RNA–Protein interactions for RNA: ENST00000620828.4

FMR1-217, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best)

Gene FMR1, Length 4,830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-217ENST00000620828 PTGESO14684 152 aa6.31□□□□□ -1.4
FMR1-217ENST00000620828 FGFR1P11362 822 aa6.31□□□□□ -1.4
FMR1-217ENST00000620828 PKP1Q13835 747 aa6.31□□□□□ -1.4
FMR1-217ENST00000620828 ZBTB6Q15916 424 aa6.31□□□□□ -1.4
FMR1-217ENST00000620828 USP49Q70CQ1 688 aa6.31□□□□□ -1.4
FMR1-217ENST00000620828 OTUD6AQ7L8S5 288 aa6.31□□□□□ -1.4
FMR1-217ENST00000620828 LINC00301Q8NCQ3 95 aa6.31□□□□□ -1.4
FMR1-217ENST00000620828 TMEM161BQ8NDZ6 487 aa6.31□□□□□ -1.4
FMR1-217ENST00000620828 PIGOQ8TEQ8 1089 aa6.31□□□□□ -1.4
FMR1-217ENST00000620828 CEP170P1Q96L14 293 aa6.31□□□□□ -1.4
FMR1-217ENST00000620828 IPO9Q96P70 1041 aaKnown RBP6.31□□□□□ -1.4
FMR1-217ENST00000620828 ASB2Q96Q27 587 aa6.31□□□□□ -1.4
FMR1-217ENST00000620828 TMEM175Q9BSA9 504 aa6.31□□□□□ -1.4
FMR1-217ENST00000620828 B4GALT5O43286 388 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 TBC1D4O60343 1298 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 PPP6R2O75170 966 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 DDHD2O94830 711 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 KCNJ6P48051 423 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 RAB27AP51159 221 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 CBX2Q14781 532 aaPredicted RBP6.3□□□□□ -1.4
FMR1-217ENST00000620828 ADGRD2Q7Z7M1 963 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 PPP1R10Q96QC0 940 aaKnown RBP6.3□□□□□ -1.4
FMR1-217ENST00000620828 GCOM2Q9BZD3 368 aaPredicted RBP6.3□□□□□ -1.4
FMR1-217ENST00000620828 TMEM189-UBE2V1I3L0A0 370 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 FOSL2P15408 326 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 HOXD13P35453 343 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 CYP4A11Q02928 519 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 GIT2Q14161 759 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 PADI6Q6TGC4 694 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 EPM2AIP1Q7L775 607 aaPredicted RBP6.3□□□□□ -1.4
FMR1-217ENST00000620828 CSRNP2Q9H175 543 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 POLR3FQ9H1D9 316 aaPredicted RBP6.3□□□□□ -1.4
FMR1-217ENST00000620828 RNF39Q9H2S5 420 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 SLC28A3Q9HAS3 691 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 CHST7Q9NS84 486 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 HPSEQ9Y251 543 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 PHLPP2Q6ZVD8 1323 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 E9PMD0 336 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 DUSP6Q16828 381 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 LIMS2Q7Z4I7 341 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 TPH2Q8IWU9 490 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 ALG13Q9NP73 1137 aaKnown RBP6.3□□□□□ -1.4
FMR1-217ENST00000620828 TYW1Q9NV66 732 aaKnown RBP6.3□□□□□ -1.4
FMR1-217ENST00000620828 IPPQ9Y573 584 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 ACKR2O00590 384 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 SCP2P22307 547 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 TMOD1P28289 359 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 IRS1P35568 1242 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 TRIM29Q14134 588 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 RHPN2Q8IUC4 686 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.3□□□□□ -1.4
FMR1-217ENST00000620828 MCPH1Q8NEM0 835 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 PSPC1Q8WXF1 523 aaKnown RBP6.3□□□□□ -1.4
FMR1-217ENST00000620828 RAD54LQ92698 747 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 PABPC5Q96DU9 382 aaKnown RBP6.3□□□□□ -1.4
FMR1-217ENST00000620828 USP28Q96RU2 1077 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 ACO2Q99798 780 aaKnown RBP6.3□□□□□ -1.4
FMR1-217ENST00000620828 COL25A1Q9BXS0 654 aaPredicted RBP6.3□□□□□ -1.4
FMR1-217ENST00000620828 NRDE2Q9H7Z3 1164 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 RXFP1Q9HBX9 757 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 PCDHB2Q9Y5E7 798 aa6.3□□□□□ -1.4
FMR1-217ENST00000620828 TBX10O75333 385 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 POU2F2P09086 479 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 ERVFC1P60507 584 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 GTF2BQ00403 316 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 SF3A1Q15459 793 aaKnown RBP6.29□□□□□ -1.4
FMR1-217ENST00000620828 DDX53Q86TM3 631 aaKnown RBP6.29□□□□□ -1.4
FMR1-217ENST00000620828 EFHBQ8N7U6 833 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 FBXO22Q8NEZ5 403 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 ZSCAN16Q9H4T2 348 aaPredicted RBP6.29□□□□□ -1.4
FMR1-217ENST00000620828 DDX19AQ9NUU7 478 aaKnown RBP6.29□□□□□ -1.4
FMR1-217ENST00000620828 TBC1D13Q9NVG8 400 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 TNFSF13BQ9Y275 285 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 CSDE1O75534 798 aaKnown RBP6.29□□□□□ -1.4
FMR1-217ENST00000620828 STAG3L1P0CL83 205 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 SFPQP23246 707 aaKnown RBP eCLIP6.29□□□□□ -1.4
FMR1-217ENST00000620828 AARSP49588 968 aaKnown RBP eCLIP6.29□□□□□ -1.4
FMR1-217ENST00000620828 POU5F1Q01860 360 aaKnown RBP6.29□□□□□ -1.4
FMR1-217ENST00000620828 PDE12Q6L8Q7 609 aaKnown RBP6.29□□□□□ -1.4
FMR1-217ENST00000620828 SHC4Q6S5L8 630 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 ZNF280BQ86YH2 543 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 KLHL23Q8NBE8 558 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 HERC2P3Q9BVR0 1158 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 KBTBD4Q9NVX7 518 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 LRWD1Q9UFC0 647 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 A0A087WWV3 80 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 STX6O43752 255 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 PDIA4P13667 645 aaKnown RBP6.29□□□□□ -1.4
FMR1-217ENST00000620828 NPTX2P47972 431 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 POLGP54098 1239 aaPredicted RBP6.29□□□□□ -1.4
FMR1-217ENST00000620828 MCL1Q07820 350 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 SAFBQ15424 915 aaKnown RBP eCLIP6.29□□□□□ -1.4
FMR1-217ENST00000620828 XKR9Q5GH70 373 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 KIAA0319Q5VV43 1072 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 LARP1BQ659C4 914 aaKnown RBP6.29□□□□□ -1.4
FMR1-217ENST00000620828 HAUS3Q68CZ6 603 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 CLEC17AQ6ZS10 378 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 FIBCD1Q8N539 461 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 SPRYD3Q8NCJ5 442 aa6.29□□□□□ -1.4
FMR1-217ENST00000620828 SLC7A3Q8WY07 619 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms