RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W AIM45Q12480 344 aaKnown RBP2.08□□□□□ -2.08
SSF1YHR066W YOL085CQ99345 113 aa2.08□□□□□ -2.08
SSF1YHR066W HAP1P0CE41 1502 aa2.07□□□□□ -2.08
SSF1YHR066W RNR2P09938 399 aaKnown RBP2.07□□□□□ -2.08
SSF1YHR066W MIR1P23641 311 aaKnown RBP2.07□□□□□ -2.08
SSF1YHR066W EFB1P32471 206 aaKnown RBP2.07□□□□□ -2.08
SSF1YHR066W YUH1P35127 236 aa2.07□□□□□ -2.08
SSF1YHR066W DTR1P38125 572 aa2.07□□□□□ -2.08
SSF1YHR066W YBR241CP38142 488 aa2.07□□□□□ -2.08
SSF1YHR066W YBL028CP38202 106 aa2.07□□□□□ -2.08
SSF1YHR066W YHR122WP38829 231 aa2.07□□□□□ -2.08
SSF1YHR066W END3P39013 349 aa2.07□□□□□ -2.08
SSF1YHR066W FHL1P39521 936 aa2.07□□□□□ -2.08
SSF1YHR066W GCD14P46959 383 aaPredicted RBP2.07□□□□□ -2.08
SSF1YHR066W YJR054WP47114 497 aa2.07□□□□□ -2.08
SSF1YHR066W NUP84P52891 726 aa2.07□□□□□ -2.08
SSF1YHR066W PNC1P53184 216 aaKnown RBP2.07□□□□□ -2.08
SSF1YHR066W RMI1Q02685 241 aa2.07□□□□□ -2.08
SSF1YHR066W YMR310CQ04867 317 aaPredicted RBP2.07□□□□□ -2.08
SSF1YHR066W YLR297WQ05899 129 aa2.07□□□□□ -2.08
SSF1YHR066W RRT8Q08219 342 aa2.07□□□□□ -2.08
SSF1YHR066W SRO7Q12038 1033 aa2.07□□□□□ -2.08
SSF1YHR066W MRPL23Q12487 163 aaPredicted RBP2.07□□□□□ -2.08
SSF1YHR066W FSH3Q99369 266 aa2.07□□□□□ -2.08
SSF1YHR066W ASP3-2P0CX77 362 aa2.06□□□□□ -2.08
SSF1YHR066W ASP3-3P0CX78 362 aa2.06□□□□□ -2.08
SSF1YHR066W ASP3-4P0CX79 362 aa2.06□□□□□ -2.08
SSF1YHR066W ASP3-1P0CZ17 362 aa2.06□□□□□ -2.08
SSF1YHR066W MAS1P10507 462 aa2.06□□□□□ -2.08
SSF1YHR066W HXT2P23585 541 aa2.06□□□□□ -2.08
SSF1YHR066W HMX1P32339 317 aa2.06□□□□□ -2.08
SSF1YHR066W RPT5P33297 434 aaKnown RBP2.06□□□□□ -2.08
SSF1YHR066W YKR015CP36111 568 aa2.06□□□□□ -2.08
SSF1YHR066W ATG7P38862 630 aa2.06□□□□□ -2.08
SSF1YHR066W SPT8P38915 602 aa2.06□□□□□ -2.08
SSF1YHR066W ALP1P38971 573 aa2.06□□□□□ -2.08
SSF1YHR066W YER184CP39961 794 aa2.06□□□□□ -2.08
SSF1YHR066W SNL1P40548 159 aa2.06□□□□□ -2.08
SSF1YHR066W AGX1P43567 385 aa2.06□□□□□ -2.08
SSF1YHR066W AIM23P47015 356 aa2.06□□□□□ -2.08
SSF1YHR066W YJR030CP47101 745 aa2.06□□□□□ -2.08
SSF1YHR066W RIB4P50861 169 aaPredicted RBP2.06□□□□□ -2.08
SSF1YHR066W VEL1P53058 206 aa2.06□□□□□ -2.08
SSF1YHR066W YGL114WP53134 725 aa2.06□□□□□ -2.08
SSF1YHR066W RNH201P53942 307 aa2.06□□□□□ -2.08
SSF1YHR066W SPO19Q03029 223 aa2.06□□□□□ -2.08
SSF1YHR066W CAB5Q03941 241 aa2.06□□□□□ -2.08
SSF1YHR066W YOL075CQ08234 1294 aa2.06□□□□□ -2.08
SSF1YHR066W FRE8Q12209 686 aa2.06□□□□□ -2.08
SSF1YHR066W VMR1P38735 1592 aa2.06□□□□□ -2.08
SSF1YHR066W MSS116P15424 664 aaKnown RBP2.05□□□□□ -2.08
SSF1YHR066W UGA1P17649 471 aa2.05□□□□□ -2.08
SSF1YHR066W YKL070WP36087 169 aa2.05□□□□□ -2.08
SSF1YHR066W SHE3P38272 425 aaKnown RBP2.05□□□□□ -2.08
SSF1YHR066W SWC5P38326 303 aa2.05□□□□□ -2.08
SSF1YHR066W HSM3P38348 480 aa2.05□□□□□ -2.08
SSF1YHR066W RCK2P38623 610 aa2.05□□□□□ -2.08
SSF1YHR066W YAP3P38749 330 aa2.05□□□□□ -2.08
SSF1YHR066W YPT35P38815 214 aaKnown RBP2.05□□□□□ -2.08
SSF1YHR066W YHR182WP38870 785 aa2.05□□□□□ -2.08
SSF1YHR066W YHC3P47040 408 aa2.05□□□□□ -2.08
SSF1YHR066W IML1P47170 1584 aa2.05□□□□□ -2.08
SSF1YHR066W LST7P53237 242 aa2.05□□□□□ -2.08
SSF1YHR066W YGR067CP53243 804 aa2.05□□□□□ -2.08
SSF1YHR066W DBP6P53734 629 aaKnown RBP2.05□□□□□ -2.08
SSF1YHR066W YNL146WP53906 100 aa2.05□□□□□ -2.08
SSF1YHR066W SLT2Q00772 484 aa2.05□□□□□ -2.08
SSF1YHR066W MRX11Q03079 207 aa2.05□□□□□ -2.08
SSF1YHR066W TLG1Q03322 224 aa2.05□□□□□ -2.08
SSF1YHR066W SCS7Q03529 384 aa2.05□□□□□ -2.08
SSF1YHR066W TRM82Q03774 444 aa2.05□□□□□ -2.08
SSF1YHR066W SMP3Q04174 516 aa2.05□□□□□ -2.08
SSF1YHR066W ERV41Q04651 352 aa2.05□□□□□ -2.08
SSF1YHR066W RRG8Q06109 277 aa2.05□□□□□ -2.08
SSF1YHR066W GAS2Q06135 555 aa2.05□□□□□ -2.08
SSF1YHR066W VAC14Q06708 880 aa2.05□□□□□ -2.08
SSF1YHR066W SGT2Q12118 346 aaKnown RBP2.05□□□□□ -2.08
SSF1YHR066W LDB17Q12342 491 aa2.05□□□□□ -2.08
SSF1YHR066W STE2D6VTK4 431 aa2.04□□□□□ -2.08
SSF1YHR066W TDH1P00360 332 aaKnown RBP2.04□□□□□ -2.08
SSF1YHR066W CKI1P20485 582 aa2.04□□□□□ -2.08
SSF1YHR066W MEK1P24719 497 aaPredicted RBP2.04□□□□□ -2.08
SSF1YHR066W YPS1P32329 569 aa2.04□□□□□ -2.08
SSF1YHR066W COY1P34237 679 aa2.04□□□□□ -2.08
SSF1YHR066W COS9P36034 407 aa2.04□□□□□ -2.08
SSF1YHR066W PEX18P38855 283 aa2.04□□□□□ -2.08
SSF1YHR066W BFR1P38934 470 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
SSF1YHR066W PRP39P39682 629 aaKnown RBP2.04□□□□□ -2.08
SSF1YHR066W CDC40P40968 455 aaPredicted RBP2.04□□□□□ -2.08
SSF1YHR066W STB1P42845 420 aa2.04□□□□□ -2.08
SSF1YHR066W GTO1P48239 356 aa2.04□□□□□ -2.08
SSF1YHR066W YGL185CP53100 379 aa2.04□□□□□ -2.08
SSF1YHR066W MND1P53102 219 aa2.04□□□□□ -2.08
SSF1YHR066W SUR7P54003 302 aa2.04□□□□□ -2.08
SSF1YHR066W ARR1Q06596 294 aa2.04□□□□□ -2.08
SSF1YHR066W YDR262WQ12331 272 aa2.04□□□□□ -2.08
SSF1YHR066W PAA1Q12447 191 aaKnown RBP2.04□□□□□ -2.08
SSF1YHR066W DCP1Q12517 231 aaPredicted RBP2.04□□□□□ -2.08
SSF1YHR066W SPO24Q3E752 67 aa2.04□□□□□ -2.08
SSF1YHR066W UBA3Q99344 299 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 118.9 ms