RNA–Protein interactions for RNA: YGL025C

PGD1, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene PGD1, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGD1YGL025C ACT1P60010 375 aaKnown RBP2.18□□□□□ -2.06
PGD1YGL025C PSY3Q12318 242 aa2.18□□□□□ -2.06
PGD1YGL025C TRM10Q12400 293 aa2.18□□□□□ -2.06
PGD1YGL025C DAL81P21657 970 aa2.17□□□□□ -2.06
PGD1YGL025C MRPL20P22354 195 aaPredicted RBP2.17□□□□□ -2.06
PGD1YGL025C INO2P26798 304 aa2.17□□□□□ -2.06
PGD1YGL025C PET8P38921 284 aa2.17□□□□□ -2.06
PGD1YGL025C SMC2P38989 1170 aaKnown RBP2.17□□□□□ -2.06
PGD1YGL025C YGL114WP53134 725 aa2.17□□□□□ -2.06
PGD1YGL025C YNL146WP53906 100 aa2.17□□□□□ -2.06
PGD1YGL025C DTD1Q07648 150 aaKnown RBP2.17□□□□□ -2.06
PGD1YGL025C YLR012CQ07927 99 aa2.17□□□□□ -2.06
PGD1YGL025C SGT2Q12118 346 aaKnown RBP2.17□□□□□ -2.06
PGD1YGL025C YDR262WQ12331 272 aa2.17□□□□□ -2.06
PGD1YGL025C RBK1P25332 333 aa2.16□□□□□ -2.06
PGD1YGL025C YEL043WP32618 956 aa2.16□□□□□ -2.06
PGD1YGL025C ALK2P32789 676 aaPredicted RBP2.16□□□□□ -2.06
PGD1YGL025C APE4P38821 490 aa2.16□□□□□ -2.06
PGD1YGL025C ASP1P38986 381 aaPredicted RBP2.16□□□□□ -2.06
PGD1YGL025C YFR045WP43617 309 aa2.16□□□□□ -2.06
PGD1YGL025C PDR16P53860 351 aaKnown RBP2.16□□□□□ -2.06
PGD1YGL025C TFC7Q12415 435 aa2.16□□□□□ -2.06
PGD1YGL025C ITR2P30606 609 aa2.15□□□□□ -2.07
PGD1YGL025C MEI5P32489 222 aa2.15□□□□□ -2.07
PGD1YGL025C CAB3P36076 571 aa2.15□□□□□ -2.07
PGD1YGL025C CTM1P38818 585 aa2.15□□□□□ -2.07
PGD1YGL025C LIN1P38852 340 aaPredicted RBP2.15□□□□□ -2.07
PGD1YGL025C NAS2P40555 220 aa2.15□□□□□ -2.07
PGD1YGL025C YFL040WP43562 540 aa2.15□□□□□ -2.07
PGD1YGL025C FYV8P46949 817 aaKnown RBP2.15□□□□□ -2.07
PGD1YGL025C YNR066CP53752 436 aa2.15□□□□□ -2.07
PGD1YGL025C DXO1Q06349 442 aa2.15□□□□□ -2.07
PGD1YGL025C VMA5P31412 392 aaKnown RBP2.14□□□□□ -2.07
PGD1YGL025C ACB1P31787 87 aa2.14□□□□□ -2.07
PGD1YGL025C PPQ1P32945 549 aa2.14□□□□□ -2.07
PGD1YGL025C YGL088WP53151 121 aa2.14□□□□□ -2.07
PGD1YGL025C UBX2Q04228 584 aa2.14□□□□□ -2.07
PGD1YGL025C YPR063CQ12160 140 aa2.14□□□□□ -2.07
PGD1YGL025C YPL245WQ12179 454 aaKnown RBP2.14□□□□□ -2.07
PGD1YGL025C ERP3Q12403 225 aa2.14□□□□□ -2.07
PGD1YGL025C CBP2P03874 630 aaPredicted RBP2.13□□□□□ -2.07
PGD1YGL025C MIG1P27705 504 aa2.13□□□□□ -2.07
PGD1YGL025C MED8P38304 223 aa2.13□□□□□ -2.07
PGD1YGL025C HSH155P49955 971 aaKnown RBP2.13□□□□□ -2.07
PGD1YGL025C SHE4P51534 789 aa2.13□□□□□ -2.07
PGD1YGL025C YNL040WP53960 456 aaPredicted RBP2.13□□□□□ -2.07
PGD1YGL025C YPL113CQ02961 396 aa2.13□□□□□ -2.07
PGD1YGL025C RVB1Q03940 463 aaKnown RBP2.13□□□□□ -2.07
PGD1YGL025C TDH2P00358 332 aaKnown RBP2.12□□□□□ -2.07
PGD1YGL025C TDH3P00359 332 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
PGD1YGL025C RNR2P09938 399 aaKnown RBP2.12□□□□□ -2.07
PGD1YGL025C CDC42P19073 191 aa2.12□□□□□ -2.07
PGD1YGL025C UTR5P32630 166 aa2.12□□□□□ -2.07
PGD1YGL025C SUR1P33300 382 aa2.12□□□□□ -2.07
PGD1YGL025C UIP5P36137 443 aa2.12□□□□□ -2.07
PGD1YGL025C CSI1Q04368 295 aa2.12□□□□□ -2.07
PGD1YGL025C BUR2Q05949 395 aa2.12□□□□□ -2.07
PGD1YGL025C STE23Q06010 1027 aa2.12□□□□□ -2.07
PGD1YGL025C MET2P08465 486 aa2.11□□□□□ -2.07
PGD1YGL025C RPL18AP0CX49 186 aaKnown RBP2.11□□□□□ -2.07
PGD1YGL025C RPL18BP0CX50 186 aaKnown RBP2.11□□□□□ -2.07
PGD1YGL025C PRE7P23724 241 aaKnown RBP2.11□□□□□ -2.07
PGD1YGL025C SOP4P39543 234 aaPredicted RBP2.11□□□□□ -2.07
PGD1YGL025C EDC2P40023 145 aaPredicted RBP2.11□□□□□ -2.07
PGD1YGL025C YOR292CQ08743 309 aa2.11□□□□□ -2.07
PGD1YGL025C IES3Q12345 250 aa2.11□□□□□ -2.07
PGD1YGL025C GAL3P13045 520 aa2.1□□□□□ -2.07
PGD1YGL025C ERD1P16151 362 aa2.1□□□□□ -2.07
PGD1YGL025C VPH1P32563 840 aaKnown RBP2.1□□□□□ -2.07
PGD1YGL025C YBR062CP38239 180 aa2.1□□□□□ -2.07
PGD1YGL025C SCC4P40090 624 aa2.1□□□□□ -2.07
PGD1YGL025C ECO1P43605 281 aa2.1□□□□□ -2.07
PGD1YGL025C BUD13P46947 266 aaPredicted RBP2.1□□□□□ -2.07
PGD1YGL025C UFD1P53044 361 aa2.1□□□□□ -2.07
PGD1YGL025C YGR168CP53293 376 aa2.1□□□□□ -2.07
PGD1YGL025C KRE1P17260 313 aa2.09□□□□□ -2.07
PGD1YGL025C SMI1P32566 505 aa2.09□□□□□ -2.07
PGD1YGL025C GPX1P36014 167 aa2.09□□□□□ -2.07
PGD1YGL025C YKL162CP36052 402 aa2.09□□□□□ -2.07
PGD1YGL025C INA22P40576 216 aa2.09□□□□□ -2.07
PGD1YGL025C YPL080CQ02826 108 aa2.09□□□□□ -2.07
PGD1YGL025C SNX41Q04053 625 aa2.09□□□□□ -2.07
PGD1YGL025C SEC13Q04491 297 aaKnown RBP2.09□□□□□ -2.07
PGD1YGL025C RLP24Q07915 199 aaKnown RBP2.09□□□□□ -2.07
PGD1YGL025C CLP1Q08685 445 aaPredicted RBP2.09□□□□□ -2.07
PGD1YGL025C VPH2P32341 215 aa2.08□□□□□ -2.08
PGD1YGL025C SWI3P32591 825 aa2.08□□□□□ -2.08
PGD1YGL025C CSE1P33307 960 aa2.08□□□□□ -2.08
PGD1YGL025C BLI1P35727 113 aa2.08□□□□□ -2.08
PGD1YGL025C YER084WP40057 128 aa2.08□□□□□ -2.08
PGD1YGL025C YGR016WP53209 190 aa2.08□□□□□ -2.08
PGD1YGL025C IRC4Q03036 179 aa2.08□□□□□ -2.08
PGD1YGL025C MIX17Q03667 156 aa2.08□□□□□ -2.08
PGD1YGL025C VIK1Q12045 647 aa2.08□□□□□ -2.08
PGD1YGL025C YAL063C-AQ3E791 96 aa2.08□□□□□ -2.08
PGD1YGL025C AIM29P36154 155 aa2.07□□□□□ -2.08
PGD1YGL025C YHR035WP38769 630 aa2.07□□□□□ -2.08
PGD1YGL025C YDR114CQ04597 100 aa2.07□□□□□ -2.08
PGD1YGL025C YLR446WQ06204 433 aa2.07□□□□□ -2.08
PGD1YGL025C MRX4Q12467 430 aa2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 40.6 ms