RNA–Protein interactions for RNA: YIL104C

SHQ1, Transcript of Chaperone protein, yeast

Gene SHQ1, Length 1,524 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHQ1	YIL104C	YNR062C	P53748	327 aa		3	□□□□□ -1.93
SHQ1	YIL104C	SMP3	Q04174	516 aa		3	□□□□□ -1.93
SHQ1	YIL104C	URC2	Q04411	772 aa		3	□□□□□ -1.93
SHQ1	YIL104C	ERB1	Q04660	807 aa	Known RBP	3	□□□□□ -1.93
SHQ1	YIL104C	YMR226C	Q05016	267 aa	Known RBP	3	□□□□□ -1.93
SHQ1	YIL104C	YLR446W	Q06204	433 aa		3	□□□□□ -1.93
SHQ1	YIL104C	GRE1	Q08969	168 aa		3	□□□□□ -1.93
SHQ1	YIL104C	RPL7B	Q12213	244 aa	Known RBP	3	□□□□□ -1.93
SHQ1	YIL104C	YOS9	Q99220	542 aa		3	□□□□□ -1.93
SHQ1	YIL104C	DBP3	P20447	523 aa	Known RBP	2.99	□□□□□ -1.93
SHQ1	YIL104C	PRE9	P23638	258 aa	Known RBP	2.99	□□□□□ -1.93
SHQ1	YIL104C	CLB4	P24871	460 aa		2.99	□□□□□ -1.93
SHQ1	YIL104C	YCL002C	P25565	263 aa		2.99	□□□□□ -1.93
SHQ1	YIL104C	ATG15	P25641	520 aa		2.99	□□□□□ -1.93
SHQ1	YIL104C	EHD3	P28817	500 aa		2.99	□□□□□ -1.93
SHQ1	YIL104C	YEF1	P32622	495 aa		2.99	□□□□□ -1.93
SHQ1	YIL104C	TEF4	P36008	412 aa	Known RBP	2.99	□□□□□ -1.93
SHQ1	YIL104C	SOK1	P40317	901 aa		2.99	□□□□□ -1.93
SHQ1	YIL104C	RFC4	P40339	323 aa	Known RBP	2.99	□□□□□ -1.93
SHQ1	YIL104C	NAS2	P40555	220 aa		2.99	□□□□□ -1.93
SHQ1	YIL104C	STB1	P42845	420 aa		2.99	□□□□□ -1.93
SHQ1	YIL104C	GCN20	P43535	752 aa	Known RBP	2.99	□□□□□ -1.93
SHQ1	YIL104C	IRC7	P43623	340 aa		2.99	□□□□□ -1.93
SHQ1	YIL104C	BPL1	P48445	690 aa	Predicted RBP	2.99	□□□□□ -1.93
SHQ1	YIL104C	HSV2	P50079	448 aa	Predicted RBP	2.99	□□□□□ -1.93
SHQ1	YIL104C	MPP6	P53725	186 aa	Predicted RBP	2.99	□□□□□ -1.93
SHQ1	YIL104C	YKR011C	Q02209	353 aa		2.99	□□□□□ -1.93
SHQ1	YIL104C	SDC1	Q03323	175 aa		2.99	□□□□□ -1.93
SHQ1	YIL104C	SCS7	Q03529	384 aa		2.99	□□□□□ -1.93
SHQ1	YIL104C	OST6	Q03723	332 aa		2.99	□□□□□ -1.93
SHQ1	YIL104C	MIX14	Q04341	121 aa		2.99	□□□□□ -1.93
SHQ1	YIL104C	API2	Q04413	109 aa		2.99	□□□□□ -1.93
SHQ1	YIL104C	SEC13	Q04491	297 aa	Known RBP	2.99	□□□□□ -1.93
SHQ1	YIL104C	COX20	Q04935	205 aa		2.99	□□□□□ -1.93
SHQ1	YIL104C	YLR345W	Q06137	509 aa		2.99	□□□□□ -1.93
SHQ1	YIL104C	YPR127W	Q06494	345 aa		2.99	□□□□□ -1.93
SHQ1	YIL104C	NDL1	Q06568	189 aa		2.99	□□□□□ -1.93
SHQ1	YIL104C	SYO1	Q07395	620 aa		2.99	□□□□□ -1.93
SHQ1	YIL104C	YDL218W	Q07629	317 aa		2.99	□□□□□ -1.93
SHQ1	YIL104C	HRT1	Q08273	121 aa		2.99	□□□□□ -1.93
SHQ1	YIL104C	ENB1	Q08299	606 aa		2.99	□□□□□ -1.93
SHQ1	YIL104C	YPL272C	Q08984	517 aa		2.99	□□□□□ -1.93
SHQ1	YIL104C	YDL109C	Q12103	647 aa		2.99	□□□□□ -1.93
SHQ1	YIL104C	PRS5	Q12265	496 aa	Known RBP	2.99	□□□□□ -1.93
SHQ1	YIL104C	TAF3	Q12297	353 aa		2.99	□□□□□ -1.93
SHQ1	YIL104C	SET6	Q12529	373 aa		2.99	□□□□□ -1.93
SHQ1	YIL104C	DPM1	P14020	267 aa	Known RBP	2.98	□□□□□ -1.93
SHQ1	YIL104C	PCL1	P24867	279 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	RAD51	P25454	400 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	CWH43	P25618	953 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	PRE2	P30656	287 aa	Known RBP	2.98	□□□□□ -1.93
SHQ1	YIL104C	NUF2	P33895	451 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	TPO5	P36029	618 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	YBR063C	P38083	404 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	SIC1	P38634	284 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	SBE22	P38814	852 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	YHR180W	P38868	163 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	PTH1	P38876	190 aa	Known RBP	2.98	□□□□□ -1.93
SHQ1	YIL104C	RIX1	P38883	763 aa	Predicted RBP	2.98	□□□□□ -1.93
SHQ1	YIL104C	YJL193W	P39542	402 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	SOP4	P39543	234 aa	Predicted RBP	2.98	□□□□□ -1.93
SHQ1	YIL104C	YER010C	P40011	234 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	QRI1	P43123	477 aa	Known RBP	2.98	□□□□□ -1.93
SHQ1	YIL104C	FAR7	P43592	221 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	ILM1	P47155	203 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	MSY1	P48527	492 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	TOM22	P49334	152 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	RPN14	P53196	417 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	YGR126W	P53274	230 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	RRN9	P53437	365 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	COS1	P53822	381 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	YNL092W	P53934	400 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	MRPL1	Q04599	285 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	ELP6	Q04868	273 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	BUR2	Q05949	395 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	GAS2	Q06135	555 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	NTG2	Q08214	380 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	RDL2	Q08742	149 aa	Known RBP	2.98	□□□□□ -1.93
SHQ1	YIL104C	YOR289W	Q12012	251 aa	Predicted RBP	2.98	□□□□□ -1.93
SHQ1	YIL104C	VIK1	Q12045	647 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	SIA1	Q12212	622 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	YOR214C	Q12282	236 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	YGR161W-C	Q3E744	92 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	Q0144	Q9ZZW2	109 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	OPI3	P05375	206 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	RPL43A	P0CX25	92 aa	Known RBP	2.98	□□□□□ -1.93
SHQ1	YIL104C	RPL43B	P0CX26	92 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	YHR214C-D	P0CX93	97 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	FBA1	P14540	359 aa	Known RBP	2.98	□□□□□ -1.93
SHQ1	YIL104C	SNF6	P18888	332 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	ERG9	P29704	444 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	THI4	P32318	326 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	OAC1	P32332	324 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	KRE6	P32486	720 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	2.98	□□□□□ -1.93	not detected
SHQ1	YIL104C	EXO84	P38261	753 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	ZRG8	P40021	1076 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	SHO1	P40073	367 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	RRG9	P40156	214 aa		2.98	□□□□□ -1.93
SHQ1	YIL104C	YIL166C	P40445	542 aa		2.98	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms