RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C PAC10P48363 199 aa8.82□□□□□ -1
SPT20YOL148C RCR2Q03446 210 aaKnown RBP8.82□□□□□ -1
SPT20YOL148C NDD1Q08887 554 aa8.82□□□□□ -1
SPT20YOL148C YPR145C-AQ2V2P0 78 aa8.82□□□□□ -1
SPT20YOL148C CAN1P04817 590 aa8.82□□□□□ -1
SPT20YOL148C HTS1P07263 546 aaKnown RBP8.82□□□□□ -1
SPT20YOL148C SEC12P11655 471 aa8.82□□□□□ -1
SPT20YOL148C CDC34P14682 295 aa8.82□□□□□ -1
SPT20YOL148C AFT1P22149 690 aa8.82□□□□□ -1
SPT20YOL148C SEC22P22214 214 aa8.82□□□□□ -1
SPT20YOL148C ATS1P31386 333 aa8.82□□□□□ -1
SPT20YOL148C MET28P40573 187 aa8.82□□□□□ -1
SPT20YOL148C SNM1P40993 198 aa8.82□□□□□ -1
SPT20YOL148C BUL1P48524 976 aa8.82□□□□□ -1
SPT20YOL148C FRE4P53746 719 aa8.82□□□□□ -1
SPT20YOL148C YMR315WQ04869 349 aaKnown RBP8.82□□□□□ -1
SPT20YOL148C HOF1Q05080 669 aa8.82□□□□□ -1
SPT20YOL148C BRX1Q08235 291 aaKnown RBP8.82□□□□□ -1
SPT20YOL148C YCL001W-BQ96VH2 84 aa8.82□□□□□ -1
SPT20YOL148C PTH1P38876 190 aaKnown RBP8.81□□□□□ -1
SPT20YOL148C LNP1P38878 278 aa8.81□□□□□ -1
SPT20YOL148C TOK1P40310 691 aa8.81□□□□□ -1
SPT20YOL148C NNF1P47149 201 aa8.81□□□□□ -1
SPT20YOL148C PKP2P53170 491 aa8.81□□□□□ -1
SPT20YOL148C LAP3Q01532 483 aaKnown RBP RIP-Chip data8.81□□□□□ -1not detected
SPT20YOL148C YMR252CQ04814 134 aa8.81□□□□□ -1
SPT20YOL148C NOC4Q06512 552 aaPredicted RBP8.81□□□□□ -1
SPT20YOL148C PML1Q07930 204 aaPredicted RBP8.81□□□□□ -1
SPT20YOL148C FRE6Q12473 712 aa8.81□□□□□ -1
SPT20YOL148C RPL25P04456 142 aaKnown RBP8.8□□□□□ -1
SPT20YOL148C MSK1P32048 576 aa8.8□□□□□ -1
SPT20YOL148C RPD3P32561 433 aa8.8□□□□□ -1
SPT20YOL148C DTR1P38125 572 aa8.8□□□□□ -1
SPT20YOL148C THI2P38141 450 aa8.8□□□□□ -1
SPT20YOL148C PNT1P38969 423 aa8.8□□□□□ -1
SPT20YOL148C PTC2P39966 464 aaKnown RBP8.8□□□□□ -1
SPT20YOL148C MNT3P40549 630 aa8.8□□□□□ -1
SPT20YOL148C YHC3P47040 408 aa8.8□□□□□ -1
SPT20YOL148C IBA57P47158 497 aa8.8□□□□□ -1
SPT20YOL148C PUS4P48567 403 aaKnown RBP8.8□□□□□ -1
SPT20YOL148C COS12P53053 380 aa8.8□□□□□ -1
SPT20YOL148C MDM34P53083 459 aa8.8□□□□□ -1
SPT20YOL148C YGR015CP53208 328 aa8.8□□□□□ -1
SPT20YOL148C YGR079WP53249 370 aa8.8□□□□□ -1
SPT20YOL148C YNR062CP53748 327 aa8.8□□□□□ -1
SPT20YOL148C NDJ1Q12366 352 aa8.8□□□□□ -1
SPT20YOL148C HMS1Q12398 434 aa8.8□□□□□ -1
SPT20YOL148C POX1P13711 748 aa8.8□□□□□ -1
SPT20YOL148C APA1P16550 321 aaKnown RBP8.8□□□□□ -1
SPT20YOL148C MRPL8P22353 238 aa8.8□□□□□ -1
SPT20YOL148C IDH2P28241 369 aaKnown RBP8.8□□□□□ -1
SPT20YOL148C MET22P32179 357 aa8.8□□□□□ -1
SPT20YOL148C PAU2P32612 120 aa8.8□□□□□ -1
SPT20YOL148C YNK1P36010 153 aaKnown RBP8.8□□□□□ -1
SPT20YOL148C BSD2P38356 321 aa8.8□□□□□ -1
SPT20YOL148C PIG2P40187 538 aa8.8□□□□□ -1
SPT20YOL148C RSM27P53305 110 aa8.8□□□□□ -1
SPT20YOL148C MEP3P53390 489 aa8.8□□□□□ -1
SPT20YOL148C RPL34AP87262 121 aaPredicted RBP8.8□□□□□ -1
SPT20YOL148C SWF1Q04629 336 aa8.8□□□□□ -1
SPT20YOL148C ECM22Q05958 814 aaPredicted RBP8.8□□□□□ -1
SPT20YOL148C CYK3Q07533 885 aa8.8□□□□□ -1
SPT20YOL148C YLR012CQ07927 99 aa8.8□□□□□ -1
SPT20YOL148C YJR112W-AQ3E743 109 aa8.8□□□□□ -1
SPT20YOL148C HAP2P06774 265 aa8.79□□□□□ -1
SPT20YOL148C PHO2P07269 559 aa8.79□□□□□ -1
SPT20YOL148C RPB3P16370 318 aaKnown RBP8.79□□□□□ -1
SPT20YOL148C ADE1P27616 306 aa8.79□□□□□ -1
SPT20YOL148C HXT4P32467 576 aa8.79□□□□□ -1
SPT20YOL148C SRO77P38163 1010 aa8.79□□□□□ -1
SPT20YOL148C EMC5P40540 141 aa8.79□□□□□ -1
SPT20YOL148C VMA21P41806 77 aa8.79□□□□□ -1
SPT20YOL148C BIO5P53744 561 aaKnown RBP8.79□□□□□ -1
SPT20YOL148C MAP1Q01662 387 aaKnown RBP RIP-Chip data8.79□□□□□ -1not detected
SPT20YOL148C MRPS17Q03246 237 aaPredicted RBP8.79□□□□□ -1
SPT20YOL148C YDR387CQ04162 555 aa8.79□□□□□ -1
SPT20YOL148C HLR1Q04429 423 aa8.79□□□□□ -1
SPT20YOL148C BOP2Q06150 570 aa8.79□□□□□ -1
SPT20YOL148C PEX30Q06169 523 aa8.79□□□□□ -1
SPT20YOL148C CRT10Q08226 957 aa8.79□□□□□ -1
SPT20YOL148C YDL007C-AQ2V2Q0 85 aa8.79□□□□□ -1
SPT20YOL148C YGR161W-CQ3E744 92 aa8.79□□□□□ -1
SPT20YOL148C STT4P37297 1900 aa8.79□□□□□ -1
SPT20YOL148C SOD2P00447 233 aa8.78□□□□□ -1
SPT20YOL148C MKK1P32490 508 aa8.78□□□□□ -1
SPT20YOL148C CSE2P33308 149 aa8.78□□□□□ -1
SPT20YOL148C SPT10P35208 640 aa8.78□□□□□ -1
SPT20YOL148C PHO11P35842 467 aa8.78□□□□□ -1
SPT20YOL148C KAE1P36132 386 aa8.78□□□□□ -1
SPT20YOL148C PHO12P38693 467 aa8.78□□□□□ -1
SPT20YOL148C DAN1P47178 298 aa8.78□□□□□ -1
SPT20YOL148C MNN10P50108 393 aaKnown RBP8.78□□□□□ -1
SPT20YOL148C COG7P53195 279 aa8.78□□□□□ -1
SPT20YOL148C YNR065CP53751 1116 aa8.78□□□□□ -1
SPT20YOL148C PGA1P53896 198 aa8.78□□□□□ -1
SPT20YOL148C TPP1Q03796 238 aa8.78□□□□□ -1
SPT20YOL148C SMA2Q04658 369 aa8.78□□□□□ -1
SPT20YOL148C RAD28Q12021 506 aa8.78□□□□□ -1
SPT20YOL148C YPR015CQ12531 247 aa8.78□□□□□ -1
SPT20YOL148C SST2P11972 698 aaKnown RBP8.77□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms