RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W FRE2P36033 711 aa2.24□□□□□ -2.05
SNX41YDR425W SIF2P38262 535 aa2.24□□□□□ -2.05
SNX41YDR425W FET3P38993 636 aa2.24□□□□□ -2.05
SNX41YDR425W PTI1P39927 425 aaPredicted RBP2.24□□□□□ -2.05
SNX41YDR425W DOT5P40553 215 aa2.24□□□□□ -2.05
SNX41YDR425W GTT1P40582 234 aa2.24□□□□□ -2.05
SNX41YDR425W YJL016WP47072 561 aa2.24□□□□□ -2.05
SNX41YDR425W ECM27P47144 725 aa2.24□□□□□ -2.05
SNX41YDR425W POP6P53218 158 aa2.24□□□□□ -2.05
SNX41YDR425W YNR068CP53754 272 aa2.24□□□□□ -2.05
SNX41YDR425W GOR1P53839 350 aa2.24□□□□□ -2.05
SNX41YDR425W ALG11P53954 548 aaKnown RBP2.24□□□□□ -2.05
SNX41YDR425W ARL3Q02804 198 aa2.24□□□□□ -2.05
SNX41YDR425W VHS1Q03785 461 aa2.24□□□□□ -2.05
SNX41YDR425W HPT1Q04178 221 aaKnown RBP2.24□□□□□ -2.05
SNX41YDR425W RPC11Q04307 110 aaPredicted RBP2.24□□□□□ -2.05
SNX41YDR425W RBS1Q05672 457 aaKnown RBP2.24□□□□□ -2.05
SNX41YDR425W PHO92Q06390 306 aa2.24□□□□□ -2.05
SNX41YDR425W ARV1Q06541 321 aa2.24□□□□□ -2.05
SNX41YDR425W THP1Q08231 455 aa2.24□□□□□ -2.05
SNX41YDR425W YPL199CQ08954 240 aa2.24□□□□□ -2.05
SNX41YDR425W YKL018C-AQ3E7A7 99 aa2.24□□□□□ -2.05
SNX41YDR425W MHF2Q3E829 80 aa2.24□□□□□ -2.05
SNX41YDR425W SAS5Q99314 248 aa2.24□□□□□ -2.05
SNX41YDR425W IZH4Q99393 312 aa2.24□□□□□ -2.05
SNX41YDR425W CBP6P07253 162 aaPredicted RBP2.24□□□□□ -2.05
SNX41YDR425W MAS1P10507 462 aa2.24□□□□□ -2.05
SNX41YDR425W GRR1P24814 1151 aa2.24□□□□□ -2.05
SNX41YDR425W YCR090CP25654 182 aaKnown RBP2.24□□□□□ -2.05
SNX41YDR425W PTM1P32857 523 aa2.24□□□□□ -2.05
SNX41YDR425W SRY1P36007 326 aa2.24□□□□□ -2.05
SNX41YDR425W TCD2P36101 447 aaKnown RBP2.24□□□□□ -2.05
SNX41YDR425W BNA4P38169 460 aa2.24□□□□□ -2.05
SNX41YDR425W COA1P40452 197 aa2.24□□□□□ -2.05
SNX41YDR425W RRT5P43607 289 aa2.24□□□□□ -2.05
SNX41YDR425W OKP1P53298 406 aa2.24□□□□□ -2.05
SNX41YDR425W ERV25P54837 211 aaKnown RBP2.24□□□□□ -2.05
SNX41YDR425W MRPS16Q02608 121 aa2.24□□□□□ -2.05
SNX41YDR425W RMI1Q02685 241 aa2.24□□□□□ -2.05
SNX41YDR425W AIM36Q03798 255 aa2.24□□□□□ -2.05
SNX41YDR425W YDR131CQ03899 556 aa2.24□□□□□ -2.05
SNX41YDR425W YLR283WQ05867 314 aa2.24□□□□□ -2.05
SNX41YDR425W YHC1Q05900 231 aaKnown RBP2.24□□□□□ -2.05
SNX41YDR425W BUR2Q05949 395 aa2.24□□□□□ -2.05
SNX41YDR425W RRG7Q08774 242 aaPredicted RBP2.24□□□□□ -2.05
SNX41YDR425W YRM1Q12340 786 aa2.24□□□□□ -2.05
SNX41YDR425W WTM1Q12363 437 aaKnown RBP2.24□□□□□ -2.05
SNX41YDR425W GIS3Q12418 502 aa2.24□□□□□ -2.05
SNX41YDR425W RRP12Q12754 1228 aaKnown RBP2.24□□□□□ -2.05
SNX41YDR425W SPS2P08459 502 aa2.23□□□□□ -2.05
SNX41YDR425W FUS3P16892 353 aaKnown RBP2.23□□□□□ -2.05
SNX41YDR425W AAC3P18238 307 aa2.23□□□□□ -2.05
SNX41YDR425W OLE1P21147 510 aaKnown RBP2.23□□□□□ -2.05
SNX41YDR425W APA2P22108 325 aa2.23□□□□□ -2.05
SNX41YDR425W PXA2P34230 853 aa2.23□□□□□ -2.05
SNX41YDR425W MBA1P38300 278 aa2.23□□□□□ -2.05
SNX41YDR425W PRS2P38620 318 aaKnown RBP2.23□□□□□ -2.05
SNX41YDR425W GEP4P38812 185 aa2.23□□□□□ -2.05
SNX41YDR425W AIM2P39721 246 aa2.23□□□□□ -2.05
SNX41YDR425W AFG3P39925 761 aa2.23□□□□□ -2.05
SNX41YDR425W RGI1P40043 161 aaPredicted RBP2.23□□□□□ -2.05
SNX41YDR425W RFC2P40348 353 aa2.23□□□□□ -2.05
SNX41YDR425W YJL218WP40892 196 aaKnown RBP2.23□□□□□ -2.05
SNX41YDR425W BNA6P43619 295 aa2.23□□□□□ -2.05
SNX41YDR425W GWT1P47026 490 aa2.23□□□□□ -2.05
SNX41YDR425W RAD17P48581 401 aa2.23□□□□□ -2.05
SNX41YDR425W PRM8P53174 237 aa2.23□□□□□ -2.05
SNX41YDR425W NQM1P53228 333 aaPredicted RBP2.23□□□□□ -2.05
SNX41YDR425W YGR066CP53242 292 aa2.23□□□□□ -2.05
SNX41YDR425W GTR2P53290 341 aa2.23□□□□□ -2.05
SNX41YDR425W RTT102P53330 157 aa2.23□□□□□ -2.05
SNX41YDR425W LSM7P53905 115 aaKnown RBP2.23□□□□□ -2.05
SNX41YDR425W SLG1P54867 378 aa2.23□□□□□ -2.05
SNX41YDR425W SNZ1Q03148 297 aa2.23□□□□□ -2.05
SNX41YDR425W PRM15Q03262 622 aa2.23□□□□□ -2.05
SNX41YDR425W YMD8Q03697 442 aa2.23□□□□□ -2.05
SNX41YDR425W MHR1Q06630 226 aa2.23□□□□□ -2.05
SNX41YDR425W YLR413WQ06689 675 aa2.23□□□□□ -2.05
SNX41YDR425W DIB1Q06819 143 aaPredicted RBP2.23□□□□□ -2.05
SNX41YDR425W BRX1Q08235 291 aaKnown RBP2.23□□□□□ -2.05
SNX41YDR425W YDR056CQ12025 205 aa2.23□□□□□ -2.05
SNX41YDR425W YOR283WQ12040 230 aaKnown RBP2.23□□□□□ -2.05
SNX41YDR425W AEP3Q12089 606 aa2.23□□□□□ -2.05
SNX41YDR425W MDY2Q12285 212 aa2.23□□□□□ -2.05
SNX41YDR425W RTN2Q12443 393 aa2.23□□□□□ -2.05
SNX41YDR425W YER078W-AQ3E7A2 54 aa2.23□□□□□ -2.05
SNX41YDR425W SUS1Q6WNK7 96 aa2.23□□□□□ -2.05
SNX41YDR425W MTR10Q99189 972 aa2.23□□□□□ -2.05
SNX41YDR425W YOS9Q99220 542 aa2.23□□□□□ -2.05
SNX41YDR425W ISN1Q99312 450 aa2.23□□□□□ -2.05
SNX41YDR425W FAS2P19097 1887 aaKnown RBP2.23□□□□□ -2.05
SNX41YDR425W REP2P03872 296 aa2.22□□□□□ -2.05
SNX41YDR425W CHS1P08004 1131 aa2.22□□□□□ -2.05
SNX41YDR425W MET2P08465 486 aa2.22□□□□□ -2.05
SNX41YDR425W YFR010W-AP0C5N0 62 aa2.22□□□□□ -2.05
SNX41YDR425W PET54P10834 293 aa2.22□□□□□ -2.05
SNX41YDR425W HPR1P17629 752 aaKnown RBP2.22□□□□□ -2.05
SNX41YDR425W GLK1P17709 500 aaKnown RBP2.22□□□□□ -2.05
SNX41YDR425W PHO80P20052 293 aa2.22□□□□□ -2.05
SNX41YDR425W CKS1P20486 150 aaKnown RBP2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 53.5 ms