RNA–Protein interactions for RNA: YJR042W

NUP85, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP85, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP85YJR042W ARP6Q12509 438 aa3.41□□□□□ -1.86
NUP85YJR042W PGK1P00560 416 aaKnown RBP3.4□□□□□ -1.86
NUP85YJR042W ASP3-2P0CX77 362 aa3.4□□□□□ -1.86
NUP85YJR042W ASP3-3P0CX78 362 aa3.4□□□□□ -1.86
NUP85YJR042W ASP3-4P0CX79 362 aa3.4□□□□□ -1.86
NUP85YJR042W ASP3-1P0CZ17 362 aa3.4□□□□□ -1.86
NUP85YJR042W HPR1P17629 752 aaKnown RBP3.4□□□□□ -1.86
NUP85YJR042W PUT3P25502 979 aaPredicted RBP3.4□□□□□ -1.86
NUP85YJR042W YCR102CP25608 368 aa3.4□□□□□ -1.86
NUP85YJR042W POP5P28005 173 aa3.4□□□□□ -1.86
NUP85YJR042W NDC1P32500 655 aa3.4□□□□□ -1.86
NUP85YJR042W BMT2P38278 337 aa3.4□□□□□ -1.86
NUP85YJR042W YMR262WP38430 313 aa3.4□□□□□ -1.86
NUP85YJR042W FMP52P40008 231 aa3.4□□□□□ -1.86
NUP85YJR042W SMB1P40018 196 aaKnown RBP3.4□□□□□ -1.86
NUP85YJR042W FIS1P40515 155 aa3.4□□□□□ -1.86
NUP85YJR042W SSN8P47821 323 aa3.4□□□□□ -1.86
NUP85YJR042W YIF1P53845 314 aaKnown RBP3.4□□□□□ -1.86
NUP85YJR042W YPL080CQ02826 108 aa3.4□□□□□ -1.86
NUP85YJR042W GIS1Q03833 894 aa3.4□□□□□ -1.86
NUP85YJR042W TMN2Q04562 672 aa3.4□□□□□ -1.86
NUP85YJR042W PBP4Q07362 185 aaKnown RBP3.4□□□□□ -1.86
NUP85YJR042W SHS1Q07657 551 aa3.4□□□□□ -1.86
NUP85YJR042W MCH4Q08268 501 aa3.4□□□□□ -1.86
NUP85YJR042W GPM2Q12008 311 aa3.4□□□□□ -1.86
NUP85YJR042W DET1Q99288 334 aaKnown RBP3.4□□□□□ -1.86
NUP85YJR042W HEM2P05373 342 aa3.4□□□□□ -1.87
NUP85YJR042W RPS3P05750 240 aaKnown RBP3.4□□□□□ -1.87
NUP85YJR042W YBR121C-AP0C5L4 52 aa3.4□□□□□ -1.87
NUP85YJR042W RBK1P25332 333 aa3.4□□□□□ -1.87
NUP85YJR042W SAC1P32368 623 aaKnown RBP3.4□□□□□ -1.87
NUP85YJR042W LST4P34239 828 aa3.4□□□□□ -1.87
NUP85YJR042W YBR062CP38239 180 aa3.4□□□□□ -1.87
NUP85YJR042W NDT80P38830 627 aa3.4□□□□□ -1.87
NUP85YJR042W SHO1P40073 367 aa3.4□□□□□ -1.87
NUP85YJR042W AGE2P40529 298 aa3.4□□□□□ -1.87
NUP85YJR042W YNL181WP53878 407 aa3.4□□□□□ -1.87
NUP85YJR042W YNL040WP53960 456 aaPredicted RBP3.4□□□□□ -1.87
NUP85YJR042W ARK1P53974 638 aa3.4□□□□□ -1.87
NUP85YJR042W PFA5Q03289 374 aa3.4□□□□□ -1.87
NUP85YJR042W RVB1Q03940 463 aaKnown RBP3.4□□□□□ -1.87
NUP85YJR042W SPC2Q04969 178 aa3.4□□□□□ -1.87
NUP85YJR042W ATG17Q06410 417 aa3.4□□□□□ -1.87
NUP85YJR042W CDA2Q06703 312 aa3.4□□□□□ -1.87
NUP85YJR042W GAT3Q07928 141 aa3.4□□□□□ -1.87
NUP85YJR042W SLF1Q12034 447 aaKnown RBP3.4□□□□□ -1.87
NUP85YJR042W FBA1P14540 359 aaKnown RBP3.39□□□□□ -1.87
NUP85YJR042W CBS2P14905 389 aa3.39□□□□□ -1.87
NUP85YJR042W SEC14P24280 304 aaKnown RBP3.39□□□□□ -1.87
NUP85YJR042W SSO1P32867 290 aa3.39□□□□□ -1.87
NUP85YJR042W PPZ2P33329 710 aa3.39□□□□□ -1.87
NUP85YJR042W AST1P35183 429 aa3.39□□□□□ -1.87
NUP85YJR042W YBR096WP38256 230 aa3.39□□□□□ -1.87
NUP85YJR042W APD1P38281 316 aa3.39□□□□□ -1.87
NUP85YJR042W FAU1P40099 211 aa3.39□□□□□ -1.87
NUP85YJR042W LAS21P40367 830 aa3.39□□□□□ -1.87
NUP85YJR042W MGA1P53050 456 aa3.39□□□□□ -1.87
NUP85YJR042W PXR1P53335 271 aaPredicted RBP3.39□□□□□ -1.87
NUP85YJR042W APM1Q00776 475 aaPredicted RBP3.39□□□□□ -1.87
NUP85YJR042W CTF19Q02732 369 aa3.39□□□□□ -1.87
NUP85YJR042W GCN5Q03330 439 aa3.39□□□□□ -1.87
NUP85YJR042W VPS74Q06385 345 aa3.39□□□□□ -1.87
NUP85YJR042W CSM4Q08955 156 aa3.39□□□□□ -1.87
NUP85YJR042W YLR122CQ12312 125 aa3.39□□□□□ -1.87
NUP85YJR042W ORT1Q12375 292 aa3.39□□□□□ -1.87
NUP85YJR042W LSO2Q3E772 92 aaKnown RBP3.39□□□□□ -1.87
NUP85YJR042W MRPS28P21771 286 aa3.39□□□□□ -1.87
NUP85YJR042W CMK2P22517 447 aa3.39□□□□□ -1.87
NUP85YJR042W YBR241CP38142 488 aa3.39□□□□□ -1.87
NUP85YJR042W YBR032WP38223 100 aa3.39□□□□□ -1.87
NUP85YJR042W PMT6P42934 759 aa3.39□□□□□ -1.87
NUP85YJR042W AZR1P50080 613 aa3.39□□□□□ -1.87
NUP85YJR042W GND2P53319 492 aa3.39□□□□□ -1.87
NUP85YJR042W YPL014WQ02606 381 aa3.39□□□□□ -1.87
NUP85YJR042W BER1Q06688 274 aaKnown RBP3.39□□□□□ -1.87
NUP85YJR042W WHI2P12611 486 aa3.38□□□□□ -1.87
NUP85YJR042W MKK1P32490 508 aa3.38□□□□□ -1.87
NUP85YJR042W MUD1P32605 298 aaKnown RBP3.38□□□□□ -1.87
NUP85YJR042W RIB5P38145 238 aa3.38□□□□□ -1.87
NUP85YJR042W FZO1P38297 855 aa3.38□□□□□ -1.87
NUP85YJR042W POP4P38336 279 aa3.38□□□□□ -1.87
NUP85YJR042W PRS2P38620 318 aaKnown RBP3.38□□□□□ -1.87
NUP85YJR042W IKI1P38874 309 aa3.38□□□□□ -1.87
NUP85YJR042W SHC1P39000 512 aa3.38□□□□□ -1.87
NUP85YJR042W SOP4P39543 234 aaPredicted RBP3.38□□□□□ -1.87
NUP85YJR042W COX16P47081 118 aa3.38□□□□□ -1.87
NUP85YJR042W PHB2P50085 310 aa3.38□□□□□ -1.87
NUP85YJR042W IMD3P50095 523 aaKnown RBP3.38□□□□□ -1.87
NUP85YJR042W VEL1P53058 206 aa3.38□□□□□ -1.87
NUP85YJR042W YGL117WP53133 265 aa3.38□□□□□ -1.87
NUP85YJR042W LST7P53237 242 aa3.38□□□□□ -1.87
NUP85YJR042W SSU72P53538 206 aaPredicted RBP3.38□□□□□ -1.87
NUP85YJR042W YVH1Q02256 364 aaKnown RBP3.38□□□□□ -1.87
NUP85YJR042W YMR166CQ03829 368 aa3.38□□□□□ -1.87
NUP85YJR042W YMR027WQ04371 470 aa3.38□□□□□ -1.87
NUP85YJR042W YDR278CQ05612 105 aa3.38□□□□□ -1.87
NUP85YJR042W NDE2Q07500 545 aa3.38□□□□□ -1.87
NUP85YJR042W LAA1P39526 2014 aa3.38□□□□□ -1.87
NUP85YJR042W PET494P07390 489 aaPredicted RBP3.38□□□□□ -1.87
NUP85YJR042W UBC8P28263 218 aa3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 239.3 ms