RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W UTR1P21373 530 aa2.51□□□□□ -2.01
SEC28YIL076W RCK1P38622 512 aa2.51□□□□□ -2.01
SEC28YIL076W TPC1P53257 314 aa2.51□□□□□ -2.01
SEC28YIL076W GTO3Q04806 366 aa2.51□□□□□ -2.01
SEC28YIL076W YDR222WQ04925 415 aa2.51□□□□□ -2.01
SEC28YIL076W GLE1Q12315 538 aa2.51□□□□□ -2.01
SEC28YIL076W SFG1Q12507 346 aa2.51□□□□□ -2.01
SEC28YIL076W IRC20Q06554 1556 aa2.51□□□□□ -2.01
SEC28YIL076W NUP159P40477 1460 aa2.51□□□□□ -2.01
SEC28YIL076W TRM732Q03496 1420 aa2.51□□□□□ -2.01
SEC28YIL076W SMC4Q12267 1418 aa2.51□□□□□ -2.01
SEC28YIL076W MHP1P43638 1398 aa2.5□□□□□ -2.01
SEC28YIL076W DAP2P18962 818 aa2.5□□□□□ -2.01
SEC28YIL076W UBA1P22515 1024 aaKnown RBP2.5□□□□□ -2.01
SEC28YIL076W RFT1P38206 574 aaPredicted RBP2.5□□□□□ -2.01
SEC28YIL076W CAX4P53223 239 aa2.5□□□□□ -2.01
SEC28YIL076W FMP48P53233 369 aa2.5□□□□□ -2.01
SEC28YIL076W UTP6Q02354 440 aaKnown RBP2.5□□□□□ -2.01
SEC28YIL076W YMR310CQ04867 317 aaPredicted RBP2.5□□□□□ -2.01
SEC28YIL076W SPP41P38904 1435 aa2.5□□□□□ -2.01
SEC28YIL076W DRS2P39524 1355 aa2.49□□□□□ -2.01
SEC28YIL076W RAD1P06777 1100 aa2.49□□□□□ -2.01
SEC28YIL076W CTA1P15202 515 aa2.49□□□□□ -2.01
SEC28YIL076W THR4P16120 514 aaKnown RBP2.49□□□□□ -2.01
SEC28YIL076W HPR1P17629 752 aaKnown RBP2.49□□□□□ -2.01
SEC28YIL076W PUP2P32379 260 aa2.49□□□□□ -2.01
SEC28YIL076W GDT1P38301 280 aaPredicted RBP2.49□□□□□ -2.01
SEC28YIL076W YIL054WP40524 105 aa2.49□□□□□ -2.01
SEC28YIL076W YHC3P47040 408 aa2.49□□□□□ -2.01
SEC28YIL076W VPS15P22219 1454 aa2.49□□□□□ -2.01
SEC28YIL076W YOR1P53049 1477 aa2.49□□□□□ -2.01
SEC28YIL076W TSC11P40061 1430 aa2.49□□□□□ -2.01
SEC28YIL076W SNT2P53127 1403 aa2.49□□□□□ -2.01
SEC28YIL076W DAL81P21657 970 aa2.48□□□□□ -2.01
SEC28YIL076W MIG1P27705 504 aa2.48□□□□□ -2.01
SEC28YIL076W ERG9P29704 444 aa2.48□□□□□ -2.01
SEC28YIL076W ITR2P30606 609 aa2.48□□□□□ -2.01
SEC28YIL076W HMX1P32339 317 aa2.48□□□□□ -2.01
SEC28YIL076W SCC4P40090 624 aa2.48□□□□□ -2.01
SEC28YIL076W MIC19P43594 170 aa2.48□□□□□ -2.01
SEC28YIL076W SHE4P51534 789 aa2.48□□□□□ -2.01
SEC28YIL076W YGL088WP53151 121 aa2.48□□□□□ -2.01
SEC28YIL076W SPH1Q06160 661 aa2.48□□□□□ -2.01
SEC28YIL076W ARR1Q06596 294 aa2.48□□□□□ -2.01
SEC28YIL076W RPO21P04050 1733 aaKnown RBP2.48□□□□□ -2.01
SEC28YIL076W STU1P38198 1513 aa2.47□□□□□ -2.01
SEC28YIL076W DNF2Q12675 1612 aa2.47□□□□□ -2.01
SEC28YIL076W INO2P26798 304 aa2.47□□□□□ -2.01
SEC28YIL076W SMC2P38989 1170 aaKnown RBP2.47□□□□□ -2.01
SEC28YIL076W YGL118CP53132 145 aa2.47□□□□□ -2.01
SEC28YIL076W YPL113CQ02961 396 aa2.47□□□□□ -2.01
SEC28YIL076W CSI1Q04368 295 aa2.47□□□□□ -2.01
SEC28YIL076W YPL264CQ08980 353 aa2.47□□□□□ -2.01
SEC28YIL076W YPR063CQ12160 140 aa2.47□□□□□ -2.01
SEC28YIL076W VTH1P40438 1549 aa2.47□□□□□ -2.01
SEC28YIL076W VTH2P40890 1549 aa2.47□□□□□ -2.01
SEC28YIL076W NTE1Q04958 1679 aa2.47□□□□□ -2.01
SEC28YIL076W MRPL20P22354 195 aaPredicted RBP2.46□□□□□ -2.02
SEC28YIL076W IML3P38265 245 aa2.46□□□□□ -2.02
SEC28YIL076W MIX17Q03667 156 aa2.46□□□□□ -2.02
SEC28YIL076W MYO4P32492 1471 aa2.45□□□□□ -2.02
SEC28YIL076W YKL187CP34231 750 aa2.45□□□□□ -2.02
SEC28YIL076W YHR122WP38829 231 aa2.45□□□□□ -2.02
SEC28YIL076W DSE1P40077 573 aa2.45□□□□□ -2.02
SEC28YIL076W JEM1P40358 645 aa2.45□□□□□ -2.02
SEC28YIL076W SLM1P40485 686 aa2.45□□□□□ -2.02
SEC28YIL076W HSH155P49955 971 aaKnown RBP2.45□□□□□ -2.02
SEC28YIL076W SGT2Q12118 346 aaKnown RBP2.45□□□□□ -2.02
SEC28YIL076W SNQ2P32568 1501 aaKnown RBP2.44□□□□□ -2.02
SEC28YIL076W PDR12Q02785 1511 aa2.44□□□□□ -2.02
SEC28YIL076W RDS1P25611 832 aa2.44□□□□□ -2.02
SEC28YIL076W ADH5P38113 351 aaKnown RBP2.44□□□□□ -2.02
SEC28YIL076W MMS21P38632 267 aa2.44□□□□□ -2.02
SEC28YIL076W BUD13P46947 266 aaPredicted RBP2.44□□□□□ -2.02
SEC28YIL076W SDS23P53172 527 aa2.44□□□□□ -2.02
SEC28YIL076W DXO1Q06349 442 aa2.44□□□□□ -2.02
SEC28YIL076W RLP24Q07915 199 aaKnown RBP2.44□□□□□ -2.02
SEC28YIL076W MIM1Q08176 113 aa2.44□□□□□ -2.02
SEC28YIL076W NUP170P38181 1502 aa2.43□□□□□ -2.02
SEC28YIL076W MET2P08465 486 aa2.43□□□□□ -2.02
SEC28YIL076W PHO84P25297 587 aaKnown RBP2.43□□□□□ -2.02
SEC28YIL076W CIN8P27895 1000 aa2.43□□□□□ -2.02
SEC28YIL076W KTI12P34253 313 aaKnown RBP2.43□□□□□ -2.02
SEC28YIL076W PEX32P38292 413 aa2.43□□□□□ -2.02
SEC28YIL076W MED8P38304 223 aa2.43□□□□□ -2.02
SEC28YIL076W SMF2P38778 549 aa2.43□□□□□ -2.02
SEC28YIL076W PMT4P46971 762 aa2.43□□□□□ -2.02
SEC28YIL076W HCH1P53834 153 aa2.43□□□□□ -2.02
SEC28YIL076W YDR114CQ04597 100 aa2.43□□□□□ -2.02
SEC28YIL076W SPO14P36126 1683 aa2.43□□□□□ -2.02
SEC28YIL076W REP1P03871 373 aa2.42□□□□□ -2.02
SEC28YIL076W ARO4P32449 370 aaKnown RBP2.42□□□□□ -2.02
SEC28YIL076W ASP1P38986 381 aaPredicted RBP2.42□□□□□ -2.02
SEC28YIL076W YMR134WP40207 237 aa2.42□□□□□ -2.02
SEC28YIL076W RPA34P47006 233 aaPredicted RBP2.42□□□□□ -2.02
SEC28YIL076W CLP1Q08685 445 aaPredicted RBP2.42□□□□□ -2.02
SEC28YIL076W TRM10Q12400 293 aa2.42□□□□□ -2.02
SEC28YIL076W TFC7Q12415 435 aa2.42□□□□□ -2.02
SEC28YIL076W ERP4Q12450 207 aa2.42□□□□□ -2.02
SEC28YIL076W STH1P32597 1359 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 54.9 ms