RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C ERG9P29704 444 aa3.04□□□□□ -1.92
YIR040CYIR040C DEG1P31115 442 aaKnown RBP3.04□□□□□ -1.92
YIR040CYIR040C SYN8P31377 255 aa3.04□□□□□ -1.92
YIR040CYIR040C LDB7P38210 180 aa3.04□□□□□ -1.92
YIR040CYIR040C YBR220CP38318 560 aa3.04□□□□□ -1.92
YIR040CYIR040C PRS3P38689 320 aaKnown RBP3.04□□□□□ -1.92
YIR040CYIR040C HAT2P39984 401 aa3.04□□□□□ -1.92
YIR040CYIR040C LSM4P40070 187 aaKnown RBP3.04□□□□□ -1.92
YIR040CYIR040C PGD1P40356 397 aa3.04□□□□□ -1.92
YIR040CYIR040C MAD2P40958 196 aa3.04□□□□□ -1.92
YIR040CYIR040C RPL10P41805 221 aaKnown RBP3.04□□□□□ -1.92
YIR040CYIR040C IME4P41833 600 aa3.04□□□□□ -1.92
YIR040CYIR040C NSE4P43124 402 aa3.04□□□□□ -1.92
YIR040CYIR040C BST1P43571 1029 aa3.04□□□□□ -1.92
YIR040CYIR040C TOS3P43637 560 aa3.04□□□□□ -1.92
YIR040CYIR040C SNG1P46950 547 aa3.04□□□□□ -1.92
YIR040CYIR040C ASG7P46993 209 aa3.04□□□□□ -1.92
YIR040CYIR040C DOC1P53068 250 aa3.04□□□□□ -1.92
YIR040CYIR040C GTR2P53290 341 aa3.04□□□□□ -1.92
YIR040CYIR040C NOP19P53317 196 aaPredicted RBP3.04□□□□□ -1.92
YIR040CYIR040C YLR460CP54007 376 aa3.04□□□□□ -1.92
YIR040CYIR040C NUP49Q02199 472 aa3.04□□□□□ -1.92
YIR040CYIR040C UBP16Q02863 499 aa3.04□□□□□ -1.92
YIR040CYIR040C DIG2Q03373 323 aaKnown RBP3.04□□□□□ -1.92
YIR040CYIR040C AIM34Q03673 198 aa3.04□□□□□ -1.92
YIR040CYIR040C YML096WQ04489 525 aa3.04□□□□□ -1.92
YIR040CYIR040C PAL1Q05518 499 aaKnown RBP3.04□□□□□ -1.92
YIR040CYIR040C ATG39Q06159 398 aa3.04□□□□□ -1.92
YIR040CYIR040C NKP2Q06162 153 aa3.04□□□□□ -1.92
YIR040CYIR040C IZH3Q07959 543 aa3.04□□□□□ -1.92
YIR040CYIR040C YOR365CQ08844 703 aa3.04□□□□□ -1.92
YIR040CYIR040C RKM5Q12367 367 aa3.04□□□□□ -1.92
YIR040CYIR040C RRI1Q12468 440 aa3.04□□□□□ -1.92
YIR040CYIR040C SCC2Q04002 1493 aa3.03□□□□□ -1.92
YIR040CYIR040C ROM2P51862 1356 aaKnown RBP3.03□□□□□ -1.92
YIR040CYIR040C SEC22P22214 214 aa3.03□□□□□ -1.92
YIR040CYIR040C VMA5P31412 392 aaKnown RBP3.03□□□□□ -1.92
YIR040CYIR040C DGR2P32330 852 aa3.03□□□□□ -1.92
YIR040CYIR040C RGT1P32862 1170 aa3.03□□□□□ -1.92
YIR040CYIR040C IMP3P32899 183 aaPredicted RBP3.03□□□□□ -1.92
YIR040CYIR040C ECT1P33412 323 aa3.03□□□□□ -1.92
YIR040CYIR040C PAD1P33751 242 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
YIR040CYIR040C SOL2P37262 315 aa3.03□□□□□ -1.92
YIR040CYIR040C YMC2P38087 329 aa3.03□□□□□ -1.92
YIR040CYIR040C PFF1P38244 976 aa3.03□□□□□ -1.92
YIR040CYIR040C ERV15P38312 142 aa3.03□□□□□ -1.92
YIR040CYIR040C RPF1P38805 295 aaKnown RBP3.03□□□□□ -1.92
YIR040CYIR040C YHR127WP38833 243 aaKnown RBP3.03□□□□□ -1.92
YIR040CYIR040C ATG7P38862 630 aa3.03□□□□□ -1.92
YIR040CYIR040C SSP120P39931 234 aaKnown RBP3.03□□□□□ -1.92
YIR040CYIR040C EAF5P39995 279 aa3.03□□□□□ -1.92
YIR040CYIR040C IST3P40565 148 aaPredicted RBP3.03□□□□□ -1.92
YIR040CYIR040C HXT9P40885 567 aa3.03□□□□□ -1.92
YIR040CYIR040C YJL118WP47022 219 aa3.03□□□□□ -1.92
YIR040CYIR040C IKS1P47042 667 aa3.03□□□□□ -1.92
YIR040CYIR040C AIM22P47051 409 aa3.03□□□□□ -1.92
YIR040CYIR040C ECM27P47144 725 aa3.03□□□□□ -1.92
YIR040CYIR040C RPS12P48589 143 aaKnown RBP3.03□□□□□ -1.92
YIR040CYIR040C GLO1P50107 326 aa3.03□□□□□ -1.92
YIR040CYIR040C PYK2P52489 506 aaKnown RBP3.03□□□□□ -1.92
YIR040CYIR040C YGL082WP53155 381 aa3.03□□□□□ -1.92
YIR040CYIR040C YGR026WP53217 278 aa3.03□□□□□ -1.92
YIR040CYIR040C IBD2P53892 351 aa3.03□□□□□ -1.92
YIR040CYIR040C INN1P53901 409 aa3.03□□□□□ -1.92
YIR040CYIR040C HXT11P54862 567 aa3.03□□□□□ -1.92
YIR040CYIR040C YAT1P80235 687 aa3.03□□□□□ -1.92
YIR040CYIR040C UBC7Q02159 165 aa3.03□□□□□ -1.92
YIR040CYIR040C EKI1Q03764 534 aa3.03□□□□□ -1.92
YIR040CYIR040C YET2Q04210 160 aa3.03□□□□□ -1.92
YIR040CYIR040C TRM12Q04235 462 aa3.03□□□□□ -1.92
YIR040CYIR040C AIM33Q04516 312 aa3.03□□□□□ -1.92
YIR040CYIR040C YTH1Q06102 208 aaPredicted RBP3.03□□□□□ -1.92
YIR040CYIR040C AAD15Q08361 143 aa3.03□□□□□ -1.92
YIR040CYIR040C NUS1Q12063 375 aa3.03□□□□□ -1.92
YIR040CYIR040C MDM32Q12171 622 aa3.03□□□□□ -1.92
YIR040CYIR040C RKI1Q12189 258 aa3.03□□□□□ -1.92
YIR040CYIR040C PKH2Q12236 1081 aaKnown RBP3.03□□□□□ -1.92
YIR040CYIR040C RUP1Q12242 671 aa3.03□□□□□ -1.92
YIR040CYIR040C YOR029WQ12243 111 aa3.03□□□□□ -1.92
YIR040CYIR040C DGK1Q12382 290 aa3.03□□□□□ -1.92
YIR040CYIR040C SFG1Q12507 346 aa3.03□□□□□ -1.92
YIR040CYIR040C GEA2P39993 1459 aaKnown RBP3.03□□□□□ -1.93
YIR040CYIR040C IQG1Q12280 1495 aa3.03□□□□□ -1.93
YIR040CYIR040C SAL1D6W196 494 aa3.02□□□□□ -1.93
YIR040CYIR040C URA3P03962 267 aa3.02□□□□□ -1.93
YIR040CYIR040C HIP1P06775 603 aa3.02□□□□□ -1.93
YIR040CYIR040C ATP1P07251 545 aaKnown RBP3.02□□□□□ -1.93
YIR040CYIR040C PHO2P07269 559 aa3.02□□□□□ -1.93
YIR040CYIR040C RPL31AP0C2H8 113 aaKnown RBP3.02□□□□□ -1.93
YIR040CYIR040C RPL31BP0C2H9 113 aaKnown RBP3.02□□□□□ -1.93
YIR040CYIR040C CDC26P14724 124 aa3.02□□□□□ -1.93
YIR040CYIR040C SPO7P18410 259 aa3.02□□□□□ -1.93
YIR040CYIR040C ATP10P18496 279 aa3.02□□□□□ -1.93
YIR040CYIR040C PHO13P19881 312 aa3.02□□□□□ -1.93
YIR040CYIR040C SAG1P20840 650 aa3.02□□□□□ -1.93
YIR040CYIR040C PDE1P22434 369 aa3.02□□□□□ -1.93
YIR040CYIR040C SPO11P23179 398 aa3.02□□□□□ -1.93
YIR040CYIR040C PUT3P25502 979 aaPredicted RBP3.02□□□□□ -1.93
YIR040CYIR040C AHC2P25649 128 aa3.02□□□□□ -1.93
YIR040CYIR040C GSY2P27472 705 aa3.02□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms