RNA–Protein interactions for RNA: YKL211C

TRP3, Transcript of Indole-3-glycerol-phosphate synthase, yeast

Gene TRP3, Length 1,455 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP3	YKL211C	PXA2	P34230	853 aa		5.21	□□□□□ -1.58
TRP3	YKL211C	SRY1	P36007	326 aa		5.21	□□□□□ -1.58
TRP3	YKL211C	AIM3	P38266	947 aa	Known RBP	5.21	□□□□□ -1.58
TRP3	YKL211C	SHG1	P38337	142 aa		5.21	□□□□□ -1.58
TRP3	YKL211C	YHR122W	P38829	231 aa		5.21	□□□□□ -1.58
TRP3	YKL211C	ARO9	P38840	513 aa	Predicted RBP	5.21	□□□□□ -1.58
TRP3	YKL211C	CHL4	P38907	458 aa		5.21	□□□□□ -1.58
TRP3	YKL211C	ASP1	P38986	381 aa	Predicted RBP	5.21	□□□□□ -1.58
TRP3	YKL211C	LAS21	P40367	830 aa		5.21	□□□□□ -1.58
TRP3	YKL211C	MNT3	P40549	630 aa		5.21	□□□□□ -1.58
TRP3	YKL211C	RTS2	P40962	232 aa		5.21	□□□□□ -1.58
TRP3	YKL211C	NSE4	P43124	402 aa		5.21	□□□□□ -1.58
TRP3	YKL211C	DUG1	P43616	481 aa	Known RBP	5.21	□□□□□ -1.58
TRP3	YKL211C	IDS2	P46958	469 aa		5.21	□□□□□ -1.58
TRP3	YKL211C	SNO2	P53823	222 aa		5.21	□□□□□ -1.58
TRP3	YKL211C	OCA2	P53949	197 aa		5.21	□□□□□ -1.58
TRP3	YKL211C	YPL108W	Q02872	168 aa	Predicted RBP	5.21	□□□□□ -1.58
TRP3	YKL211C	TPP1	Q03796	238 aa		5.21	□□□□□ -1.58
TRP3	YKL211C	PLM2	Q04383	521 aa		5.21	□□□□□ -1.58
TRP3	YKL211C	SSL1	Q04673	461 aa	Predicted RBP	5.21	□□□□□ -1.58
TRP3	YKL211C	SPC3	Q12133	184 aa		5.21	□□□□□ -1.58
TRP3	YKL211C	RRP42	Q12277	265 aa	Predicted RBP	5.21	□□□□□ -1.58
TRP3	YKL211C	NDJ1	Q12366	352 aa		5.21	□□□□□ -1.58
TRP3	YKL211C	YCL001W-B	Q96VH2	84 aa		5.21	□□□□□ -1.58
TRP3	YKL211C	CAN1	P04817	590 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	PUT1	P09368	476 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	REV1	P12689	985 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	YCP4	P25349	247 aa	Known RBP	5.2	□□□□□ -1.58
TRP3	YKL211C	POF1	P25576	258 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	PRE4	P30657	266 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	MRP20	P32387	263 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	SUA5	P32579	426 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	TKL2	P33315	681 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	ECT1	P33412	323 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	TIP20	P33891	701 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	SSS1	P35179	80 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	ZTA1	P38230	334 aa	Known RBP	5.2	□□□□□ -1.58
TRP3	YKL211C	LNP1	P38878	278 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	ALK1	P43633	760 aa	Known RBP	5.2	□□□□□ -1.58
TRP3	YKL211C	TIS11	P47977	285 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	PBP1	P53297	722 aa	Known RBP	5.2	□□□□□ -1.58
TRP3	YKL211C	PAU12	P53343	120 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	YNR062C	P53748	327 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	GIM3	P53900	129 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	KIN4	Q01919	800 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	MRPS17	Q03246	237 aa	Predicted RBP	5.2	□□□□□ -1.58
TRP3	YKL211C	VBA4	Q04602	768 aa	Known RBP	5.2	□□□□□ -1.58
TRP3	YKL211C	ARG7	Q04728	441 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	NOC4	Q06512	552 aa	Predicted RBP	5.2	□□□□□ -1.58
TRP3	YKL211C	UPC2	Q12151	913 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	HMS1	Q12398	434 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	EAF3	Q12432	401 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	CSR2	Q12734	1121 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	YLR149C	Q99296	730 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	YPR096C	O13587	100 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	GAL80	P04387	435 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	CTT1	P06115	562 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	HAP2	P06774	265 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	TY1A-LR4	P0C2I8	440 aa	Known RBP	5.2	□□□□□ -1.58
TRP3	YKL211C	TY1A-DR6	P0CX70	440 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	TY1A-ER1	P0CX71	440 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	TY1A-LR2	P0CX72	440 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	TY1A-PL	P0CX73	440 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	TY1A-JR1	P0CX74	440 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	TY1A-LR3	P0CX75	440 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	TY1A-ML2	P0CX76	440 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	PDA1	P16387	420 aa	Known RBP	5.2	□□□□□ -1.58
TRP3	YKL211C	SEC59	P20048	519 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	DAL81	P21657	970 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	FUN26	P31381	517 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	SCM4	P32564	187 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	DOA4	P32571	926 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	SFK1	P35735	353 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	PAU24	P38155	120 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	ATG8	P38182	117 aa	RIP-Chip data	5.2	□□□□□ -1.58	not detected
TRP3	YKL211C	YBR071W	P38243	211 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	MTC4	P38335	694 aa	Known RBP	5.2	□□□□□ -1.58
TRP3	YKL211C	GND1	P38720	489 aa	Known RBP	5.2	□□□□□ -1.58
TRP3	YKL211C	YIL166C	P40445	542 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	NNF1	P47149	201 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	OCA1	P50946	238 aa	Predicted RBP	5.2	□□□□□ -1.58
TRP3	YKL211C	COS12	P53053	380 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	ELP6	Q04868	273 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	YMR321C	Q04898	105 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	MHR1	Q06630	226 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	PML1	Q07930	204 aa	Predicted RBP	5.2	□□□□□ -1.58
TRP3	YKL211C	PLB3	Q08108	686 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	SCP1	Q08873	200 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	TY1A-GR1	Q12085	440 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	TIR4	Q12218	487 aa	Predicted RBP	5.2	□□□□□ -1.58
TRP3	YKL211C	MHT1	Q12525	324 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	5.2	□□□□□ -1.58
TRP3	YKL211C	TY1A-OL	Q92392	440 aa	Known RBP	5.2	□□□□□ -1.58
TRP3	YKL211C	Q0142	Q9ZZW4	58 aa		5.2	□□□□□ -1.58
TRP3	YKL211C	MRPL8	P22353	238 aa		5.19	□□□□□ -1.58
TRP3	YKL211C	VMA16	P23968	213 aa		5.19	□□□□□ -1.58
TRP3	YKL211C	PBN1	P25580	416 aa		5.19	□□□□□ -1.58
TRP3	YKL211C	CDC50	P25656	391 aa		5.19	□□□□□ -1.58
TRP3	YKL211C	BUB3	P26449	341 aa		5.19	□□□□□ -1.58
TRP3	YKL211C	MSS51	P32335	436 aa		5.19	□□□□□ -1.58

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