RNA–Protein interactions for RNA: YDR460W

TFB3, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB3, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB3	YDR460W	YEL076C-A	P0CX16	216 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	YLR464W	P0CX17	216 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	TFS1	P14306	219 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	EST1	P17214	699 aa	Predicted RBP	4.26	□□□□□ -1.73
TFB3	YDR460W	ANB1	P19211	157 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	CKS1	P20486	150 aa	Known RBP	4.26	□□□□□ -1.73
TFB3	YDR460W	SGF29	P25554	259 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	GID7	P25569	745 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	ATG15	P25641	520 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	SUA7	P29055	345 aa	Predicted RBP	4.26	□□□□□ -1.73
TFB3	YDR460W	PRE4	P30657	266 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	HOM6	P31116	359 aa	Known RBP	4.26	□□□□□ -1.73
TFB3	YDR460W	TIP20	P33891	701 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	THI80	P35202	319 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	YPT53	P36019	220 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	SOL2	P37262	315 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	RIB1	P38066	345 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	FUI1	P38196	639 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	MTC4	P38335	694 aa	Known RBP	4.26	□□□□□ -1.73
TFB3	YDR460W	GPI16	P38875	610 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	FET3	P38993	636 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	YEL076C	P39971	216 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	GAT2	P40209	560 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	PRE6	P40303	254 aa	Known RBP	4.26	□□□□□ -1.73
TFB3	YDR460W	ICE2	P40499	491 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	YJL218W	P40892	196 aa	Known RBP	4.26	□□□□□ -1.73
TFB3	YDR460W	SIP4	P46954	829 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	MCM22	P47167	239 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	YJR149W	P47177	404 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	SOL1	P50278	321 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	PHO23	P50947	330 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	LCL3	P53153	274 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	YPR003C	P53394	754 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	PRP38	Q00723	242 aa	Predicted RBP	4.26	□□□□□ -1.73
TFB3	YDR460W	YPL014W	Q02606	381 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	SND1	Q04007	877 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	FIT1	Q04433	528 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	YDR124W	Q04608	324 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	PEX30	Q06169	523 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	ECM7	Q06200	448 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	YLR446W	Q06204	433 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	RIF2	Q06208	395 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	PIN3	Q06449	215 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	ATG33	Q06485	197 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	MRI1	Q06489	411 aa	Known RBP	4.26	□□□□□ -1.73
TFB3	YDR460W	HFI1	Q12060	488 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	TPO4	Q12256	659 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	NPC2	Q12408	173 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	PET20	Q99373	253 aa		4.26	□□□□□ -1.73
TFB3	YDR460W	YOR304C-A	O14468	76 aa		4.25	□□□□□ -1.73
TFB3	YDR460W	YPK1	P12688	680 aa	Known RBP	4.25	□□□□□ -1.73
TFB3	YDR460W	UNG1	P12887	359 aa		4.25	□□□□□ -1.73
TFB3	YDR460W	STE4	P18851	423 aa		4.25	□□□□□ -1.73
TFB3	YDR460W	AAT2	P23542	418 aa	Known RBP	4.25	□□□□□ -1.73
TFB3	YDR460W	MIH1	P23748	554 aa		4.25	□□□□□ -1.73
TFB3	YDR460W	EXG1	P23776	448 aa	Known RBP	4.25	□□□□□ -1.73
TFB3	YDR460W	PEX4	P29340	183 aa		4.25	□□□□□ -1.73
TFB3	YDR460W	ARP2	P32381	391 aa	Known RBP	4.25	□□□□□ -1.73
TFB3	YDR460W	ATG12	P38316	186 aa		4.25	□□□□□ -1.73
TFB3	YDR460W	MDM31	P38880	579 aa		4.25	□□□□□ -1.73
TFB3	YDR460W	FAD1	P38913	306 aa		4.25	□□□□□ -1.73
TFB3	YDR460W	ASP1	P38986	381 aa	Predicted RBP	4.25	□□□□□ -1.73
TFB3	YDR460W	COG3	P40094	801 aa		4.25	□□□□□ -1.73
TFB3	YDR460W	PAU15	P40585	124 aa		4.25	□□□□□ -1.73
TFB3	YDR460W	YAR1	P46683	200 aa		4.25	□□□□□ -1.73
TFB3	YDR460W	AIM25	P47140	327 aa		4.25	□□□□□ -1.73
TFB3	YDR460W	PMT3	P47190	753 aa		4.25	□□□□□ -1.73
TFB3	YDR460W	AVT4	P50944	713 aa		4.25	□□□□□ -1.73
TFB3	YDR460W	AIF1	P52923	378 aa		4.25	□□□□□ -1.73
TFB3	YDR460W	COG7	P53195	279 aa		4.25	□□□□□ -1.73
TFB3	YDR460W	BUD17	P53727	317 aa		4.25	□□□□□ -1.73
TFB3	YDR460W	GPI15	P53961	229 aa		4.25	□□□□□ -1.73
TFB3	YDR460W	ASI3	P53983	676 aa		4.25	□□□□□ -1.73
TFB3	YDR460W	SPR6	Q01684	191 aa		4.25	□□□□□ -1.73
TFB3	YDR460W	CTF19	Q02732	369 aa		4.25	□□□□□ -1.73
TFB3	YDR460W	EKI1	Q03764	534 aa		4.25	□□□□□ -1.73
TFB3	YDR460W	CTK1	Q03957	528 aa	Known RBP	4.25	□□□□□ -1.73
TFB3	YDR460W	ARG7	Q04728	441 aa		4.25	□□□□□ -1.73
TFB3	YDR460W	YDR286C	Q05530	114 aa		4.25	□□□□□ -1.73
TFB3	YDR460W	CNL1	Q06333	122 aa		4.25	□□□□□ -1.73
TFB3	YDR460W	ATG10	Q07879	167 aa		4.25	□□□□□ -1.73
TFB3	YDR460W	LDB18	Q07887	179 aa		4.25	□□□□□ -1.73
TFB3	YDR460W	THP1	Q08231	455 aa		4.25	□□□□□ -1.73
TFB3	YDR460W	RRG7	Q08774	242 aa	Predicted RBP	4.25	□□□□□ -1.73
TFB3	YDR460W	YLL056C	Q12177	298 aa		4.25	□□□□□ -1.73
TFB3	YDR460W	YPL245W	Q12179	454 aa	Known RBP	4.25	□□□□□ -1.73
TFB3	YDR460W	MHT1	Q12525	324 aa		4.25	□□□□□ -1.73
TFB3	YDR460W	YPR014C	Q6B0W2	109 aa		4.25	□□□□□ -1.73
TFB3	YDR460W	FSH3	Q99369	266 aa		4.25	□□□□□ -1.73
TFB3	YDR460W	YLR358C	O13565	187 aa		4.24	□□□□□ -1.73
TFB3	YDR460W	CUP1-1	P0CX80	61 aa		4.24	□□□□□ -1.73
TFB3	YDR460W	CUP1-2	P0CX81	61 aa		4.24	□□□□□ -1.73
TFB3	YDR460W	SAM1	P10659	382 aa	Known RBP	4.24	□□□□□ -1.73
TFB3	YDR460W	MET8	P15807	274 aa		4.24	□□□□□ -1.73
TFB3	YDR460W	RPB3	P16370	318 aa	Known RBP	4.24	□□□□□ -1.73
TFB3	YDR460W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
TFB3	YDR460W	STE50	P25344	346 aa		4.24	□□□□□ -1.73
TFB3	YDR460W	PET18	P25362	215 aa		4.24	□□□□□ -1.73
TFB3	YDR460W	RRP7	P25368	297 aa	Predicted RBP	4.24	□□□□□ -1.73
TFB3	YDR460W	URK1	P27515	501 aa		4.24	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 32.4 ms