RNA–Protein interactions for RNA: YLR353W

BUD8, Transcript of Protein involved in bud-site selection, yeast

Gene BUD8, Length 1,812 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BUD8	YLR353W	MGR3	Q04472	501 aa		4.17	□□□□□ -1.74
BUD8	YLR353W	SLD7	Q08457	257 aa		4.17	□□□□□ -1.74
BUD8	YLR353W	MUM3	Q08750	479 aa		4.17	□□□□□ -1.74
BUD8	YLR353W	MSH5	Q12175	901 aa		4.17	□□□□□ -1.74
BUD8	YLR353W	SSA3	P09435	649 aa	Known RBP	4.16	□□□□□ -1.74
BUD8	YLR353W	ASK1	P35734	292 aa		4.16	□□□□□ -1.74
BUD8	YLR353W	FRE2	P36033	711 aa		4.16	□□□□□ -1.74
BUD8	YLR353W	RSM22	P36056	628 aa		4.16	□□□□□ -1.74
BUD8	YLR353W	MRPL40	P36534	297 aa		4.16	□□□□□ -1.74
BUD8	YLR353W	YCR041W	P37265	110 aa		4.16	□□□□□ -1.74
BUD8	YLR353W	MRP21	P38175	177 aa		4.16	□□□□□ -1.74
BUD8	YLR353W	HPM1	P40481	377 aa		4.16	□□□□□ -1.74
BUD8	YLR353W	GCD10	P41814	478 aa		4.16	□□□□□ -1.74
BUD8	YLR353W	ELP2	P42935	788 aa		4.16	□□□□□ -1.74
BUD8	YLR353W	CIS3	P47001	227 aa		4.16	□□□□□ -1.74
BUD8	YLR353W	SHE4	P51534	789 aa		4.16	□□□□□ -1.74
BUD8	YLR353W	AIF1	P52923	378 aa		4.16	□□□□□ -1.74
BUD8	YLR353W	NOP19	P53317	196 aa	Predicted RBP	4.16	□□□□□ -1.74
BUD8	YLR353W	YNL143C	P53908	130 aa		4.16	□□□□□ -1.74
BUD8	YLR353W	GPI15	P53961	229 aa		4.16	□□□□□ -1.74
BUD8	YLR353W	LSM3	P57743	89 aa	Known RBP	4.16	□□□□□ -1.74
BUD8	YLR353W	SRL4	Q03085	281 aa		4.16	□□□□□ -1.74
BUD8	YLR353W	YMR226C	Q05016	267 aa	Known RBP	4.16	□□□□□ -1.74
BUD8	YLR353W	YLR281C	Q05863	155 aa		4.16	□□□□□ -1.74
BUD8	YLR353W	GMC2	Q06201	188 aa		4.16	□□□□□ -1.74
BUD8	YLR353W	IPK1	Q06667	281 aa		4.16	□□□□□ -1.74
BUD8	YLR353W	REX4	Q08237	289 aa		4.16	□□□□□ -1.74
BUD8	YLR353W	DDC1	Q08949	612 aa		4.16	□□□□□ -1.74
BUD8	YLR353W	GPM2	Q12008	311 aa		4.16	□□□□□ -1.74
BUD8	YLR353W	HIS1	P00498	297 aa	Known RBP	4.16	□□□□□ -1.74
BUD8	YLR353W	KSS1	P14681	368 aa		4.16	□□□□□ -1.74
BUD8	YLR353W	MET16	P18408	261 aa	Predicted RBP	4.16	□□□□□ -1.74
BUD8	YLR353W	DPB2	P24482	689 aa	Predicted RBP	4.16	□□□□□ -1.74
BUD8	YLR353W	TKL2	P33315	681 aa		4.16	□□□□□ -1.74
BUD8	YLR353W	CYC2	P38909	366 aa		4.16	□□□□□ -1.74
BUD8	YLR353W	FAA2	P39518	744 aa		4.16	□□□□□ -1.74
BUD8	YLR353W	AGP3	P43548	558 aa		4.16	□□□□□ -1.74
BUD8	YLR353W	GWT1	P47026	490 aa		4.16	□□□□□ -1.74
BUD8	YLR353W	EMC2	P47133	292 aa	Known RBP	4.16	□□□□□ -1.74
BUD8	YLR353W	AQR1	P53943	586 aa		4.16	□□□□□ -1.74
BUD8	YLR353W	SKI8	Q02793	397 aa	Predicted RBP	4.16	□□□□□ -1.74
BUD8	YLR353W	SNT309	Q06091	175 aa	Predicted RBP	4.16	□□□□□ -1.74
BUD8	YLR353W	YLR413W	Q06689	675 aa		4.16	□□□□□ -1.74
BUD8	YLR353W	SGT1	Q08446	395 aa		4.16	□□□□□ -1.74
BUD8	YLR353W	ESA1	Q08649	445 aa		4.16	□□□□□ -1.74
BUD8	YLR353W	MDY2	Q12285	212 aa		4.16	□□□□□ -1.74
BUD8	YLR353W	HEM2	P05373	342 aa		4.15	□□□□□ -1.75
BUD8	YLR353W	ILV5	P06168	395 aa	Known RBP	4.15	□□□□□ -1.75
BUD8	YLR353W	NFT1	P0CE68	1218 aa		4.15	□□□□□ -1.75
BUD8	YLR353W	YAR066W	P0CX18	203 aa		4.15	□□□□□ -1.75
BUD8	YLR353W	YHR214W	P0CX19	203 aa		4.15	□□□□□ -1.75
BUD8	YLR353W	SNF4	P12904	322 aa		4.15	□□□□□ -1.75
BUD8	YLR353W	RPB4	P20433	221 aa	Predicted RBP	4.15	□□□□□ -1.75
BUD8	YLR353W	FAR1	P21268	830 aa		4.15	□□□□□ -1.75
BUD8	YLR353W	DBR1	P24309	405 aa	Known RBP	4.15	□□□□□ -1.75
BUD8	YLR353W	CYS4	P32582	507 aa	Known RBP	4.15	□□□□□ -1.75
BUD8	YLR353W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
BUD8	YLR353W	YBR241C	P38142	488 aa		4.15	□□□□□ -1.75
BUD8	YLR353W	QDR3	P38227	689 aa		4.15	□□□□□ -1.75
BUD8	YLR353W	IST2	P38250	946 aa		4.15	□□□□□ -1.75
BUD8	YLR353W	INM1	P38710	295 aa		4.15	□□□□□ -1.75
BUD8	YLR353W	MNL1	P38888	796 aa		4.15	□□□□□ -1.75
BUD8	YLR353W	LYS1	P38998	373 aa	RIP-Chip data	4.15	□□□□□ -1.75	not detected
BUD8	YLR353W	SEO1	P39709	593 aa		4.15	□□□□□ -1.75
BUD8	YLR353W	HAT2	P39984	401 aa		4.15	□□□□□ -1.75
BUD8	YLR353W	EDC3	P39998	551 aa	Known RBP	4.15	□□□□□ -1.75
BUD8	YLR353W	PAC11	P40960	533 aa		4.15	□□□□□ -1.75
BUD8	YLR353W	GCD14	P46959	383 aa	Predicted RBP	4.15	□□□□□ -1.75
BUD8	YLR353W	RPA34	P47006	233 aa	Predicted RBP	4.15	□□□□□ -1.75
BUD8	YLR353W	EFM3	P47163	339 aa		4.15	□□□□□ -1.75
BUD8	YLR353W	HMS2	P47175	358 aa		4.15	□□□□□ -1.75
BUD8	YLR353W	KEL2	P50090	882 aa		4.15	□□□□□ -1.75
BUD8	YLR353W	CDC14	Q00684	551 aa		4.15	□□□□□ -1.75
BUD8	YLR353W	MMT1	Q03218	510 aa		4.15	□□□□□ -1.75
BUD8	YLR353W	NHP10	Q03435	203 aa		4.15	□□□□□ -1.75
BUD8	YLR353W	YMR034C	Q05131	434 aa	Predicted RBP	4.15	□□□□□ -1.75
BUD8	YLR353W	SKI7	Q08491	747 aa	Predicted RBP	4.15	□□□□□ -1.75
BUD8	YLR353W	YOR342C	Q12182	319 aa		4.15	□□□□□ -1.75
BUD8	YLR353W	ORT1	Q12375	292 aa		4.15	□□□□□ -1.75
BUD8	YLR353W	SAS5	Q99314	248 aa		4.15	□□□□□ -1.75
BUD8	YLR353W	TAD3	Q9URQ3	322 aa		4.15	□□□□□ -1.75
BUD8	YLR353W	CBP2	P03874	630 aa	Predicted RBP	4.14	□□□□□ -1.75
BUD8	YLR353W	CDC21	P06785	304 aa		4.14	□□□□□ -1.75
BUD8	YLR353W	BCY1	P07278	416 aa	Known RBP	4.14	□□□□□ -1.75
BUD8	YLR353W	FBA1	P14540	359 aa	Known RBP	4.14	□□□□□ -1.75
BUD8	YLR353W	AAT2	P23542	418 aa	Known RBP	4.14	□□□□□ -1.75
BUD8	YLR353W	RVS161	P25343	265 aa	Known RBP	4.14	□□□□□ -1.75
BUD8	YLR353W	YCR100C	P25606	316 aa		4.14	□□□□□ -1.75
BUD8	YLR353W	RPS5	P26783	225 aa	Known RBP	4.14	□□□□□ -1.75
BUD8	YLR353W	UTP11	P34247	250 aa	Predicted RBP	4.14	□□□□□ -1.75
BUD8	YLR353W	PTC1	P35182	281 aa		4.14	□□□□□ -1.75
BUD8	YLR353W	MAK5	P38112	773 aa	Predicted RBP	4.14	□□□□□ -1.75
BUD8	YLR353W	KAP104	P38217	918 aa	Known RBP	4.14	□□□□□ -1.75
BUD8	YLR353W	FES1	P38260	290 aa		4.14	□□□□□ -1.75
BUD8	YLR353W	AIM20	P40451	204 aa		4.14	□□□□□ -1.75
BUD8	YLR353W	COA1	P40452	197 aa		4.14	□□□□□ -1.75
BUD8	YLR353W	RAD17	P48581	401 aa		4.14	□□□□□ -1.75
BUD8	YLR353W	GTR2	P53290	341 aa		4.14	□□□□□ -1.75
BUD8	YLR353W	YNR068C	P53754	272 aa		4.14	□□□□□ -1.75
BUD8	YLR353W	YNL033W	P53964	284 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms