RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C VBA1Q04301 562 aa3.24□□□□□ -1.89
SHU2YDR078C GMC1Q04399 608 aa3.24□□□□□ -1.89
SHU2YDR078C TFC7Q12415 435 aa3.24□□□□□ -1.89
SHU2YDR078C FOL3Q12676 427 aaPredicted RBP3.24□□□□□ -1.89
SHU2YDR078C LAG2Q92325 660 aa3.24□□□□□ -1.89
SHU2YDR078C MSF1P08425 469 aa3.23□□□□□ -1.89
SHU2YDR078C ASP3-2P0CX77 362 aa3.23□□□□□ -1.89
SHU2YDR078C ASP3-3P0CX78 362 aa3.23□□□□□ -1.89
SHU2YDR078C ASP3-4P0CX79 362 aa3.23□□□□□ -1.89
SHU2YDR078C ASP3-1P0CZ17 362 aa3.23□□□□□ -1.89
SHU2YDR078C REV1P12689 985 aa3.23□□□□□ -1.89
SHU2YDR078C MET16P18408 261 aaPredicted RBP3.23□□□□□ -1.89
SHU2YDR078C CYM1P32898 989 aa3.23□□□□□ -1.89
SHU2YDR078C TIP20P33891 701 aa3.23□□□□□ -1.89
SHU2YDR078C TAE1P38340 232 aa3.23□□□□□ -1.89
SHU2YDR078C COA1P40452 197 aa3.23□□□□□ -1.89
SHU2YDR078C AGX1P43567 385 aa3.23□□□□□ -1.89
SHU2YDR078C CPD1P53314 239 aa3.23□□□□□ -1.89
SHU2YDR078C TIM11P81449 96 aaPredicted RBP3.23□□□□□ -1.89
SHU2YDR078C MRPS16Q02608 121 aa3.23□□□□□ -1.89
SHU2YDR078C RPL21AQ02753 160 aaKnown RBP3.23□□□□□ -1.89
SHU2YDR078C YMR209CQ03648 457 aa3.23□□□□□ -1.89
SHU2YDR078C INP2Q03824 705 aa3.23□□□□□ -1.89
SHU2YDR078C API2Q04413 109 aa3.23□□□□□ -1.89
SHU2YDR078C CTS2Q06350 511 aa3.23□□□□□ -1.89
SHU2YDR078C YDR018CQ12185 396 aa3.23□□□□□ -1.89
SHU2YDR078C HSP26P15992 214 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
SHU2YDR078C PCL1P24867 279 aa3.22□□□□□ -1.89
SHU2YDR078C LDB16P25587 256 aa3.22□□□□□ -1.89
SHU2YDR078C SPS19P32573 292 aaKnown RBP3.22□□□□□ -1.89
SHU2YDR078C SPT4P32914 102 aaPredicted RBP3.22□□□□□ -1.89
SHU2YDR078C YOX1P34161 385 aa3.22□□□□□ -1.89
SHU2YDR078C VAB2P40003 282 aa3.22□□□□□ -1.89
SHU2YDR078C HIT1P46973 164 aa3.22□□□□□ -1.89
SHU2YDR078C YNL134CP53912 376 aaKnown RBP3.22□□□□□ -1.89
SHU2YDR078C KTR6P54070 446 aa3.22□□□□□ -1.89
SHU2YDR078C TSA2Q04120 196 aa3.22□□□□□ -1.89
SHU2YDR078C PEX30Q06169 523 aa3.22□□□□□ -1.89
SHU2YDR078C MED4Q12343 284 aa3.22□□□□□ -1.89
SHU2YDR078C EPT1P22140 391 aa3.21□□□□□ -1.9
SHU2YDR078C RRT12P25381 491 aa3.21□□□□□ -1.9
SHU2YDR078C IME2P32581 645 aa3.21□□□□□ -1.9
SHU2YDR078C MRPL6P32904 214 aa3.21□□□□□ -1.9
SHU2YDR078C GPX1P36014 167 aa3.21□□□□□ -1.9
SHU2YDR078C SMP1P38128 452 aa3.21□□□□□ -1.9
SHU2YDR078C RFT1P38206 574 aaPredicted RBP3.21□□□□□ -1.9
SHU2YDR078C YBR062CP38239 180 aa3.21□□□□□ -1.9
SHU2YDR078C NPT1P39683 429 aaKnown RBP3.21□□□□□ -1.9
SHU2YDR078C LIA1P47120 325 aaKnown RBP3.21□□□□□ -1.9
SHU2YDR078C YNL040WP53960 456 aaPredicted RBP3.21□□□□□ -1.9
SHU2YDR078C HAL1Q01766 294 aa3.21□□□□□ -1.9
SHU2YDR078C VHS1Q03785 461 aa3.21□□□□□ -1.9
SHU2YDR078C SEC13Q04491 297 aaKnown RBP3.21□□□□□ -1.9
SHU2YDR078C DPP1Q05521 289 aa3.21□□□□□ -1.9
SHU2YDR078C YOR292CQ08743 309 aa3.21□□□□□ -1.9
SHU2YDR078C VIK1Q12045 647 aa3.21□□□□□ -1.9
SHU2YDR078C BTS1Q12051 335 aa3.21□□□□□ -1.9
SHU2YDR078C TY3A-GQ12173 290 aa3.21□□□□□ -1.9
SHU2YDR078C TY3A-IQ99219 290 aa3.21□□□□□ -1.9
SHU2YDR078C VPS1P21576 704 aaKnown RBP3.2□□□□□ -1.9
SHU2YDR078C AEP1P32493 518 aa3.2□□□□□ -1.9
SHU2YDR078C SUA5P32579 426 aa3.2□□□□□ -1.9
SHU2YDR078C CSE1P33307 960 aa3.2□□□□□ -1.9
SHU2YDR078C SDS24P38314 527 aa3.2□□□□□ -1.9
SHU2YDR078C BNA6P43619 295 aa3.2□□□□□ -1.9
SHU2YDR078C YGL262WP53054 175 aa3.2□□□□□ -1.9
SHU2YDR078C VEL1P53058 206 aa3.2□□□□□ -1.9
SHU2YDR078C TPN1P53099 579 aa3.2□□□□□ -1.9
SHU2YDR078C CDC14Q00684 551 aa3.2□□□□□ -1.9
SHU2YDR078C SRL4Q03085 281 aa3.2□□□□□ -1.9
SHU2YDR078C RNH1Q04740 348 aa3.2□□□□□ -1.9
SHU2YDR078C YOR114WQ12219 294 aa3.2□□□□□ -1.9
SHU2YDR078C YBL111CQ3E7Y5 667 aa3.2□□□□□ -1.9
SHU2YDR078C CBP6P07253 162 aaPredicted RBP3.19□□□□□ -1.9
SHU2YDR078C DAL82P21705 255 aa3.19□□□□□ -1.9
SHU2YDR078C CWP1P28319 239 aa3.19□□□□□ -1.9
SHU2YDR078C CDC13P32797 924 aaKnown RBP3.19□□□□□ -1.9
SHU2YDR078C UTH1P36135 365 aa3.19□□□□□ -1.9
SHU2YDR078C HSM3P38348 480 aa3.19□□□□□ -1.9
SHU2YDR078C YHR045WP38775 560 aa3.19□□□□□ -1.9
SHU2YDR078C RRT13P40042 185 aa3.19□□□□□ -1.9
SHU2YDR078C DDI1P40087 428 aa3.19□□□□□ -1.9
SHU2YDR078C RRG9P40156 214 aa3.19□□□□□ -1.9
SHU2YDR078C TAD2P47058 250 aa3.19□□□□□ -1.9
SHU2YDR078C IBA57P47158 497 aa3.19□□□□□ -1.9
SHU2YDR078C FMP48P53233 369 aa3.19□□□□□ -1.9
SHU2YDR078C ALG11P53954 548 aaKnown RBP3.19□□□□□ -1.9
SHU2YDR078C TRM44Q02648 567 aaKnown RBP3.19□□□□□ -1.9
SHU2YDR078C OST6Q03723 332 aa3.19□□□□□ -1.9
SHU2YDR078C ADH6Q04894 360 aaKnown RBP3.19□□□□□ -1.9
SHU2YDR078C TAF9Q05027 157 aa3.19□□□□□ -1.9
SHU2YDR078C BOP2Q06150 570 aa3.19□□□□□ -1.9
SHU2YDR078C ARV1Q06541 321 aa3.19□□□□□ -1.9
SHU2YDR078C YOL029CQ08187 201 aa3.19□□□□□ -1.9
SHU2YDR078C PSK1P31374 1356 aa3.19□□□□□ -1.9
SHU2YDR078C RAD3P06839 778 aa3.18□□□□□ -1.9
SHU2YDR078C PET494P07390 489 aaPredicted RBP3.18□□□□□ -1.9
SHU2YDR078C POF1P25576 258 aa3.18□□□□□ -1.9
SHU2YDR078C ECM34P38728 170 aa3.18□□□□□ -1.9
SHU2YDR078C PEX31P53203 462 aa3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 34.6 ms