RNA–Protein interactions for RNA: YDR495C

VPS3, Transcript of Component of CORVET membrane tethering complex, yeastyeast

Gene VPS3, Length 3,036 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS3YDR495C HMT1P38074 348 aa2.72□□□□□ -1.97
VPS3YDR495C VPS52P39904 641 aa2.72□□□□□ -1.97
VPS3YDR495C GIM4P40005 111 aaKnown RBP2.72□□□□□ -1.97
VPS3YDR495C YNL234WP53857 426 aa2.72□□□□□ -1.97
VPS3YDR495C YNL140CP53910 189 aa2.72□□□□□ -1.97
VPS3YDR495C ESA1Q08649 445 aa2.72□□□□□ -1.97
VPS3YDR495C RIO1Q12196 484 aaKnown RBP2.72□□□□□ -1.97
VPS3YDR495C YDL009CQ12210 107 aa2.72□□□□□ -1.97
VPS3YDR495C RRP42Q12277 265 aaPredicted RBP2.72□□□□□ -1.97
VPS3YDR495C PAB1P04147 577 aaKnown RBP RIP-Chip data2.71□□□□□ -1.97not detected
VPS3YDR495C TFS1P14306 219 aa2.71□□□□□ -1.97
VPS3YDR495C KAR9P32526 644 aa2.71□□□□□ -1.97
VPS3YDR495C MUD1P32605 298 aaKnown RBP2.71□□□□□ -1.97
VPS3YDR495C SRP102P36057 244 aaPredicted RBP2.71□□□□□ -1.97
VPS3YDR495C ATG12P38316 186 aa2.71□□□□□ -1.97
VPS3YDR495C JLP2P40206 208 aa2.71□□□□□ -1.97
VPS3YDR495C QRI1P43123 477 aaKnown RBP2.71□□□□□ -1.97
VPS3YDR495C GAT1P43574 510 aa2.71□□□□□ -1.97
VPS3YDR495C IRC7P43623 340 aa2.71□□□□□ -1.97
VPS3YDR495C CIN2P46670 268 aa2.71□□□□□ -1.97
VPS3YDR495C SWC4P53201 476 aa2.71□□□□□ -1.97
VPS3YDR495C YNL040WP53960 456 aaPredicted RBP2.71□□□□□ -1.97
VPS3YDR495C YMR114CQ04471 368 aaKnown RBP2.71□□□□□ -1.97
VPS3YDR495C HEM25Q07534 307 aa2.71□□□□□ -1.97
VPS3YDR495C DDC1Q08949 612 aa2.71□□□□□ -1.97
VPS3YDR495C YCT1Q12235 531 aa2.71□□□□□ -1.97
VPS3YDR495C RDL1Q12305 139 aaKnown RBP2.71□□□□□ -1.97
VPS3YDR495C DCN1Q12395 269 aa2.71□□□□□ -1.97
VPS3YDR495C PET20Q99373 253 aa2.71□□□□□ -1.97
VPS3YDR495C ERD1P16151 362 aa2.71□□□□□ -1.98
VPS3YDR495C TIP1P27654 210 aaPredicted RBP2.71□□□□□ -1.98
VPS3YDR495C COQ3P27680 312 aa2.71□□□□□ -1.98
VPS3YDR495C PUB1P32588 453 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
VPS3YDR495C JEN1P36035 616 aa2.71□□□□□ -1.98
VPS3YDR495C TES1P41903 349 aaKnown RBP2.71□□□□□ -1.98
VPS3YDR495C PRM10P42946 383 aa2.71□□□□□ -1.98
VPS3YDR495C CTK3P46963 296 aaPredicted RBP2.71□□□□□ -1.98
VPS3YDR495C SBH2P52871 88 aa2.71□□□□□ -1.98
VPS3YDR495C MRPL51Q06090 140 aaPredicted RBP2.71□□□□□ -1.98
VPS3YDR495C RRS1Q08746 203 aaKnown RBP2.71□□□□□ -1.98
VPS3YDR495C TIM18Q08749 192 aa2.71□□□□□ -1.98
VPS3YDR495C YLR112WQ12130 139 aa2.71□□□□□ -1.98
VPS3YDR495C CPT1P17898 393 aa2.71□□□□□ -1.98
VPS3YDR495C EXO70P19658 623 aa2.71□□□□□ -1.98
VPS3YDR495C HOM6P31116 359 aaKnown RBP2.71□□□□□ -1.98
VPS3YDR495C DEP1P31385 405 aa2.71□□□□□ -1.98
VPS3YDR495C SPS18P32572 300 aa2.71□□□□□ -1.98
VPS3YDR495C MIC26P50087 233 aa2.71□□□□□ -1.98
VPS3YDR495C YLR460CP54007 376 aa2.71□□□□□ -1.98
VPS3YDR495C IRC15Q02733 499 aa2.71□□□□□ -1.98
VPS3YDR495C YDC1Q02896 317 aa2.71□□□□□ -1.98
VPS3YDR495C YPR147CQ06522 304 aaKnown RBP2.71□□□□□ -1.98
VPS3YDR495C MHR1Q06630 226 aa2.71□□□□□ -1.98
VPS3YDR495C YOR114WQ12219 294 aa2.71□□□□□ -1.98
VPS3YDR495C YPR064WQ12492 139 aa2.71□□□□□ -1.98
VPS3YDR495C PET494P07390 489 aaPredicted RBP2.7□□□□□ -1.98
VPS3YDR495C SAM2P19358 384 aaKnown RBP2.7□□□□□ -1.98
VPS3YDR495C SLY1P22213 666 aa2.7□□□□□ -1.98
VPS3YDR495C PPH21P23594 369 aa2.7□□□□□ -1.98
VPS3YDR495C NTF2P33331 125 aaKnown RBP2.7□□□□□ -1.98
VPS3YDR495C RIB5P38145 238 aa2.7□□□□□ -1.98
VPS3YDR495C ECM8P38246 354 aa2.7□□□□□ -1.98
VPS3YDR495C GRE3P38715 327 aaKnown RBP RIP-Chip data2.7□□□□□ -1.98not detected
VPS3YDR495C PRE6P40303 254 aaKnown RBP2.7□□□□□ -1.98
VPS3YDR495C YNL320WP42840 284 aa2.7□□□□□ -1.98
VPS3YDR495C NUP57P48837 541 aa2.7□□□□□ -1.98
VPS3YDR495C CTL1Q03220 320 aaKnown RBP2.7□□□□□ -1.98
VPS3YDR495C ECI1Q05871 280 aa2.7□□□□□ -1.98
VPS3YDR495C BSC1Q12140 328 aa2.7□□□□□ -1.98
VPS3YDR495C RPN6Q12377 434 aa2.7□□□□□ -1.98
VPS3YDR495C RPS28BP0C0X0 67 aaKnown RBP2.7□□□□□ -1.98
VPS3YDR495C GCY1P14065 312 aaKnown RBP RIP-Chip data2.7□□□□□ -1.98not detected
VPS3YDR495C ELM1P32801 640 aa2.7□□□□□ -1.98
VPS3YDR495C YBR096WP38256 230 aa2.7□□□□□ -1.98
VPS3YDR495C DER1P38307 211 aa2.7□□□□□ -1.98
VPS3YDR495C NDT80P38830 627 aa2.7□□□□□ -1.98
VPS3YDR495C CSM2P40465 213 aa2.7□□□□□ -1.98
VPS3YDR495C SFH5P47008 294 aa2.7□□□□□ -1.98
VPS3YDR495C TRM9P49957 279 aa2.7□□□□□ -1.98
VPS3YDR495C PRP24P49960 444 aaKnown RBP2.7□□□□□ -1.98
VPS3YDR495C YPS5P53057 165 aa2.7□□□□□ -1.98
VPS3YDR495C COS1P53822 381 aa2.7□□□□□ -1.98
VPS3YDR495C ODC1Q03028 310 aa2.7□□□□□ -1.98
VPS3YDR495C YML096WQ04489 525 aa2.7□□□□□ -1.98
VPS3YDR495C THI20Q08224 551 aa2.7□□□□□ -1.98
VPS3YDR495C MUM3Q08750 479 aa2.7□□□□□ -1.98
VPS3YDR495C SNU23Q12368 194 aaPredicted RBP2.7□□□□□ -1.98
VPS3YDR495C YPL119C-AQ3E751 87 aa2.7□□□□□ -1.98
VPS3YDR495C RPS28AQ3E7X9 67 aaPredicted RBP2.7□□□□□ -1.98
VPS3YDR495C REP1P03871 373 aa2.69□□□□□ -1.98
VPS3YDR495C RPS3P05750 240 aaKnown RBP2.69□□□□□ -1.98
VPS3YDR495C SEN2P16658 377 aa2.69□□□□□ -1.98
VPS3YDR495C GLN3P18494 730 aa2.69□□□□□ -1.98
VPS3YDR495C PMT2P31382 759 aa2.69□□□□□ -1.98
VPS3YDR495C UBC13P52490 153 aa2.69□□□□□ -1.98
VPS3YDR495C MMS2P53152 137 aa2.69□□□□□ -1.98
VPS3YDR495C MSO1P53604 210 aaKnown RBP2.69□□□□□ -1.98
VPS3YDR495C BNA5Q05979 453 aa2.69□□□□□ -1.98
VPS3YDR495C YET3Q07451 203 aa2.69□□□□□ -1.98
VPS3YDR495C YDL114WQ07530 308 aa2.69□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms