RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W SED5Q01590 340 aa1.17□□□□□ -2.22
SLX4YLR135W YPL077CQ02831 240 aa1.17□□□□□ -2.22
SLX4YLR135W TMC1Q08422 150 aaPredicted RBP1.17□□□□□ -2.22
SLX4YLR135W SAM4Q08985 325 aaKnown RBP1.17□□□□□ -2.22
SLX4YLR135W YPL245WQ12179 454 aaKnown RBP1.17□□□□□ -2.22
SLX4YLR135W FMP16Q12497 93 aa1.17□□□□□ -2.22
SLX4YLR135W IZH4Q99393 312 aa1.17□□□□□ -2.22
SLX4YLR135W RPS14AP06367 137 aaKnown RBP1.16□□□□□ -2.22
SLX4YLR135W CBP6P07253 162 aaPredicted RBP1.16□□□□□ -2.22
SLX4YLR135W IFM1P25038 676 aa1.16□□□□□ -2.22
SLX4YLR135W RPL16BP26785 198 aaKnown RBP1.16□□□□□ -2.22
SLX4YLR135W VPH2P32341 215 aa1.16□□□□□ -2.22
SLX4YLR135W SPS19P32573 292 aaKnown RBP1.16□□□□□ -2.22
SLX4YLR135W GCG1P32656 232 aaKnown RBP1.16□□□□□ -2.22
SLX4YLR135W PRS1P32895 427 aaKnown RBP1.16□□□□□ -2.22
SLX4YLR135W RPC37P36121 282 aa1.16□□□□□ -2.22
SLX4YLR135W SDS24P38314 527 aa1.16□□□□□ -2.22
SLX4YLR135W RPS14BP39516 138 aaKnown RBP1.16□□□□□ -2.22
SLX4YLR135W RCY1P39531 840 aa1.16□□□□□ -2.22
SLX4YLR135W PEX22P39718 180 aa1.16□□□□□ -2.22
SLX4YLR135W SLM1P40485 686 aa1.16□□□□□ -2.22
SLX4YLR135W GDS1P41913 522 aa1.16□□□□□ -2.22
SLX4YLR135W UBC13P52490 153 aa1.16□□□□□ -2.22
SLX4YLR135W SDS23P53172 527 aa1.16□□□□□ -2.22
SLX4YLR135W SWC4P53201 476 aa1.16□□□□□ -2.22
SLX4YLR135W TPC1P53257 314 aa1.16□□□□□ -2.22
SLX4YLR135W RMI1Q02685 241 aa1.16□□□□□ -2.22
SLX4YLR135W YMR111CQ04461 462 aaPredicted RBP1.16□□□□□ -2.22
SLX4YLR135W PBP4Q07362 185 aaKnown RBP1.16□□□□□ -2.22
SLX4YLR135W MMT2Q08970 484 aa1.16□□□□□ -2.22
SLX4YLR135W YDR018CQ12185 396 aa1.16□□□□□ -2.22
SLX4YLR135W UTP23Q12339 254 aaKnown RBP1.16□□□□□ -2.22
SLX4YLR135W PRP46Q12417 451 aaPredicted RBP1.16□□□□□ -2.22
SLX4YLR135W MHP1P43638 1398 aa1.16□□□□□ -2.22
SLX4YLR135W STE2D6VTK4 431 aa1.16□□□□□ -2.22
SLX4YLR135W TPI1P00942 248 aaKnown RBP1.16□□□□□ -2.22
SLX4YLR135W BGL2P15703 313 aaKnown RBP1.16□□□□□ -2.22
SLX4YLR135W IES6P32617 166 aa1.16□□□□□ -2.22
SLX4YLR135W SWD2P36104 329 aaPredicted RBP1.16□□□□□ -2.22
SLX4YLR135W YBR241CP38142 488 aa1.16□□□□□ -2.22
SLX4YLR135W NPT1P39683 429 aaKnown RBP1.16□□□□□ -2.22
SLX4YLR135W SHQ1P40486 507 aaPredicted RBP1.16□□□□□ -2.22
SLX4YLR135W STB1P42845 420 aa1.16□□□□□ -2.22
SLX4YLR135W YAR1P46683 200 aa1.16□□□□□ -2.22
SLX4YLR135W EMC2P47133 292 aaKnown RBP1.16□□□□□ -2.22
SLX4YLR135W TIS11P47977 285 aa1.16□□□□□ -2.22
SLX4YLR135W KTR6P54070 446 aa1.16□□□□□ -2.22
SLX4YLR135W HAL1Q01766 294 aa1.16□□□□□ -2.22
SLX4YLR135W MRPS16Q02608 121 aa1.16□□□□□ -2.22
SLX4YLR135W VHS1Q03785 461 aa1.16□□□□□ -2.22
SLX4YLR135W GPN3Q06543 272 aa1.16□□□□□ -2.22
SLX4YLR135W YPQ1Q12010 308 aa1.16□□□□□ -2.22
SLX4YLR135W SRO7Q12038 1033 aa1.16□□□□□ -2.22
SLX4YLR135W RPL21BQ12672 160 aaKnown RBP1.16□□□□□ -2.22
SLX4YLR135W YOL085CQ99345 113 aa1.16□□□□□ -2.22
SLX4YLR135W TDH3P00359 332 aaKnown RBP RIP-Chip data1.15□□□□□ -2.23not detected
SLX4YLR135W RPL24AP04449 155 aaKnown RBP1.15□□□□□ -2.23
SLX4YLR135W ASP3-2P0CX77 362 aa1.15□□□□□ -2.23
SLX4YLR135W ASP3-3P0CX78 362 aa1.15□□□□□ -2.23
SLX4YLR135W ASP3-4P0CX79 362 aa1.15□□□□□ -2.23
SLX4YLR135W ASP3-1P0CZ17 362 aa1.15□□□□□ -2.23
SLX4YLR135W PCL1P24867 279 aa1.15□□□□□ -2.23
SLX4YLR135W YKL063CP35725 167 aa1.15□□□□□ -2.23
SLX4YLR135W GGC1P38988 300 aa1.15□□□□□ -2.23
SLX4YLR135W RRG9P40156 214 aa1.15□□□□□ -2.23
SLX4YLR135W MRX5P47007 382 aa1.15□□□□□ -2.23
SLX4YLR135W YPT32P51996 222 aaKnown RBP1.15□□□□□ -2.23
SLX4YLR135W KAP114P53067 1004 aa1.15□□□□□ -2.23
SLX4YLR135W NRM1P53718 249 aa1.15□□□□□ -2.23
SLX4YLR135W MPP6P53725 186 aaPredicted RBP1.15□□□□□ -2.23
SLX4YLR135W SPP2Q02521 185 aa1.15□□□□□ -2.23
SLX4YLR135W MRX11Q03079 207 aa1.15□□□□□ -2.23
SLX4YLR135W ADD37Q03233 198 aa1.15□□□□□ -2.23
SLX4YLR135W CSI1Q04368 295 aa1.15□□□□□ -2.23
SLX4YLR135W API2Q04413 109 aa1.15□□□□□ -2.23
SLX4YLR135W YDR115WQ04598 105 aa1.15□□□□□ -2.23
SLX4YLR135W YLR446WQ06204 433 aa1.15□□□□□ -2.23
SLX4YLR135W MIM1Q08176 113 aa1.15□□□□□ -2.23
SLX4YLR135W YPR064WQ12492 139 aa1.15□□□□□ -2.23
SLX4YLR135W FOL3Q12676 427 aaPredicted RBP1.15□□□□□ -2.23
SLX4YLR135W LAG2Q92325 660 aa1.15□□□□□ -2.23
SLX4YLR135W SSK22P25390 1331 aaPredicted RBP1.15□□□□□ -2.23
SLX4YLR135W COX2P00410 251 aa1.15□□□□□ -2.23
SLX4YLR135W SOD1P00445 154 aaKnown RBP1.15□□□□□ -2.23
SLX4YLR135W SPS100P13130 326 aa1.15□□□□□ -2.23
SLX4YLR135W CSM1P25651 190 aa1.15□□□□□ -2.23
SLX4YLR135W CYM1P32898 989 aa1.15□□□□□ -2.23
SLX4YLR135W IMP3P32899 183 aaPredicted RBP1.15□□□□□ -2.23
SLX4YLR135W YUH1P35127 236 aa1.15□□□□□ -2.23
SLX4YLR135W TPO5P36029 618 aa1.15□□□□□ -2.23
SLX4YLR135W MRP21P38175 177 aa1.15□□□□□ -2.23
SLX4YLR135W YPC1P38298 316 aa1.15□□□□□ -2.23
SLX4YLR135W WSC4P38739 605 aa1.15□□□□□ -2.23
SLX4YLR135W PET8P38921 284 aa1.15□□□□□ -2.23
SLX4YLR135W SCC4P40090 624 aa1.15□□□□□ -2.23
SLX4YLR135W YGL262WP53054 175 aa1.15□□□□□ -2.23
SLX4YLR135W LSB1P53281 241 aa1.15□□□□□ -2.23
SLX4YLR135W YNR066CP53752 436 aa1.15□□□□□ -2.23
SLX4YLR135W SEC13Q04491 297 aaKnown RBP1.15□□□□□ -2.23
SLX4YLR135W GMC2Q06201 188 aa1.15□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms