RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 SEC16BQ96JE7 1060 aa11.19□□□□□ -0.62
ABCF1-201ENST00000326195 SNX12Q9UMY4 172 aa11.19□□□□□ -0.62
ABCF1-201ENST00000326195 TRPC6Q9Y210 931 aa11.19□□□□□ -0.62
ABCF1-201ENST00000326195 NOP56O00567 594 aaKnown RBP11.19□□□□□ -0.62
ABCF1-201ENST00000326195 TXNP10599 105 aaKnown RBP11.19□□□□□ -0.62
ABCF1-201ENST00000326195 PLCG1P19174 1290 aa11.19□□□□□ -0.62
ABCF1-201ENST00000326195 SMARCA1P28370 1054 aa11.19□□□□□ -0.62
ABCF1-201ENST00000326195 CFAP58Q5T655 872 aa11.19□□□□□ -0.62
ABCF1-201ENST00000326195 EMBQ6PCB8 327 aa11.19□□□□□ -0.62
ABCF1-201ENST00000326195 TNFRSF25Q93038 417 aa11.19□□□□□ -0.62
ABCF1-201ENST00000326195 LIMA1Q9UHB6 759 aaKnown RBP11.19□□□□□ -0.62
ABCF1-201ENST00000326195 ASTN1O14525 1302 aa11.19□□□□□ -0.62
ABCF1-201ENST00000326195 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.18□□□□□ -0.62
ABCF1-201ENST00000326195 POTEFA5A3E0 1075 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 BUB1BO60566 1050 aaPredicted RBP11.18□□□□□ -0.62
ABCF1-201ENST00000326195 PLEKP08567 350 aaPredicted RBP11.18□□□□□ -0.62
ABCF1-201ENST00000326195 BEX3Q00994 111 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 EMC10Q5UCC4 262 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 POTEGQ6S5H5 508 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 ARMCX2Q7L311 632 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 RSRC1Q96IZ7 334 aaKnown RBP11.18□□□□□ -0.62
ABCF1-201ENST00000326195 ATP6V1G3Q96LB4 118 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 ACTR5Q9H9F9 607 aaPredicted RBP11.18□□□□□ -0.62
ABCF1-201ENST00000326195 EBF2Q9HAK2 575 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 LRRC4CQ9HCJ2 640 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 CNOT8Q9UFF9 292 aaKnown RBP11.18□□□□□ -0.62
ABCF1-201ENST00000326195 KIAA1024Q9UPX6 916 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 POTEB3A0JP26 581 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 GMNCA6NCL1 334 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 EDIL3O43854 480 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 GGPS1O95749 300 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 PGK1P00558 417 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 FOSP01100 380 aaPredicted RBP11.18□□□□□ -0.62
ABCF1-201ENST00000326195 EEF1GP26641 437 aaKnown RBP11.18□□□□□ -0.62
ABCF1-201ENST00000326195 SLC8A1P32418 973 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 NT5C2P49902 561 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 ALDH5A1P51649 535 aaPredicted RBP11.18□□□□□ -0.62
ABCF1-201ENST00000326195 TRAF1Q13077 416 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 DRP2Q13474 957 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 FAM110CQ1W6H9 321 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 POTEBQ6S5H4 581 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 TCP11Q8WWU5 503 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 ZCWPW1Q9H0M4 648 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 EHMT1Q9H9B1 1298 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 FAM207AQ9NSI2 230 aaPredicted RBP11.18□□□□□ -0.62
ABCF1-201ENST00000326195 CPSF2Q9P2I0 782 aaKnown RBP11.18□□□□□ -0.62
ABCF1-201ENST00000326195 RASSF10A6NK89 507 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 A6NNZ2 444 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 DCDC2CA8MYV0 355 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 GPR25O00155 361 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 EML1O00423 815 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 SMNDC1O75940 238 aaKnown RBP eCLIP11.18□□□□□ -0.62
ABCF1-201ENST00000326195 SNUPNO95149 360 aaKnown RBP11.18□□□□□ -0.62
ABCF1-201ENST00000326195 CCND2P30279 289 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 TKFCQ3LXA3 575 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 TUBB8Q3ZCM7 444 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 CAPRIN2Q6IMN6 1127 aaKnown RBP11.18□□□□□ -0.62
ABCF1-201ENST00000326195 IRF2BP1Q8IU81 584 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 C3orf20Q8ND61 904 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 CHST13Q8NET6 341 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 CCT6BQ92526 530 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 HVCN1Q96D96 273 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 LUC7LQ9NQ29 371 aaKnown RBP11.18□□□□□ -0.62
ABCF1-201ENST00000326195 PANK4Q9NVE7 773 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 FLRT1Q9NZU1 646 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 FBXO40Q9UH90 709 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 GGA2Q9UJY4 613 aa11.18□□□□□ -0.62
ABCF1-201ENST00000326195 E9PMD0 336 aa11.17□□□□□ -0.62
ABCF1-201ENST00000326195 MAP3K13O43283 966 aa11.17□□□□□ -0.62
ABCF1-201ENST00000326195 MOCS3O95396 460 aa11.17□□□□□ -0.62
ABCF1-201ENST00000326195 SLC25A27O95847 323 aa11.17□□□□□ -0.62
ABCF1-201ENST00000326195 RAB27AP51159 221 aa11.17□□□□□ -0.62
ABCF1-201ENST00000326195 LBX1P52954 281 aa11.17□□□□□ -0.62
ABCF1-201ENST00000326195 SP2Q02086 613 aa11.17□□□□□ -0.62
ABCF1-201ENST00000326195 PPP1R7Q15435 360 aa11.17□□□□□ -0.62
ABCF1-201ENST00000326195 HPS3Q969F9 1004 aa11.17□□□□□ -0.62
ABCF1-201ENST00000326195 CNOT6LQ96LI5 555 aaKnown RBP11.17□□□□□ -0.62
ABCF1-201ENST00000326195 EPB41L5Q9HCM4 733 aa11.17□□□□□ -0.62
ABCF1-201ENST00000326195 LAD1O00515 517 aa11.17□□□□□ -0.62
ABCF1-201ENST00000326195 TACC1O75410 805 aa11.17□□□□□ -0.62
ABCF1-201ENST00000326195 ARIH2O95376 493 aa11.17□□□□□ -0.62
ABCF1-201ENST00000326195 CLTAP09496 248 aa11.17□□□□□ -0.62
ABCF1-201ENST00000326195 PECAM1P16284 738 aaPredicted RBP11.17□□□□□ -0.62
ABCF1-201ENST00000326195 RPS6KA3P51812 740 aa11.17□□□□□ -0.62
ABCF1-201ENST00000326195 SOX10P56693 466 aa11.17□□□□□ -0.62
ABCF1-201ENST00000326195 SWSAP1Q6NVH7 229 aa11.17□□□□□ -0.62
ABCF1-201ENST00000326195 MIER3Q7Z3K6 550 aa11.17□□□□□ -0.62
ABCF1-201ENST00000326195 CCDC50Q8IVM0 306 aa11.17□□□□□ -0.62
ABCF1-201ENST00000326195 HAS1Q92839 578 aa11.17□□□□□ -0.62
ABCF1-201ENST00000326195 DNAJC7Q99615 494 aa11.17□□□□□ -0.62
ABCF1-201ENST00000326195 C15orf41Q9Y2V0 281 aa11.17□□□□□ -0.62
ABCF1-201ENST00000326195 NKRFO15226 690 aaKnown RBP eCLIP11.17□□□□□ -0.62
ABCF1-201ENST00000326195 TRAPPC3O43617 180 aa11.17□□□□□ -0.62
ABCF1-201ENST00000326195 LINGO3P0C6S8 592 aa11.17□□□□□ -0.62
ABCF1-201ENST00000326195 PPP1R2P41236 205 aa11.17□□□□□ -0.62
ABCF1-201ENST00000326195 PAFAH1B1P43034 410 aa11.17□□□□□ -0.62
ABCF1-201ENST00000326195 RWDD2BP57060 319 aa11.17□□□□□ -0.62
ABCF1-201ENST00000326195 LACTBP83111 547 aaPredicted RBP11.17□□□□□ -0.62
ABCF1-201ENST00000326195 GUCY2DQ02846 1103 aa11.17□□□□□ -0.62
ABCF1-201ENST00000326195 PSMD2Q13200 908 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms