RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W UNG1P12887 359 aa1.48□□□□□ -2.17
TRM3YDL112W RPS1BP23248 255 aaKnown RBP1.48□□□□□ -2.17
TRM3YDL112W PTC6P25646 442 aa1.48□□□□□ -2.17
TRM3YDL112W HIR2P32480 875 aa1.48□□□□□ -2.17
TRM3YDL112W RPT5P33297 434 aaKnown RBP1.48□□□□□ -2.17
TRM3YDL112W LIN1P38852 340 aaPredicted RBP1.48□□□□□ -2.17
TRM3YDL112W TDA11P38854 504 aa1.48□□□□□ -2.17
TRM3YDL112W MLH1P38920 769 aa1.48□□□□□ -2.17
TRM3YDL112W RCY1P39531 840 aa1.48□□□□□ -2.17
TRM3YDL112W MEP2P41948 499 aa1.48□□□□□ -2.17
TRM3YDL112W MRK1P50873 501 aa1.48□□□□□ -2.17
TRM3YDL112W MPP6P53725 186 aaPredicted RBP1.48□□□□□ -2.17
TRM3YDL112W YNL010WP53981 241 aaKnown RBP1.48□□□□□ -2.17
TRM3YDL112W RSM28Q03430 361 aa1.48□□□□□ -2.17
TRM3YDL112W YDR391CQ04170 232 aa1.48□□□□□ -2.17
TRM3YDL112W TRI1Q05024 226 aa1.48□□□□□ -2.17
TRM3YDL112W YLR352WQ06479 807 aa1.48□□□□□ -2.17
TRM3YDL112W AIM6Q07716 390 aa1.48□□□□□ -2.17
TRM3YDL112W COQ10Q08058 207 aa1.48□□□□□ -2.17
TRM3YDL112W YRA1Q12159 226 aaKnown RBP1.48□□□□□ -2.17
TRM3YDL112W RRI1Q12468 440 aa1.48□□□□□ -2.17
TRM3YDL112W CAR1P00812 333 aaKnown RBP1.47□□□□□ -2.17
TRM3YDL112W ATP6P00854 259 aa1.47□□□□□ -2.17
TRM3YDL112W PEP4P07267 405 aaKnown RBP1.47□□□□□ -2.17
TRM3YDL112W PDA1P16387 420 aaKnown RBP1.47□□□□□ -2.17
TRM3YDL112W CNA1P23287 553 aa1.47□□□□□ -2.17
TRM3YDL112W ICS2P38284 255 aa1.47□□□□□ -2.17
TRM3YDL112W ECM10P39987 644 aa1.47□□□□□ -2.17
TRM3YDL112W HXT9P40885 567 aa1.47□□□□□ -2.17
TRM3YDL112W GPI8P49018 411 aa1.47□□□□□ -2.17
TRM3YDL112W HXT11P54862 567 aa1.47□□□□□ -2.17
TRM3YDL112W RVB1Q03940 463 aaKnown RBP1.47□□□□□ -2.17
TRM3YDL112W RAF1Q06891 181 aa1.47□□□□□ -2.17
TRM3YDL112W MFG1Q07684 458 aa1.47□□□□□ -2.17
TRM3YDL112W RPN5Q12250 445 aaKnown RBP1.47□□□□□ -2.17
TRM3YDL112W YDL180WQ12301 547 aa1.47□□□□□ -2.17
TRM3YDL112W RPS5P26783 225 aaKnown RBP1.47□□□□□ -2.17
TRM3YDL112W SRO77P38163 1010 aa1.47□□□□□ -2.17
TRM3YDL112W VBA2P38358 474 aaKnown RBP1.47□□□□□ -2.17
TRM3YDL112W YHL044WP38727 235 aa1.47□□□□□ -2.17
TRM3YDL112W MSY1P48527 492 aa1.47□□□□□ -2.17
TRM3YDL112W CDH1P53197 566 aa1.47□□□□□ -2.17
TRM3YDL112W CUS2P53830 285 aaPredicted RBP1.47□□□□□ -2.17
TRM3YDL112W YNL046WP53956 172 aa1.47□□□□□ -2.17
TRM3YDL112W NUP116Q02630 1113 aa1.47□□□□□ -2.17
TRM3YDL112W MIX14Q04341 121 aa1.47□□□□□ -2.17
TRM3YDL112W YKU80Q04437 629 aa1.47□□□□□ -2.17
TRM3YDL112W YEH2Q07950 538 aa1.47□□□□□ -2.17
TRM3YDL112W NSL1Q12143 216 aa1.47□□□□□ -2.17
TRM3YDL112W RLM1Q12224 676 aa1.47□□□□□ -2.17
TRM3YDL112W UTP20P35194 2493 aaKnown RBP1.47□□□□□ -2.17
TRM3YDL112W EXO70P19658 623 aa1.47□□□□□ -2.17
TRM3YDL112W NUP2P32499 720 aa1.47□□□□□ -2.17
TRM3YDL112W SEC17P32602 292 aa1.47□□□□□ -2.17
TRM3YDL112W GPX1P36014 167 aa1.47□□□□□ -2.17
TRM3YDL112W YFL051CP43552 160 aa1.47□□□□□ -2.17
TRM3YDL112W MKC7P53379 596 aa1.47□□□□□ -2.17
TRM3YDL112W INN1P53901 409 aa1.47□□□□□ -2.17
TRM3YDL112W MET31Q03081 177 aa1.47□□□□□ -2.17
TRM3YDL112W FMN1Q03778 218 aa1.47□□□□□ -2.17
TRM3YDL112W SPC19Q03954 165 aa1.47□□□□□ -2.17
TRM3YDL112W FAR8Q05040 523 aa1.47□□□□□ -2.17
TRM3YDL112W YPR127WQ06494 345 aa1.47□□□□□ -2.17
TRM3YDL112W SYO1Q07395 620 aa1.47□□□□□ -2.17
TRM3YDL112W GRC3Q07845 632 aa1.47□□□□□ -2.17
TRM3YDL112W YOL131WQ08270 108 aa1.47□□□□□ -2.17
TRM3YDL112W TAF3Q12297 353 aa1.47□□□□□ -2.17
TRM3YDL112W ARG3P05150 338 aa1.47□□□□□ -2.17
TRM3YDL112W MRP2P10663 115 aaPredicted RBP1.47□□□□□ -2.17
TRM3YDL112W RAD51P25454 400 aa1.47□□□□□ -2.17
TRM3YDL112W RCK1P38622 512 aa1.47□□□□□ -2.17
TRM3YDL112W GAT2P40209 560 aa1.47□□□□□ -2.17
TRM3YDL112W YIL024CP40543 189 aa1.47□□□□□ -2.17
TRM3YDL112W RNY1Q02933 434 aaKnown RBP1.47□□□□□ -2.17
TRM3YDL112W MSC1Q03104 513 aa1.47□□□□□ -2.17
TRM3YDL112W YDR239CQ03780 787 aa1.47□□□□□ -2.17
TRM3YDL112W IRC19Q07843 230 aa1.47□□□□□ -2.17
TRM3YDL112W RDL2Q08742 149 aaKnown RBP1.47□□□□□ -2.17
TRM3YDL112W APC9Q12107 265 aa1.47□□□□□ -2.17
TRM3YDL112W DST1P07273 309 aa1.46□□□□□ -2.18
TRM3YDL112W YOL163WP0CF20 169 aa1.46□□□□□ -2.18
TRM3YDL112W ZWF1P11412 505 aaKnown RBP1.46□□□□□ -2.18
TRM3YDL112W SPS100P13130 326 aa1.46□□□□□ -2.18
TRM3YDL112W ITR1P30605 584 aa1.46□□□□□ -2.18
TRM3YDL112W YLF2P38746 405 aa1.46□□□□□ -2.18
TRM3YDL112W AIM2P39721 246 aa1.46□□□□□ -2.18
TRM3YDL112W RFC4P40339 323 aaKnown RBP1.46□□□□□ -2.18
TRM3YDL112W YIL012WP40551 113 aa1.46□□□□□ -2.18
TRM3YDL112W IDP2P41939 412 aa1.46□□□□□ -2.18
TRM3YDL112W RPS0BP46654 252 aaKnown RBP1.46□□□□□ -2.18
TRM3YDL112W MDE1P47095 244 aa1.46□□□□□ -2.18
TRM3YDL112W DUO1P53168 247 aaKnown RBP1.46□□□□□ -2.18
TRM3YDL112W TIM10P87108 93 aa1.46□□□□□ -2.18
TRM3YDL112W YMR102CQ03177 834 aa1.46□□□□□ -2.18
TRM3YDL112W IPK1Q06667 281 aa1.46□□□□□ -2.18
TRM3YDL112W DBP3P20447 523 aaKnown RBP1.46□□□□□ -2.18
TRM3YDL112W YKL102CP34249 101 aa1.46□□□□□ -2.18
TRM3YDL112W YPT10P38146 199 aa1.46□□□□□ -2.18
TRM3YDL112W AST2P39945 430 aaKnown RBP1.46□□□□□ -2.18
TRM3YDL112W GDI1P39958 451 aaKnown RBP1.46□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms