RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C RIB3Q99258 208 aa4.54□□□□□ -1.68
SEC9YGR009C VPS15P22219 1454 aa4.54□□□□□ -1.68
SEC9YGR009C PDE1P22434 369 aa4.53□□□□□ -1.68
SEC9YGR009C GBP2P25555 427 aaKnown RBP RIP-Chip data4.53□□□□□ -1.68 RIP-Chip
SEC9YGR009C TIR2P33890 251 aa4.53□□□□□ -1.68
SEC9YGR009C AUR1P36107 401 aaPredicted RBP4.53□□□□□ -1.68
SEC9YGR009C IRS4P36115 615 aaKnown RBP4.53□□□□□ -1.68
SEC9YGR009C ARA1P38115 344 aa4.53□□□□□ -1.68
SEC9YGR009C GIC1P38785 314 aa4.53□□□□□ -1.68
SEC9YGR009C LSM4P40070 187 aaKnown RBP4.53□□□□□ -1.68
SEC9YGR009C UBC9P50623 157 aaPredicted RBP4.53□□□□□ -1.68
SEC9YGR009C YIP5P53108 310 aa4.53□□□□□ -1.68
SEC9YGR009C MAL13P53338 473 aa4.53□□□□□ -1.68
SEC9YGR009C PKR1Q03880 122 aaKnown RBP4.53□□□□□ -1.68
SEC9YGR009C ADH6Q04894 360 aaKnown RBP4.53□□□□□ -1.68
SEC9YGR009C TRI1Q05024 226 aa4.53□□□□□ -1.68
SEC9YGR009C PUS5Q06244 254 aa4.53□□□□□ -1.68
SEC9YGR009C MED7Q08278 222 aa4.53□□□□□ -1.68
SEC9YGR009C AFT2Q08957 416 aa4.53□□□□□ -1.68
SEC9YGR009C RKI1Q12189 258 aa4.53□□□□□ -1.68
SEC9YGR009C PST2Q12335 198 aaKnown RBP4.53□□□□□ -1.68
SEC9YGR009C GTT2Q12390 233 aa4.53□□□□□ -1.68
SEC9YGR009C RMD5Q12508 421 aa4.53□□□□□ -1.68
SEC9YGR009C RPP0P05317 312 aaKnown RBP4.53□□□□□ -1.68
SEC9YGR009C YEL076C-AP0CX16 216 aa4.53□□□□□ -1.68
SEC9YGR009C YLR464WP0CX17 216 aa4.53□□□□□ -1.68
SEC9YGR009C RPL3P14126 387 aaKnown RBP4.53□□□□□ -1.68
SEC9YGR009C SGV1P23293 657 aaKnown RBP4.53□□□□□ -1.68
SEC9YGR009C PUT3P25502 979 aaPredicted RBP4.53□□□□□ -1.68
SEC9YGR009C ARO7P32178 256 aa4.53□□□□□ -1.68
SEC9YGR009C EMC3P36039 253 aa4.53□□□□□ -1.68
SEC9YGR009C UTP30P36144 274 aaKnown RBP4.53□□□□□ -1.68
SEC9YGR009C APL3P38065 1025 aa4.53□□□□□ -1.68
SEC9YGR009C YBR137WP38276 179 aa4.53□□□□□ -1.68
SEC9YGR009C HIS2P38635 335 aa4.53□□□□□ -1.68
SEC9YGR009C IPI1P38803 334 aaPredicted RBP4.53□□□□□ -1.68
SEC9YGR009C YEL076CP39971 216 aa4.53□□□□□ -1.68
SEC9YGR009C YJR079WP47126 109 aa4.53□□□□□ -1.68
SEC9YGR009C GPI17Q04080 534 aa4.53□□□□□ -1.68
SEC9YGR009C DLT1Q04216 342 aa4.53□□□□□ -1.68
SEC9YGR009C PRM6Q04705 352 aa4.53□□□□□ -1.68
SEC9YGR009C YMR074CQ04773 145 aa4.53□□□□□ -1.68
SEC9YGR009C BNA5Q05979 453 aa4.53□□□□□ -1.68
SEC9YGR009C MRPL35Q06678 367 aa4.53□□□□□ -1.68
SEC9YGR009C ASR1Q06834 288 aa4.53□□□□□ -1.68
SEC9YGR009C FOL3Q12676 427 aaPredicted RBP4.53□□□□□ -1.68
SEC9YGR009C GEA1P47102 1408 aaPredicted RBP4.52□□□□□ -1.69
SEC9YGR009C CYC3P06182 269 aa4.52□□□□□ -1.69
SEC9YGR009C BCY1P07278 416 aaKnown RBP4.52□□□□□ -1.69
SEC9YGR009C TY2A-LR1P0C2J4 438 aa4.52□□□□□ -1.69
SEC9YGR009C TY2A-FP0CX61 438 aa4.52□□□□□ -1.69
SEC9YGR009C TY2A-GR2P0CX62 438 aa4.52□□□□□ -1.69
SEC9YGR009C GPI12P23797 304 aa4.52□□□□□ -1.69
SEC9YGR009C TY2A-CP25383 438 aa4.52□□□□□ -1.69
SEC9YGR009C PPZ1P26570 692 aa4.52□□□□□ -1.69
SEC9YGR009C YEF1P32622 495 aa4.52□□□□□ -1.69
SEC9YGR009C SGE1P33335 543 aa4.52□□□□□ -1.69
SEC9YGR009C SCD5P34758 872 aa4.52□□□□□ -1.69
SEC9YGR009C YKL077WP36081 392 aa4.52□□□□□ -1.69
SEC9YGR009C TRM7P38238 310 aaKnown RBP4.52□□□□□ -1.69
SEC9YGR009C ARN1P38731 627 aa4.52□□□□□ -1.69
SEC9YGR009C PHO90P39535 881 aa4.52□□□□□ -1.69
SEC9YGR009C SMB1P40018 196 aaKnown RBP4.52□□□□□ -1.69
SEC9YGR009C BMT5P40493 336 aa4.52□□□□□ -1.69
SEC9YGR009C YIR016WP40572 265 aa4.52□□□□□ -1.69
SEC9YGR009C YIR035CP40579 254 aa4.52□□□□□ -1.69
SEC9YGR009C GAT1P43574 510 aa4.52□□□□□ -1.69
SEC9YGR009C ERJ5P43613 295 aaPredicted RBP4.52□□□□□ -1.69
SEC9YGR009C YJL043WP47053 257 aa4.52□□□□□ -1.69
SEC9YGR009C LGE1Q02796 332 aaKnown RBP4.52□□□□□ -1.69
SEC9YGR009C DIG2Q03373 323 aaKnown RBP4.52□□□□□ -1.69
SEC9YGR009C TY2A-DR2Q03483 438 aa4.52□□□□□ -1.69
SEC9YGR009C TMA23Q03525 211 aa4.52□□□□□ -1.69
SEC9YGR009C NKP2Q06162 153 aa4.52□□□□□ -1.69
SEC9YGR009C IRC10Q08118 586 aa4.52□□□□□ -1.69
SEC9YGR009C YLL056CQ12177 298 aa4.52□□□□□ -1.69
SEC9YGR009C TY2A-BQ12260 438 aa4.52□□□□□ -1.69
SEC9YGR009C TY1A-BLQ12266 440 aa4.52□□□□□ -1.69
SEC9YGR009C TY2A-OR2Q12293 438 aa4.52□□□□□ -1.69
SEC9YGR009C TY2A-DR1Q12392 438 aa4.52□□□□□ -1.69
SEC9YGR009C TY2A-OR1Q12439 438 aa4.52□□□□□ -1.69
SEC9YGR009C YGL194C-AQ2V2P6 80 aa4.52□□□□□ -1.69
SEC9YGR009C YPR014CQ6B0W2 109 aa4.52□□□□□ -1.69
SEC9YGR009C YKL033W-AQ86ZR7 236 aa4.52□□□□□ -1.69
SEC9YGR009C TY2A-DR3Q99303 438 aa4.52□□□□□ -1.69
SEC9YGR009C UFD4P33202 1483 aa4.51□□□□□ -1.69
SEC9YGR009C YOR1P53049 1477 aa4.51□□□□□ -1.69
SEC9YGR009C GDH1P07262 454 aaKnown RBP4.51□□□□□ -1.69
SEC9YGR009C SPS2P08459 502 aa4.51□□□□□ -1.69
SEC9YGR009C CTA1P15202 515 aa4.51□□□□□ -1.69
SEC9YGR009C SAM2P19358 384 aaKnown RBP4.51□□□□□ -1.69
SEC9YGR009C PHO80P20052 293 aa4.51□□□□□ -1.69
SEC9YGR009C SEC22P22214 214 aa4.51□□□□□ -1.69
SEC9YGR009C NAR1P23503 491 aaKnown RBP4.51□□□□□ -1.69
SEC9YGR009C ERG8P24521 451 aa4.51□□□□□ -1.69
SEC9YGR009C PCL1P24867 279 aa4.51□□□□□ -1.69
SEC9YGR009C UTR2P32623 467 aa4.51□□□□□ -1.69
SEC9YGR009C YKR051WP36142 418 aa4.51□□□□□ -1.69
SEC9YGR009C BTT1P40314 149 aaPredicted RBP4.51□□□□□ -1.69
SEC9YGR009C ARG2P40360 574 aa4.51□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms