RNA–Protein interactions for RNA: YDR061W

YDR061W, Transcript of Protein with similarity to ABC transporter family members, yeast

Gene YDR061W, Length 1,620 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR061W	YDR061W	FHL1	P39521	936 aa		2.6	□□□□□ -1.99
YDR061W	YDR061W	HEM14	P40012	539 aa		2.6	□□□□□ -1.99
YDR061W	YDR061W	MOB1	P40484	314 aa		2.6	□□□□□ -1.99
YDR061W	YDR061W	HSH155	P49955	971 aa	Known RBP	2.6	□□□□□ -1.99
YDR061W	YDR061W	NBP1	P52919	319 aa	Predicted RBP	2.6	□□□□□ -1.99
YDR061W	YDR061W	MST27	P53176	234 aa		2.6	□□□□□ -1.99
YDR061W	YDR061W	OKP1	P53298	406 aa		2.6	□□□□□ -1.99
YDR061W	YDR061W	YPL080C	Q02826	108 aa		2.6	□□□□□ -1.99
YDR061W	YDR061W	ELP3	Q02908	557 aa	Known RBP	2.6	□□□□□ -1.99
YDR061W	YDR061W	YHC1	Q05900	231 aa	Known RBP	2.6	□□□□□ -1.99
YDR061W	YDR061W	RIF2	Q06208	395 aa		2.6	□□□□□ -1.99
YDR061W	YDR061W	BCP1	Q06338	283 aa		2.6	□□□□□ -1.99
YDR061W	YDR061W	PBP4	Q07362	185 aa	Known RBP	2.6	□□□□□ -1.99
YDR061W	YDR061W	YPQ1	Q12010	308 aa		2.6	□□□□□ -1.99
YDR061W	YDR061W	PLP2	Q12017	286 aa		2.6	□□□□□ -1.99
YDR061W	YDR061W	YDL109C	Q12103	647 aa		2.6	□□□□□ -1.99
YDR061W	YDR061W	RPN6	Q12377	434 aa		2.6	□□□□□ -1.99
YDR061W	YDR061W	PRP46	Q12417	451 aa	Predicted RBP	2.6	□□□□□ -1.99
YDR061W	YDR061W	TDH1	P00360	332 aa	Known RBP	2.6	□□□□□ -1.99
YDR061W	YDR061W	RPS14A	P06367	137 aa	Known RBP	2.6	□□□□□ -1.99
YDR061W	YDR061W	RPL23A	P0CX41	137 aa	Known RBP	2.6	□□□□□ -1.99
YDR061W	YDR061W	RPL23B	P0CX42	137 aa	Known RBP	2.6	□□□□□ -1.99
YDR061W	YDR061W	ASP3-2	P0CX77	362 aa		2.6	□□□□□ -1.99
YDR061W	YDR061W	ASP3-3	P0CX78	362 aa		2.6	□□□□□ -1.99
YDR061W	YDR061W	ASP3-4	P0CX79	362 aa		2.6	□□□□□ -1.99
YDR061W	YDR061W	ASP3-1	P0CZ17	362 aa		2.6	□□□□□ -1.99
YDR061W	YDR061W	VPS3	P23643	1011 aa		2.6	□□□□□ -1.99
YDR061W	YDR061W	YBL059W	P34224	193 aa		2.6	□□□□□ -1.99
YDR061W	YDR061W	COY1	P34237	679 aa		2.6	□□□□□ -1.99
YDR061W	YDR061W	HMT1	P38074	348 aa		2.6	□□□□□ -1.99
YDR061W	YDR061W	RPS14B	P39516	138 aa	Known RBP	2.6	□□□□□ -1.99
YDR061W	YDR061W	RCY1	P39531	840 aa		2.6	□□□□□ -1.99
YDR061W	YDR061W	YAT2	P40017	923 aa		2.6	□□□□□ -1.99
YDR061W	YDR061W	SLM1	P40485	686 aa		2.6	□□□□□ -1.99
YDR061W	YDR061W	EGT2	P42835	1041 aa		2.6	□□□□□ -1.99
YDR061W	YDR061W	FMP33	P46998	180 aa		2.6	□□□□□ -1.99
YDR061W	YDR061W	YGL260W	P53056	76 aa		2.6	□□□□□ -1.99
YDR061W	YDR061W	TRM82	Q03774	444 aa		2.6	□□□□□ -1.99
YDR061W	YDR061W	DDC1	Q08949	612 aa		2.6	□□□□□ -1.99
YDR061W	YDR061W	FRE8	Q12209	686 aa		2.6	□□□□□ -1.99
YDR061W	YDR061W	SIA1	Q12212	622 aa		2.6	□□□□□ -1.99
YDR061W	YDR061W	HHF1	P02309	103 aa	Known RBP	2.59	□□□□□ -1.99
YDR061W	YDR061W	HEM4	P06174	275 aa		2.59	□□□□□ -1.99
YDR061W	YDR061W	RPS18A	P0CX55	146 aa	Known RBP	2.59	□□□□□ -1.99
YDR061W	YDR061W	RPS18B	P0CX56	146 aa	Predicted RBP	2.59	□□□□□ -1.99
YDR061W	YDR061W	NAM9	P27929	486 aa		2.59	□□□□□ -1.99
YDR061W	YDR061W	ITR2	P30606	609 aa		2.59	□□□□□ -1.99
YDR061W	YDR061W	YKT6	P36015	200 aa	Known RBP	2.59	□□□□□ -1.99
YDR061W	YDR061W	RFT1	P38206	574 aa	Predicted RBP	2.59	□□□□□ -1.99
YDR061W	YDR061W	RCK2	P38623	610 aa		2.59	□□□□□ -1.99
YDR061W	YDR061W	PTI1	P39927	425 aa	Predicted RBP	2.59	□□□□□ -1.99
YDR061W	YDR061W	DFG10	P40526	253 aa		2.59	□□□□□ -1.99
YDR061W	YDR061W	AGX1	P43567	385 aa		2.59	□□□□□ -1.99
YDR061W	YDR061W	COX16	P47081	118 aa		2.59	□□□□□ -1.99
YDR061W	YDR061W	BNS1	P50084	137 aa		2.59	□□□□□ -1.99
YDR061W	YDR061W	SHY1	P53266	389 aa		2.59	□□□□□ -1.99
YDR061W	YDR061W	TIM8	P57744	87 aa		2.59	□□□□□ -1.99
YDR061W	YDR061W	YMR010W	Q03687	405 aa		2.59	□□□□□ -1.99
YDR061W	YDR061W	ATC1	Q04005	294 aa		2.59	□□□□□ -1.99
YDR061W	YDR061W	HRI1	Q05905	244 aa	Known RBP	2.59	□□□□□ -1.99
YDR061W	YDR061W	CDD1	Q06549	142 aa		2.59	□□□□□ -1.99
YDR061W	YDR061W	LAA1	P39526	2014 aa		2.59	□□□□□ -2
YDR061W	YDR061W	DAL2	P25335	343 aa		2.58	□□□□□ -2
YDR061W	YDR061W	PEX34	P25584	144 aa		2.58	□□□□□ -2
YDR061W	YDR061W	ZRT1	P32804	376 aa		2.58	□□□□□ -2
YDR061W	YDR061W	PAN6	P40459	309 aa		2.58	□□□□□ -2
YDR061W	YDR061W	REE1	P40893	198 aa		2.58	□□□□□ -2
YDR061W	YDR061W	YNL320W	P42840	284 aa		2.58	□□□□□ -2
YDR061W	YDR061W	NUP84	P52891	726 aa		2.58	□□□□□ -2
YDR061W	YDR061W	SEH1	P53011	349 aa	Known RBP	2.58	□□□□□ -2
YDR061W	YDR061W	CRH1	P53301	507 aa		2.58	□□□□□ -2
YDR061W	YDR061W	HCH1	P53834	153 aa		2.58	□□□□□ -2
YDR061W	YDR061W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	2.58	□□□□□ -2	not detected
YDR061W	YDR061W	RNH1	Q04740	348 aa		2.58	□□□□□ -2
YDR061W	YDR061W	TAF10	Q12030	206 aa		2.58	□□□□□ -2
YDR061W	YDR061W	APC9	Q12107	265 aa		2.58	□□□□□ -2
YDR061W	YDR061W	SGT2	Q12118	346 aa	Known RBP	2.58	□□□□□ -2
YDR061W	YDR061W	YOL107W	Q12239	342 aa		2.58	□□□□□ -2
YDR061W	YDR061W	MCT1	Q12283	360 aa		2.58	□□□□□ -2
YDR061W	YDR061W	HRT3	Q12347	344 aa		2.58	□□□□□ -2
YDR061W	YDR061W	IZH2	Q12442	317 aa		2.58	□□□□□ -2
YDR061W	YDR061W	SPS100	P13130	326 aa		2.57	□□□□□ -2
YDR061W	YDR061W	SPT15	P13393	240 aa	Known RBP	2.57	□□□□□ -2
YDR061W	YDR061W	RPB5	P20434	215 aa		2.57	□□□□□ -2
YDR061W	YDR061W	RRT12	P25381	491 aa		2.57	□□□□□ -2
YDR061W	YDR061W	PMT2	P31382	759 aa		2.57	□□□□□ -2
YDR061W	YDR061W	MEI5	P32489	222 aa		2.57	□□□□□ -2
YDR061W	YDR061W	ANR2	P36090	516 aa	Predicted RBP	2.57	□□□□□ -2
YDR061W	YDR061W	SWD2	P36104	329 aa	Predicted RBP	2.57	□□□□□ -2
YDR061W	YDR061W	SHE3	P38272	425 aa	Known RBP	2.57	□□□□□ -2
YDR061W	YDR061W	HIS2	P38635	335 aa		2.57	□□□□□ -2
YDR061W	YDR061W	CTM1	P38818	585 aa		2.57	□□□□□ -2
YDR061W	YDR061W	YNL208W	P40159	199 aa	Known RBP	2.57	□□□□□ -2
YDR061W	YDR061W	YFR057W	P43625	151 aa		2.57	□□□□□ -2
YDR061W	YDR061W	BIR1	P47134	954 aa		2.57	□□□□□ -2
YDR061W	YDR061W	CLD1	P53264	445 aa		2.57	□□□□□ -2
YDR061W	YDR061W	SPP2	Q02521	185 aa		2.57	□□□□□ -2
YDR061W	YDR061W	GRX3	Q03835	250 aa		2.57	□□□□□ -2
YDR061W	YDR061W	YMR027W	Q04371	470 aa		2.57	□□□□□ -2
YDR061W	YDR061W	RLP24	Q07915	199 aa	Known RBP	2.57	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 104.5 ms