RNA–Protein interactions for RNA: ENST00000478085.5

SGSM3-209, Transcript of small G protein signaling modulator 3, humanhuman

TSL 2

Gene SGSM3, Length 4,218 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-209ENST00000478085 NPTX2P47972 431 aa12.74□□□□□ -0.37
SGSM3-209ENST00000478085 CENPPQ6IPU0 288 aa12.74□□□□□ -0.37
SGSM3-209ENST00000478085 KIAA1841Q6NSI8 718 aa12.74□□□□□ -0.37
SGSM3-209ENST00000478085 GJB7Q6PEY0 223 aa12.74□□□□□ -0.37
SGSM3-209ENST00000478085 CATSPERGQ6ZRH7 1159 aa12.74□□□□□ -0.37
SGSM3-209ENST00000478085 PRPF31Q8WWY3 499 aaKnown RBP12.74□□□□□ -0.37
SGSM3-209ENST00000478085 RABGGTAQ92696 567 aa12.74□□□□□ -0.37
SGSM3-209ENST00000478085 WDR24Q96S15 920 aa12.74□□□□□ -0.37
SGSM3-209ENST00000478085 NCK2O43639 380 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 PEX10O60683 326 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 PNMA6AP0CW24 399 aaPredicted RBP12.73□□□□□ -0.37
SGSM3-209ENST00000478085 RARBP10826 455 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 ZNF18P17022 549 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 RARRES1P49788 294 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 SLC7A5Q01650 507 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 METTL23Q86XA0 190 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 CCDC63Q8NA47 563 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 TMEM35BQ8NCS4 154 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 KIAA0895Q8NCT3 520 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 GTF3C2Q8WUA4 911 aaPredicted RBP12.73□□□□□ -0.37
SGSM3-209ENST00000478085 AFG1LQ8WV93 481 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 TRIM11Q96F44 468 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 EPB41L5Q9HCM4 733 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 NGRNQ9NPE2 291 aaKnown RBP12.73□□□□□ -0.37
SGSM3-209ENST00000478085 TFR2Q9UP52 801 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 IER5Q5VY09 327 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 CCDC117Q8IWD4 279 aaPredicted RBP12.73□□□□□ -0.37
SGSM3-209ENST00000478085 RDM1Q8NG50 284 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 IL31RAQ8NI17 732 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 ANKRD7Q92527 254 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 TBX20Q9UMR3 447 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 LRRD1A4D1F6 860 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 EIF3CLB5ME19 914 aaKnown RBP12.73□□□□□ -0.37
SGSM3-209ENST00000478085 PGRMC1O00264 195 aaKnown RBP12.73□□□□□ -0.37
SGSM3-209ENST00000478085 MAGEB2O15479 319 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 SOX5P35711 763 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 SARSP49591 514 aaKnown RBP12.73□□□□□ -0.37
SGSM3-209ENST00000478085 ZRSR2Q15696 482 aaKnown RBP12.73□□□□□ -0.37
SGSM3-209ENST00000478085 CBWD2Q8IUF1 395 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 NME8Q8N427 588 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.73□□□□□ -0.37
SGSM3-209ENST00000478085 EIF3CQ99613 913 aaKnown RBP12.73□□□□□ -0.37
SGSM3-209ENST00000478085 TRIM10Q9UDY6 481 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 SLC26A4O43511 780 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 TBC1D8O95759 1140 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 TMEM132BQ14DG7 1078 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 DGKDQ16760 1214 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 KRT71Q3SY84 523 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 ZNF720Q7Z2F6 126 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 ACAP3Q96P50 834 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 APEX2Q9UBZ4 518 aa12.73□□□□□ -0.37
SGSM3-209ENST00000478085 IGSF9BQ9UPX0 1349 aa12.72□□□□□ -0.37
SGSM3-209ENST00000478085 LRP6O75581 1613 aa12.72□□□□□ -0.37
SGSM3-209ENST00000478085 AHDC1Q5TGY3 1603 aaPredicted RBP12.72□□□□□ -0.37
SGSM3-209ENST00000478085 HEXIM1O94992 359 aaKnown RBP12.72□□□□□ -0.37
SGSM3-209ENST00000478085 GNA15P30679 374 aa12.72□□□□□ -0.37
SGSM3-209ENST00000478085 GPC5P78333 572 aa12.72□□□□□ -0.37
SGSM3-209ENST00000478085 BRD3Q15059 726 aa12.72□□□□□ -0.37
SGSM3-209ENST00000478085 CLUL1Q15846 466 aa12.72□□□□□ -0.37
SGSM3-209ENST00000478085 GLIS3Q8NEA6 775 aa12.72□□□□□ -0.37
SGSM3-209ENST00000478085 FAM76AQ8TAV0 307 aa12.72□□□□□ -0.37
SGSM3-209ENST00000478085 EDEM3Q9BZQ6 932 aa12.72□□□□□ -0.37
SGSM3-209ENST00000478085 AGAP1Q9UPQ3 857 aa12.72□□□□□ -0.37
SGSM3-209ENST00000478085 ALS2Q96Q42 1657 aa12.72□□□□□ -0.37
SGSM3-209ENST00000478085 H7C0C1 242 aa12.72□□□□□ -0.37
SGSM3-209ENST00000478085 EIF3DO15371 548 aaKnown RBP eCLIP12.72□□□□□ -0.37
SGSM3-209ENST00000478085 CTIFO43310 598 aaKnown RBP12.72□□□□□ -0.37
SGSM3-209ENST00000478085 EVI5O60447 810 aa12.72□□□□□ -0.37
SGSM3-209ENST00000478085 SEC31AO94979 1220 aaKnown RBP12.72□□□□□ -0.37
SGSM3-209ENST00000478085 ITGB5P18084 799 aa12.72□□□□□ -0.37
SGSM3-209ENST00000478085 RFC5P40937 340 aa12.72□□□□□ -0.37
SGSM3-209ENST00000478085 ATP5OP48047 213 aa12.72□□□□□ -0.37
SGSM3-209ENST00000478085 E2F4Q16254 413 aa12.72□□□□□ -0.37
SGSM3-209ENST00000478085 VSIG10LQ86VR7 867 aa12.72□□□□□ -0.37
SGSM3-209ENST00000478085 KCTD17Q8N5Z5 321 aa12.72□□□□□ -0.37
SGSM3-209ENST00000478085 ARFGAP2Q8N6H7 521 aa12.72□□□□□ -0.37
SGSM3-209ENST00000478085 WDR18Q9BV38 432 aa12.72□□□□□ -0.37
SGSM3-209ENST00000478085 SLC16A3O15427 465 aaKnown RBP12.72□□□□□ -0.37
SGSM3-209ENST00000478085 HUS1O60921 280 aa12.72□□□□□ -0.37
SGSM3-209ENST00000478085 AKAP3O75969 853 aa12.72□□□□□ -0.37
SGSM3-209ENST00000478085 SNHG28P0DPA3 235 aa12.72□□□□□ -0.37
SGSM3-209ENST00000478085 KLRC1P26715 233 aa12.72□□□□□ -0.37
SGSM3-209ENST00000478085 EPC2Q52LR7 807 aa12.72□□□□□ -0.37
SGSM3-209ENST00000478085 RHOT2Q8IXI1 618 aa12.72□□□□□ -0.37
SGSM3-209ENST00000478085 C4orf19Q8IY42 314 aa12.72□□□□□ -0.37
SGSM3-209ENST00000478085 BEST2Q8NFU1 509 aa12.72□□□□□ -0.37
SGSM3-209ENST00000478085 SLC30A5Q8TAD4 765 aa12.72□□□□□ -0.37
SGSM3-209ENST00000478085 TSNARE1Q96NA8 513 aa12.72□□□□□ -0.37
SGSM3-209ENST00000478085 RIPK3Q9Y572 518 aa12.72□□□□□ -0.37
SGSM3-209ENST00000478085 ATP9AO75110 1047 aa12.71□□□□□ -0.37
SGSM3-209ENST00000478085 SF3A3Q12874 501 aaKnown RBP eCLIP12.71□□□□□ -0.372e-7■■■□□ 19.1
SGSM3-209ENST00000478085 NCOA4Q13772 614 aa12.71□□□□□ -0.37
SGSM3-209ENST00000478085 BTNL9Q6UXG8 535 aa12.71□□□□□ -0.37
SGSM3-209ENST00000478085 MAP7D3Q8IWC1 876 aa12.71□□□□□ -0.37
SGSM3-209ENST00000478085 DNERQ8NFT8 737 aa12.71□□□□□ -0.37
SGSM3-209ENST00000478085 EPC1Q9H2F5 836 aa12.71□□□□□ -0.37
SGSM3-209ENST00000478085 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.71□□□□□ -0.37
SGSM3-209ENST00000478085 A6NJR5 290 aa12.71□□□□□ -0.37
SGSM3-209ENST00000478085 STK10O94804 968 aaKnown RBP12.71□□□□□ -0.37
SGSM3-209ENST00000478085 FGGP02679 453 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms