RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 GATA4P43694 442 aa4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 GSK3AP49840 483 aa4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 TUBP50607 506 aa4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 CLCN7P51798 805 aa4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 MAPK10P53779 464 aa4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 ROR1Q01973 937 aa4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 CYP4F3Q08477 520 aa4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 PAK1Q13153 545 aa4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 LAPTM5Q13571 262 aa4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 BLMHQ13867 455 aa4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 PDCD1Q15116 288 aa4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 TMEM177Q53S58 311 aa4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 SPATA1Q5VX52 437 aa4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 IZUMO3Q5VZ72 239 aa4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 RCSD1Q6JBY9 416 aa4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 CYP2R1Q6VVX0 501 aa4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 RNF111Q6ZNA4 994 aa4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 TSPYL5Q86VY4 417 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 CHST14Q8NCH0 376 aa4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 ATRIPQ8WXE1 791 aa4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 GOLGA1Q92805 767 aa4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 MVB12AQ96EY5 273 aa4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 RSRC1Q96IZ7 334 aaKnown RBP4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 TSPAN18Q96SJ8 248 aa4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 DBNDD2Q9BQY9 259 aa4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 CHCHD6Q9BRQ6 235 aa4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 LRFN3Q9BTN0 628 aa4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 NUP62CLQ9H1M0 184 aa4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 UNC45AQ9H3U1 944 aa4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 GRHPRQ9UBQ7 328 aa4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 CCDC39Q9UFE4 941 aa4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 CORO2BQ9UQ03 480 aa4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 NOC2LQ9Y3T9 749 aaKnown RBP4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 GCC2Q8IWJ2 1684 aa4.99□□□□□ -1.61
HMGB1P21-201ENST00000502313 CLSPNQ9HAW4 1339 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 ADGRB3O60242 1522 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 TSPY2A6NKD2 308 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 RHPN2P1A8MT19 583 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 FAM227AF5H4B4 570 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 H3BML4 177 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 CSTBP04080 98 aaKnown RBP4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 ALDH2P05091 517 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 CEACAM5P06731 702 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 TSPY3P0CV98 308 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 TSPY8P0CW00 308 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 VAV1P15498 845 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 YBX3P16989 372 aaKnown RBP eCLIP4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 ATICP31939 592 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 ELF1P32519 619 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 GALNSP34059 522 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 ADMP35318 185 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 UBA7P41226 1012 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 TECP42680 631 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 CTSKP43235 329 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 CLK1P49759 484 aaKnown RBP4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 CASP5P51878 434 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 TSPY1Q01534 308 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 ICA1Q05084 483 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 POSTNQ15063 836 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 CNN3Q15417 329 aaKnown RBP4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 TAF12Q16514 161 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 CPSF6Q16630 551 aaKnown RBP eCLIP4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 TBC1D10BQ4KMP7 808 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 RNF43Q68DV7 783 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 SWSAP1Q6NVH7 229 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 THAP5Q7Z6K1 395 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 HEATR4Q86WZ0 1026 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 CREG2Q8IUH2 290 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 DENND1CQ8IV53 801 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 THEMISQ8N1K5 641 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 KRT78Q8N1N4 520 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 ZNF713Q8N859 430 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 FAM181AQ8N9Y4 354 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 KREMEN2Q8NCW0 462 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 SLC30A5Q8TAD4 765 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 COPS5Q92905 334 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 USP13Q92995 863 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 ARL8AQ96BM9 186 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 C1GALT1C1Q96EU7 318 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 ZNF496Q96IT1 587 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 HEXIM2Q96MH2 286 aaKnown RBP4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 ZMAT2Q96NC0 199 aaKnown RBP4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 FCRL3Q96P31 734 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 NUDT16L1Q9BRJ7 211 aaKnown RBP4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 FOXP3Q9BZS1 431 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 ATP6V0A4Q9HBG4 840 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 NKIRAS2Q9NYR9 191 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 ARHGAP28Q9P2N2 729 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 ACAD8Q9UKU7 415 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 STRCP1A6NGW2 1772 aa4.98□□□□□ -1.61
HMGB1P21-201ENST00000502313 ZNF335Q9H4Z2 1342 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P21-201ENST00000502313 NPHP4O75161 1426 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P21-201ENST00000502313 ADAMTS13Q76LX8 1427 aa4.97□□□□□ -1.61
HMGB1P21-201ENST00000502313 PRAG1Q86YV5 1406 aa4.97□□□□□ -1.61
HMGB1P21-201ENST00000502313 SCAF11Q99590 1463 aaKnown RBP4.97□□□□□ -1.61
HMGB1P21-201ENST00000502313 NUP155O75694 1391 aa4.97□□□□□ -1.61
HMGB1P21-201ENST00000502313 TMEM265A0A087WTH1 108 aa4.97□□□□□ -1.61
HMGB1P21-201ENST00000502313 ANKRD18BA2A2Z9 1011 aa4.97□□□□□ -1.61
HMGB1P21-201ENST00000502313 FAM47E-STBD1D6RA91 191 aa4.97□□□□□ -1.61
HMGB1P21-201ENST00000502313 ARVCFO00192 962 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms