RNA–Protein interactions for RNA: YNL248C

RPA49, Transcript of RNA polymerase I subunit A49, yeastyeast

Gene RPA49, Length 1,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA49YNL248C AAC3P18238 307 aa4.79□□□□□ -1.64
RPA49YNL248C ERD2P18414 219 aa4.79□□□□□ -1.64
RPA49YNL248C PRE7P23724 241 aaKnown RBP4.79□□□□□ -1.64
RPA49YNL248C ITR1P30605 584 aa4.79□□□□□ -1.64
RPA49YNL248C SNC1P31109 117 aa4.79□□□□□ -1.64
RPA49YNL248C YEF1P32622 495 aa4.79□□□□□ -1.64
RPA49YNL248C CDC13P32797 924 aaKnown RBP4.79□□□□□ -1.64
RPA49YNL248C PPQ1P32945 549 aa4.79□□□□□ -1.64
RPA49YNL248C ECM15P35195 104 aa4.79□□□□□ -1.64
RPA49YNL248C YKL063CP35725 167 aa4.79□□□□□ -1.64
RPA49YNL248C SRX1P36077 127 aa4.79□□□□□ -1.64
RPA49YNL248C PAU24P38155 120 aa4.79□□□□□ -1.64
RPA49YNL248C PHO90P39535 881 aa4.79□□□□□ -1.64
RPA49YNL248C YEL068CP39977 110 aa4.79□□□□□ -1.64
RPA49YNL248C SMK1P41808 388 aa4.79□□□□□ -1.64
RPA49YNL248C PAM16P42949 149 aa4.79□□□□□ -1.64
RPA49YNL248C ALK1P43633 760 aaKnown RBP4.79□□□□□ -1.64
RPA49YNL248C SFH5P47008 294 aa4.79□□□□□ -1.64
RPA49YNL248C PAU12P53343 120 aa4.79□□□□□ -1.64
RPA49YNL248C RPL6AQ02326 176 aaKnown RBP4.79□□□□□ -1.64
RPA49YNL248C NGL2Q03264 515 aaKnown RBP4.79□□□□□ -1.64
RPA49YNL248C AIM36Q03798 255 aa4.79□□□□□ -1.64
RPA49YNL248C SPC19Q03954 165 aa4.79□□□□□ -1.64
RPA49YNL248C RRN11Q04712 507 aa4.79□□□□□ -1.64
RPA49YNL248C RBS1Q05672 457 aaKnown RBP4.79□□□□□ -1.64
RPA49YNL248C YPR172WQ06608 200 aa4.79□□□□□ -1.64
RPA49YNL248C SYO1Q07395 620 aa4.79□□□□□ -1.64
RPA49YNL248C THI73Q07904 523 aa4.79□□□□□ -1.64
RPA49YNL248C BRX1Q08235 291 aaKnown RBP4.79□□□□□ -1.64
RPA49YNL248C GUP2Q08929 609 aa4.79□□□□□ -1.64
RPA49YNL248C BBP1Q12365 385 aa4.79□□□□□ -1.64
RPA49YNL248C HTZ1Q12692 134 aaKnown RBP4.79□□□□□ -1.64
RPA49YNL248C MEX67Q99257 599 aaKnown RBP4.79□□□□□ -1.64
RPA49YNL248C CYC1P00044 109 aaPredicted RBP4.78□□□□□ -1.64
RPA49YNL248C RAD52P06778 471 aaKnown RBP4.78□□□□□ -1.64
RPA49YNL248C SPS2P08459 502 aa4.78□□□□□ -1.64
RPA49YNL248C PET54P10834 293 aa4.78□□□□□ -1.64
RPA49YNL248C STE12P13574 688 aa4.78□□□□□ -1.64
RPA49YNL248C HOM2P13663 365 aaKnown RBP4.78□□□□□ -1.64
RPA49YNL248C RPA135P22138 1203 aaKnown RBP4.78□□□□□ -1.64
RPA49YNL248C YMC1P32331 307 aa4.78□□□□□ -1.64
RPA49YNL248C MTH1P35198 433 aa4.78□□□□□ -1.64
RPA49YNL248C PFS1P38872 237 aa4.78□□□□□ -1.64
RPA49YNL248C HRB1P38922 454 aaKnown RBP RIP-Chip data4.78□□□□□ -1.64not detected
RPA49YNL248C YNL195CP40168 261 aa4.78□□□□□ -1.64
RPA49YNL248C BNA6P43619 295 aa4.78□□□□□ -1.64
RPA49YNL248C CIS3P47001 227 aa4.78□□□□□ -1.64
RPA49YNL248C TIM54P47045 478 aa4.78□□□□□ -1.64
RPA49YNL248C APS3P47064 194 aa4.78□□□□□ -1.64
RPA49YNL248C PMT5P52867 743 aa4.78□□□□□ -1.64
RPA49YNL248C TPC1P53257 314 aa4.78□□□□□ -1.64
RPA49YNL248C RNH70P53331 553 aa4.78□□□□□ -1.64
RPA49YNL248C OGG1P53397 376 aaPredicted RBP4.78□□□□□ -1.64
RPA49YNL248C SWS2P53937 143 aa4.78□□□□□ -1.64
RPA49YNL248C MSS11Q03825 758 aa4.78□□□□□ -1.64
RPA49YNL248C YMR252CQ04814 134 aa4.78□□□□□ -1.64
RPA49YNL248C SNT309Q06091 175 aaPredicted RBP4.78□□□□□ -1.64
RPA49YNL248C ALG6Q12001 544 aaKnown RBP4.78□□□□□ -1.64
RPA49YNL248C YOR289WQ12012 251 aaPredicted RBP4.78□□□□□ -1.64
RPA49YNL248C DET1Q99288 334 aaKnown RBP4.78□□□□□ -1.64
RPA49YNL248C GAL4P04386 881 aa4.77□□□□□ -1.65
RPA49YNL248C CAN1P04817 590 aa4.77□□□□□ -1.65
RPA49YNL248C CDC9P04819 755 aa4.77□□□□□ -1.65
RPA49YNL248C HIS3P06633 220 aa4.77□□□□□ -1.65
RPA49YNL248C TY1A-LR4P0C2I8 440 aaKnown RBP4.77□□□□□ -1.65
RPA49YNL248C TY1A-DR6P0CX70 440 aa4.77□□□□□ -1.65
RPA49YNL248C TY1A-ER1P0CX71 440 aa4.77□□□□□ -1.65
RPA49YNL248C TY1A-LR2P0CX72 440 aa4.77□□□□□ -1.65
RPA49YNL248C TY1A-PLP0CX73 440 aa4.77□□□□□ -1.65
RPA49YNL248C TY1A-JR1P0CX74 440 aa4.77□□□□□ -1.65
RPA49YNL248C TY1A-LR3P0CX75 440 aa4.77□□□□□ -1.65
RPA49YNL248C TY1A-ML2P0CX76 440 aa4.77□□□□□ -1.65
RPA49YNL248C HMG1P12683 1054 aa4.77□□□□□ -1.65
RPA49YNL248C GAS1P22146 559 aaKnown RBP4.77□□□□□ -1.65
RPA49YNL248C BOS1P25385 244 aa4.77□□□□□ -1.65
RPA49YNL248C YCR016WP25617 290 aaKnown RBP4.77□□□□□ -1.65
RPA49YNL248C KRE6P32486 720 aa4.77□□□□□ -1.65
RPA49YNL248C DOA4P32571 926 aa4.77□□□□□ -1.65
RPA49YNL248C NRP1P32770 719 aaKnown RBP RIP-Chip data4.77□□□□□ -1.65not detected
RPA49YNL248C PTR2P32901 601 aa4.77□□□□□ -1.65
RPA49YNL248C VPS17P32913 551 aa4.77□□□□□ -1.65
RPA49YNL248C ECT1P33412 323 aa4.77□□□□□ -1.65
RPA49YNL248C ANR2P36090 516 aaPredicted RBP4.77□□□□□ -1.65
RPA49YNL248C THI2P38141 450 aa4.77□□□□□ -1.65
RPA49YNL248C CCZ1P38273 704 aa4.77□□□□□ -1.65
RPA49YNL248C PZF1P39933 429 aa4.77□□□□□ -1.65
RPA49YNL248C ICE2P40499 491 aa4.77□□□□□ -1.65
RPA49YNL248C DPB11P47027 764 aaPredicted RBP4.77□□□□□ -1.65
RPA49YNL248C YNR062CP53748 327 aa4.77□□□□□ -1.65
RPA49YNL248C CWC24P53769 259 aa4.77□□□□□ -1.65
RPA49YNL248C PLB2Q03674 706 aa4.77□□□□□ -1.65
RPA49YNL248C SEC13Q04491 297 aaKnown RBP4.77□□□□□ -1.65
RPA49YNL248C SMA2Q04658 369 aa4.77□□□□□ -1.65
RPA49YNL248C PHO92Q06390 306 aa4.77□□□□□ -1.65
RPA49YNL248C TPO3Q06451 622 aa4.77□□□□□ -1.65
RPA49YNL248C RRP9Q06506 573 aaKnown RBP4.77□□□□□ -1.65
RPA49YNL248C SSK1Q07084 712 aa4.77□□□□□ -1.65
RPA49YNL248C FMP40Q08968 688 aaPredicted RBP4.77□□□□□ -1.65
RPA49YNL248C TY1A-GR1Q12085 440 aa4.77□□□□□ -1.65
RPA49YNL248C DAP1Q12091 152 aa4.77□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms