RNA–Protein interactions for RNA: YGR239C

PEX21, Transcript of Peroxin required for peroxisomal matrix protein targeting, yeastyeast

Gene PEX21, Length 867 nt, Biotype protein coding, Subcellular localisation Peroxisome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX21YGR239C LDB17Q12342 491 aa3.43□□□□□ -1.86
PEX21YGR239C TDH1P00360 332 aaKnown RBP3.42□□□□□ -1.86
PEX21YGR239C ILV1P00927 576 aaKnown RBP3.42□□□□□ -1.86
PEX21YGR239C RPL24AP04449 155 aaKnown RBP3.42□□□□□ -1.86
PEX21YGR239C BGL2P15703 313 aaKnown RBP3.42□□□□□ -1.86
PEX21YGR239C YEL045CP32616 141 aa3.42□□□□□ -1.86
PEX21YGR239C PMT4P46971 762 aa3.42□□□□□ -1.86
PEX21YGR239C YJR054WP47114 497 aa3.42□□□□□ -1.86
PEX21YGR239C SWC4P53201 476 aa3.42□□□□□ -1.86
PEX21YGR239C YGR015CP53208 328 aa3.42□□□□□ -1.86
PEX21YGR239C ATC1Q04005 294 aa3.42□□□□□ -1.86
PEX21YGR239C MRX9Q07349 420 aaKnown RBP3.42□□□□□ -1.86
PEX21YGR239C YLR012CQ07927 99 aa3.42□□□□□ -1.86
PEX21YGR239C MMT2Q08970 484 aa3.42□□□□□ -1.86
PEX21YGR239C RPL31AP0C2H8 113 aaKnown RBP3.41□□□□□ -1.86
PEX21YGR239C ASP3-2P0CX77 362 aa3.41□□□□□ -1.86
PEX21YGR239C ASP3-3P0CX78 362 aa3.41□□□□□ -1.86
PEX21YGR239C ASP3-4P0CX79 362 aa3.41□□□□□ -1.86
PEX21YGR239C ASP3-1P0CZ17 362 aa3.41□□□□□ -1.86
PEX21YGR239C ISY1P21374 235 aaPredicted RBP3.41□□□□□ -1.86
PEX21YGR239C MRPL20P22354 195 aaPredicted RBP3.41□□□□□ -1.86
PEX21YGR239C PDC2P32896 925 aa3.41□□□□□ -1.86
PEX21YGR239C SKG6P32900 734 aaPredicted RBP3.41□□□□□ -1.86
PEX21YGR239C YKL063CP35725 167 aa3.41□□□□□ -1.86
PEX21YGR239C YPC1P38298 316 aa3.41□□□□□ -1.86
PEX21YGR239C OM14P38325 134 aa3.41□□□□□ -1.86
PEX21YGR239C FMP33P46998 180 aa3.41□□□□□ -1.86
PEX21YGR239C SDT1P53078 280 aa3.41□□□□□ -1.86
PEX21YGR239C MRX11Q03079 207 aa3.41□□□□□ -1.86
PEX21YGR239C GPN3Q06543 272 aa3.41□□□□□ -1.86
PEX21YGR239C TMC1Q08422 150 aaPredicted RBP3.41□□□□□ -1.86
PEX21YGR239C FRS2P15625 503 aaKnown RBP3.4□□□□□ -1.87
PEX21YGR239C PET8P38921 284 aa3.4□□□□□ -1.87
PEX21YGR239C SMC2P38989 1170 aaKnown RBP3.4□□□□□ -1.87
PEX21YGR239C SCC4P40090 624 aa3.4□□□□□ -1.87
PEX21YGR239C YJL118WP47022 219 aa3.4□□□□□ -1.87
PEX21YGR239C SCW10Q04951 389 aa3.4□□□□□ -1.87
PEX21YGR239C DTD1Q07648 150 aaKnown RBP3.4□□□□□ -1.87
PEX21YGR239C BTS1Q12051 335 aa3.4□□□□□ -1.87
PEX21YGR239C COX4P04037 155 aa3.39□□□□□ -1.87
PEX21YGR239C CBF5P33322 483 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
PEX21YGR239C RPC37P36121 282 aa3.39□□□□□ -1.87
PEX21YGR239C GPI18P38211 433 aa3.39□□□□□ -1.87
PEX21YGR239C CHL4P38907 458 aa3.39□□□□□ -1.87
PEX21YGR239C SOP4P39543 234 aaPredicted RBP3.39□□□□□ -1.87
PEX21YGR239C VEL1P53058 206 aa3.39□□□□□ -1.87
PEX21YGR239C RPL21AQ02753 160 aaKnown RBP3.39□□□□□ -1.87
PEX21YGR239C YPL077CQ02831 240 aa3.39□□□□□ -1.87
PEX21YGR239C SCS7Q03529 384 aa3.39□□□□□ -1.87
PEX21YGR239C COX20Q04935 205 aa3.39□□□□□ -1.87
PEX21YGR239C YPR064WQ12492 139 aa3.39□□□□□ -1.87
PEX21YGR239C PRM4Q12498 284 aa3.39□□□□□ -1.87
PEX21YGR239C TDH3P00359 332 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
PEX21YGR239C RSR1P13856 272 aa3.38□□□□□ -1.87
PEX21YGR239C PCL1P24867 279 aa3.38□□□□□ -1.87
PEX21YGR239C GCG1P32656 232 aaKnown RBP3.38□□□□□ -1.87
PEX21YGR239C TPC1P53257 314 aa3.38□□□□□ -1.87
PEX21YGR239C CPD1P53314 239 aa3.38□□□□□ -1.87
PEX21YGR239C GMC1Q04399 608 aa3.38□□□□□ -1.87
PEX21YGR239C FOL3Q12676 427 aaPredicted RBP3.38□□□□□ -1.87
PEX21YGR239C ATP6P00854 259 aa3.37□□□□□ -1.87
PEX21YGR239C IMP3P32899 183 aaPredicted RBP3.37□□□□□ -1.87
PEX21YGR239C MCH2P36032 473 aa3.37□□□□□ -1.87
PEX21YGR239C SHE1P38200 338 aa3.37□□□□□ -1.87
PEX21YGR239C GDS1P41913 522 aa3.37□□□□□ -1.87
PEX21YGR239C KTR6P54070 446 aa3.37□□□□□ -1.87
PEX21YGR239C RMI1Q02685 241 aa3.37□□□□□ -1.87
PEX21YGR239C FAR10Q06001 478 aa3.37□□□□□ -1.87
PEX21YGR239C MCH1Q07376 486 aa3.37□□□□□ -1.87
PEX21YGR239C RPN8Q08723 338 aaKnown RBP3.37□□□□□ -1.87
PEX21YGR239C LAG2Q92325 660 aa3.37□□□□□ -1.87
PEX21YGR239C COY1P34237 679 aa3.36□□□□□ -1.87
PEX21YGR239C TAE1P38340 232 aa3.36□□□□□ -1.87
PEX21YGR239C PET100P38958 111 aa3.36□□□□□ -1.87
PEX21YGR239C SHQ1P40486 507 aaPredicted RBP3.36□□□□□ -1.87
PEX21YGR239C BNA6P43619 295 aa3.36□□□□□ -1.87
PEX21YGR239C UBC13P52490 153 aa3.36□□□□□ -1.87
PEX21YGR239C YGL262WP53054 175 aa3.36□□□□□ -1.87
PEX21YGR239C VHT1P53241 593 aa3.36□□□□□ -1.87
PEX21YGR239C YNL134CP53912 376 aaKnown RBP3.36□□□□□ -1.87
PEX21YGR239C HAL1Q01766 294 aa3.36□□□□□ -1.87
PEX21YGR239C MRPS16Q02608 121 aa3.36□□□□□ -1.87
PEX21YGR239C GMC2Q06201 188 aa3.36□□□□□ -1.87
PEX21YGR239C BI3Q9ZZW7 517 aa3.36□□□□□ -1.87
PEX21YGR239C HPR1P17629 752 aaKnown RBP3.35□□□□□ -1.87
PEX21YGR239C MET16P18408 261 aaPredicted RBP3.35□□□□□ -1.87
PEX21YGR239C SPT4P32914 102 aaPredicted RBP3.35□□□□□ -1.87
PEX21YGR239C RPT5P33297 434 aaKnown RBP3.35□□□□□ -1.87
PEX21YGR239C RCK1P38622 512 aa3.35□□□□□ -1.87
PEX21YGR239C COA1P40452 197 aa3.35□□□□□ -1.87
PEX21YGR239C AGX1P43567 385 aa3.35□□□□□ -1.87
PEX21YGR239C YGL039WP53183 348 aaKnown RBP3.35□□□□□ -1.87
PEX21YGR239C YMR209CQ03648 457 aa3.35□□□□□ -1.87
PEX21YGR239C API2Q04413 109 aa3.35□□□□□ -1.87
PEX21YGR239C CTS2Q06350 511 aa3.35□□□□□ -1.87
PEX21YGR239C TAZ1Q06510 381 aa3.35□□□□□ -1.87
PEX21YGR239C MIM1Q08176 113 aa3.35□□□□□ -1.87
PEX21YGR239C TY3A-GQ12173 290 aa3.35□□□□□ -1.87
PEX21YGR239C YPL245WQ12179 454 aaKnown RBP3.35□□□□□ -1.87
PEX21YGR239C TY3A-IQ99219 290 aa3.35□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms