2.01
PRE1YER012W YMR209CQ03648 457 aa2.47□□□□□ -2.01
PRE1YER012W CSN9Q03981 162 aa2.47□□□□□ -2.01
PRE1YER012W SNT309Q06091 175 aaPredicted RBP2.47□□□□□ -2.01
PRE1YER012W RIF2Q06208 395 aa2.47□□□□□ -2.01
PRE1YER012W YET3Q07451 203 aa2.47□□□□□ -2.01
PRE1YER012W YOR114WQ12219 294 aa2.47□□□□□ -2.01
PRE1YER012W IPP1P00817 287 aaKnown RBP2.46□□□□□ -2.02
PRE1YER012W CTR86P25355 563 aa2.46□□□□□ -2.02
PRE1YER012W TRX3P25372 127 aa2.46□□□□□ -2.02
PRE1YER012W FAA1P30624 700 aaKnown RBP2.46□□□□□ -2.02
PRE1YER012W ZIP1P31111 875 aa2.46□□□□□ -2.02
PRE1YER012W RIM1P32445 135 aaKnown RBP2.46□□□□□ -2.02
PRE1YER012W SRB4P32569 687 aa2.46□□□□□ -2.02
PRE1YER012W TAF14P35189 244 aa2.46□□□□□ -2.02
PRE1YER012W ETR1P38071 380 aa2.46□□□□□ -2.02
PRE1YER012W RTC2P38279 296 aa2.46□□□□□ -2.02
PRE1YER012W YSW1P38280 609 aa2.46□□□□□ -2.02
PRE1YER012W STN1P38960 494 aa2.46□□□□□ -2.02
PRE1YER012W GGC1P38988 300 aa2.46□□□□□ -2.02
PRE1YER012W NPT1P39683 429 aaKnown RBP2.46□□□□□ -2.02
PRE1YER012W JLP2P40206 208 aa2.46□□□□□ -2.02
PRE1YER012W UTP25P40498 721 aaKnown RBP2.46□□□□□ -2.02
PRE1YER012W RPC17P47076 161 aa2.46□□□□□ -2.02
PRE1YER012W MDE1P47095 244 aa2.46□□□□□ -2.02
PRE1YER012W IBA57P47158 497 aa2.46□□□□□ -2.02
PRE1YER012W BIO3P50277 480 aa2.46□□□□□ -2.02
PRE1YER012W BOL2P53082 120 aa2.46□□□□□ -2.02
PRE1YER012W MPS2P53159 387 aa2.46□□□□□ -2.02
PRE1YER012W SED5Q01590 340 aa2.46□□□□□ -2.02
PRE1YER012W VTI1Q04338 217 aa2.46□□□□□ -2.02
PRE1YER012W RAX1Q08760 435 aa2.46□□□□□ -2.02
PRE1YER012W YPL245WQ12179 454 aaKnown RBP2.46□□□□□ -2.02
PRE1YER012W FRE6Q12473 712 aa2.46□□□□□ -2.02
PRE1YER012W MHT1Q12525 324 aa2.46□□□□□ -2.02
PRE1YER012W IES6P32617 166 aa2.45□□□□□ -2.02
PRE1YER012W SPT10P35208 640 aa2.45□□□□□ -2.02
PRE1YER012W STP2P38704 541 aa2.45□□□□□ -2.02
PRE1YER012W GPI16P38875 610 aa2.45□□□□□ -2.02
PRE1YER012W PTI1P39927 425 aaPredicted RBP2.45□□□□□ -2.02
PRE1YER012W DFG10P40526 253 aa2.45□□□□□ -2.02
PRE1YER012W YFR018CP43599 363 aa2.45□□□□□ -2.02
PRE1YER012W YJR030CP47101 745 aa2.45□□□□□ -2.02
PRE1YER012W AIF1P52923 378 aa2.45□□□□□ -2.02
PRE1YER012W ROG1P53118 685 aa2.45□□□□□ -2.02
PRE1YER012W BIO4P53630 237 aa2.45□□□□□ -2.02
PRE1YER012W SUR7P54003 302 aa2.45□□□□□ -2.02
PRE1YER012W MEH1Q02205 184 aa2.45□□□□□ -2.02
PRE1YER012W RSM10Q03201 203 aa2.45□□□□□ -2.02
PRE1YER012W RRB1Q04225 511 aaKnown RBP2.45□□□□□ -2.02
PRE1YER012W MED2Q12124 431 aa2.45□□□□□ -2.02
PRE1YER012W NFI1Q12216 726 aa2.45□□□□□ -2.02
PRE1YER012W YOR012WQ12351 137 aa2.45□□□□□ -2.02
PRE1YER012W GTT2Q12390 233 aa2.45□□□□□ -2.02
PRE1YER012W MDN1Q12019 4910 aaKnown RBP2.44□□□□□ -2.02
PRE1YER012W PDE2P06776 526 aa2.44□□□□□ -2.02
PRE1YER012W STE3P06783 470 aa2.44□□□□□ -2.02
PRE1YER012W SPT3P06844 337 aa2.44□□□□□ -2.02
PRE1YER012W PUP2P32379 260 aa2.44□□□□□ -2.02
PRE1YER012W NIP1P32497 812 aaKnown RBP2.44□□□□□ -2.02
PRE1YER012W LAS1P36146 502 aaPredicted RBP2.44□□□□□ -2.02
PRE1YER012W CAJ1P39101 391 aa2.44□□□□□ -2.02
PRE1YER012W RPL10P41805 221 aaKnown RBP2.44□□□□□ -2.02
PRE1YER012W YJR149WP47177 404 aa2.44□□□□□ -2.02
PRE1YER012W YPT32P51996 222 aaKnown RBP2.44□□□□□ -2.02
PRE1YER012W YGR016WP53209 190 aa2.44□□□□□ -2.02
PRE1YER012W CLD1P53264 445 aa2.44□□□□□ -2.02
PRE1YER012W GPI15P53961 229 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 79.6 ms