RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP16	YKR086W	YGR210C	P42942	411 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	MRS2	Q01926	470 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	YOL029C	Q08187	201 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	CEX1	Q12453	761 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	RPL21B	Q12672	160 aa	Known RBP	0.81	□□□□□ -2.28
PRP16	YKR086W	SPO24	Q3E752	67 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	SRN2	Q99176	213 aa		0.81	□□□□□ -2.28
PRP16	YKR086W	CDC36	P06100	191 aa	Predicted RBP	0.8	□□□□□ -2.28
PRP16	YKR086W	RPS28B	P0C0X0	67 aa	Known RBP	0.8	□□□□□ -2.28
PRP16	YKR086W	ARF1	P11076	181 aa	Known RBP	0.8	□□□□□ -2.28
PRP16	YKR086W	PCL1	P24867	279 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	NTG1	P31378	399 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	HIR2	P32480	875 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	0.8	□□□□□ -2.28	not detected
PRP16	YKR086W	KTI12	P34253	313 aa	Known RBP	0.8	□□□□□ -2.28
PRP16	YKR086W	ECM4	P36156	370 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	ECM34	P38728	170 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	PEX18	P38855	283 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	PFS1	P38872	237 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	CCT2	P39076	527 aa	Known RBP	0.8	□□□□□ -2.28
PRP16	YKR086W	PRP39	P39682	629 aa	Known RBP	0.8	□□□□□ -2.28
PRP16	YKR086W	RMD6	P39975	231 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	GPI8	P49018	411 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	LSG1	P53145	640 aa	Known RBP	0.8	□□□□□ -2.28
PRP16	YKR086W	SHY1	P53266	389 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	CPD1	P53314	239 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	MTM1	P53320	366 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	ARE2	P53629	642 aa	Known RBP	0.8	□□□□□ -2.28
PRP16	YKR086W	HHT1	P61830	136 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	HAL1	Q01766	294 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	GRX5	Q02784	150 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	YDR541C	Q03049	344 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	MDM36	Q06820	579 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	NCA2	Q12374	616 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.8	□□□□□ -2.28
PRP16	YKR086W	SWI1	P09547	1314 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	RNR2	P09938	399 aa	Known RBP	0.8	□□□□□ -2.28
PRP16	YKR086W	TRX3	P25372	127 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	KRE6	P32486	720 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	VMA11	P32842	164 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	CYM1	P32898	989 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	RPS0A	P32905	252 aa	Known RBP	0.8	□□□□□ -2.28
PRP16	YKR086W	ARC19	P33204	171 aa	Known RBP	0.8	□□□□□ -2.28
PRP16	YKR086W	BMH2	P34730	273 aa	Known RBP	0.8	□□□□□ -2.28
PRP16	YKR086W	DAD2	P36162	133 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	ASC1	P38011	319 aa	Known RBP	0.8	□□□□□ -2.28
PRP16	YKR086W	ATG7	P38862	630 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	AVT2	P39981	480 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	AIM23	P47015	356 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	SDT1	P53078	280 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	CWC25	P53854	179 aa	Known RBP	0.8	□□□□□ -2.28
PRP16	YKR086W	HXT11	P54862	567 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	STD1	Q02794	444 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	ODC1	Q03028	310 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	MAK3	Q03503	176 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	CDD1	Q06549	142 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	YPR078C	Q06813	372 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	IRC25	Q07951	179 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	AAD15	Q08361	143 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	MSB2	P32334	1306 aa		0.8	□□□□□ -2.28
PRP16	YKR086W	CDC37	P06101	506 aa	Known RBP	0.79	□□□□□ -2.28
PRP16	YKR086W	BGL2	P15703	313 aa	Known RBP	0.79	□□□□□ -2.28
PRP16	YKR086W	STP22	P25604	385 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	CAM1	P29547	415 aa	Known RBP	0.79	□□□□□ -2.28
PRP16	YKR086W	MKK1	P32490	508 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	KAR9	P32526	644 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	YHK8	P38776	514 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	TIM17	P39515	158 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	KRE29	P40026	464 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	YMR144W	P40214	342 aa	Known RBP	0.79	□□□□□ -2.28
PRP16	YKR086W	STB1	P42845	420 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	GLG2	P47011	380 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	YGR250C	P53316	781 aa	Known RBP	0.79	□□□□□ -2.28
PRP16	YKR086W	YNL260C	P53846	198 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	PRP42	Q03776	544 aa	Known RBP	0.79	□□□□□ -2.28
PRP16	YKR086W	MRX8	Q05473	314 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	ASA1	Q06822	443 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	RAX2	Q12465	1220 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	YOL159C-A	Q3E769	90 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	OPI3	P05375	206 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	CYC3	P06182	269 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	NFT1	P0CE68	1218 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	RPL16A	P26784	199 aa	Known RBP	0.79	□□□□□ -2.28
PRP16	YKR086W	RPL16B	P26785	198 aa	Known RBP	0.79	□□□□□ -2.28
PRP16	YKR086W	CAT2	P32796	670 aa	Known RBP	0.79	□□□□□ -2.28
PRP16	YKR086W	HMT1	P38074	348 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	SLM4	P38247	162 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	SAS2	P40963	338 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	GCN20	P43535	752 aa	Known RBP	0.79	□□□□□ -2.28
PRP16	YKR086W	LOC1	P43586	204 aa	Predicted RBP	0.79	□□□□□ -2.28
PRP16	YKR086W	GCD14	P46959	383 aa	Predicted RBP	0.79	□□□□□ -2.28
PRP16	YKR086W	YGL118C	P53132	145 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	CAX4	P53223	239 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	RPL21A	Q02753	160 aa	Known RBP	0.79	□□□□□ -2.28
PRP16	YKR086W	IZH2	Q12442	317 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	PGA3	Q12746	312 aa	Known RBP	0.79	□□□□□ -2.28
PRP16	YKR086W	TAO3	P40468	2376 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	MRPL8	P22353	238 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	VPS3	P23643	1011 aa		0.79	□□□□□ -2.28
PRP16	YKR086W	RPL24B	P24000	155 aa	Known RBP	0.79	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 41.1 ms