RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W YNR048WP53740 393 aa2.53□□□□□ -2
PRE1YER012W OCA2P53949 197 aa2.53□□□□□ -2
PRE1YER012W YMR130WQ04223 302 aa2.53□□□□□ -2
PRE1YER012W HSP31Q04432 237 aa2.53□□□□□ -2
PRE1YER012W ERV41Q04651 352 aa2.53□□□□□ -2
PRE1YER012W STE2D6VTK4 431 aa2.52□□□□□ -2.01
PRE1YER012W CDC21P06785 304 aa2.52□□□□□ -2.01
PRE1YER012W IMA3P0CW40 589 aa2.52□□□□□ -2.01
PRE1YER012W IMA4P0CW41 589 aa2.52□□□□□ -2.01
PRE1YER012W ARO3P14843 370 aaKnown RBP2.52□□□□□ -2.01
PRE1YER012W SEC14P24280 304 aaKnown RBP2.52□□□□□ -2.01
PRE1YER012W RRP7P25368 297 aaPredicted RBP2.52□□□□□ -2.01
PRE1YER012W MXR2P25566 168 aa2.52□□□□□ -2.01
PRE1YER012W YCL068CP25593 260 aa2.52□□□□□ -2.01
PRE1YER012W MGT1P26188 188 aa2.52□□□□□ -2.01
PRE1YER012W SMI1P32566 505 aa2.52□□□□□ -2.01
PRE1YER012W MGM101P32787 269 aaKnown RBP2.52□□□□□ -2.01
PRE1YER012W RFC3P38629 340 aa2.52□□□□□ -2.01
PRE1YER012W SMF2P38778 549 aa2.52□□□□□ -2.01
PRE1YER012W YNL320WP42840 284 aa2.52□□□□□ -2.01
PRE1YER012W YGR266WP53326 701 aa2.52□□□□□ -2.01
PRE1YER012W YNL247WP53852 767 aaKnown RBP2.52□□□□□ -2.01
PRE1YER012W OSH6Q02201 448 aa2.52□□□□□ -2.01
PRE1YER012W URH1Q04179 340 aa2.52□□□□□ -2.01
PRE1YER012W DCS1Q06151 350 aa2.52□□□□□ -2.01
PRE1YER012W IMA2Q08295 589 aa2.52□□□□□ -2.01
PRE1YER012W AAD15Q08361 143 aa2.52□□□□□ -2.01
PRE1YER012W UAF30Q08747 228 aa2.52□□□□□ -2.01
PRE1YER012W YDR262WQ12331 272 aa2.52□□□□□ -2.01
PRE1YER012W YMR030W-AQ3E760 96 aa2.52□□□□□ -2.01
PRE1YER012W CDC39P25655 2108 aaKnown RBP2.51□□□□□ -2.01
PRE1YER012W UTP20P35194 2493 aaKnown RBP2.51□□□□□ -2.01
PRE1YER012W PHO84P25297 587 aaKnown RBP2.51□□□□□ -2.01
PRE1YER012W REC114P32841 428 aa2.51□□□□□ -2.01
PRE1YER012W PRP18P33411 251 aaPredicted RBP2.51□□□□□ -2.01
PRE1YER012W SOR1P35497 357 aaKnown RBP2.51□□□□□ -2.01
PRE1YER012W RRP4P38792 359 aaKnown RBP2.51□□□□□ -2.01
PRE1YER012W SCC4P40090 624 aa2.51□□□□□ -2.01
PRE1YER012W JEM1P40358 645 aa2.51□□□□□ -2.01
PRE1YER012W YJL055WP47044 245 aa2.51□□□□□ -2.01
PRE1YER012W BIR1P47134 954 aa2.51□□□□□ -2.01
PRE1YER012W PHB2P50085 310 aa2.51□□□□□ -2.01
PRE1YER012W HOT1Q03213 719 aa2.51□□□□□ -2.01
PRE1YER012W RPN9Q04062 393 aaKnown RBP2.51□□□□□ -2.01
PRE1YER012W VAC14Q06708 880 aa2.51□□□□□ -2.01
PRE1YER012W SOR2Q07786 357 aa2.51□□□□□ -2.01
PRE1YER012W DCI1Q08558 271 aa2.51□□□□□ -2.01
PRE1YER012W RPN8Q08723 338 aaKnown RBP2.51□□□□□ -2.01
PRE1YER012W RPN5Q12250 445 aaKnown RBP2.51□□□□□ -2.01
PRE1YER012W ORT1Q12375 292 aa2.51□□□□□ -2.01
PRE1YER012W IZH2Q12442 317 aa2.51□□□□□ -2.01
PRE1YER012W ILV5P06168 395 aaKnown RBP2.5□□□□□ -2.01
PRE1YER012W CMD1P06787 147 aaKnown RBP2.5□□□□□ -2.01
PRE1YER012W CPA1P07258 411 aaKnown RBP2.5□□□□□ -2.01
PRE1YER012W GAL7P08431 366 aa2.5□□□□□ -2.01
PRE1YER012W RPL43AP0CX25 92 aaKnown RBP2.5□□□□□ -2.01
PRE1YER012W RPL43BP0CX26 92 aa2.5□□□□□ -2.01
PRE1YER012W POL30P15873 258 aaKnown RBP2.5□□□□□ -2.01
PRE1YER012W SPO7P18410 259 aa2.5□□□□□ -2.01
PRE1YER012W CHA1P25379 360 aaKnown RBP2.5□□□□□ -2.01
PRE1YER012W MDL1P33310 695 aa2.5□□□□□ -2.01
PRE1YER012W GDI1P39958 451 aaKnown RBP2.5□□□□□ -2.01
PRE1YER012W PHB1P40961 287 aa2.5□□□□□ -2.01
PRE1YER012W SEC27P41811 889 aaKnown RBP2.5□□□□□ -2.01
PRE1YER012W JHD2P47156 728 aaPredicted RBP2.5□□□□□ -2.01
PRE1YER012W HMS2P47175 358 aa2.5□□□□□ -2.01
PRE1YER012W CWC22P53333 577 aaKnown RBP2.5□□□□□ -2.01
PRE1YER012W ALF1P53904 254 aa2.5□□□□□ -2.01
PRE1YER012W RHO3Q00245 231 aaKnown RBP2.5□□□□□ -2.01
PRE1YER012W EGD1Q02642 157 aaKnown RBP2.5□□□□□ -2.01
PRE1YER012W GOT1Q03554 138 aa2.5□□□□□ -2.01
PRE1YER012W RCF1Q03713 159 aa2.5□□□□□ -2.01
PRE1YER012W SML1Q04964 104 aa2.5□□□□□ -2.01
PRE1YER012W RKM1Q08961 583 aaPredicted RBP2.5□□□□□ -2.01
PRE1YER012W SEC16P48415 2195 aaKnown RBP2.49□□□□□ -2.01
PRE1YER012W DYN1P36022 4092 aa2.49□□□□□ -2.01
PRE1YER012W ARG4P04076 463 aaPredicted RBP2.49□□□□□ -2.01
PRE1YER012W NAM2P11325 894 aa2.49□□□□□ -2.01
PRE1YER012W CKI1P20485 582 aa2.49□□□□□ -2.01
PRE1YER012W GCG1P32656 232 aaKnown RBP2.49□□□□□ -2.01
PRE1YER012W PTM1P32857 523 aa2.49□□□□□ -2.01
PRE1YER012W CYM1P32898 989 aa2.49□□□□□ -2.01
PRE1YER012W TIP20P33891 701 aa2.49□□□□□ -2.01
PRE1YER012W RRP1P35178 278 aaPredicted RBP2.49□□□□□ -2.01
PRE1YER012W ZTA1P38230 334 aaKnown RBP2.49□□□□□ -2.01
PRE1YER012W APE4P38821 490 aa2.49□□□□□ -2.01
PRE1YER012W FAD1P38913 306 aa2.49□□□□□ -2.01
PRE1YER012W VHS2P40463 436 aa2.49□□□□□ -2.01
PRE1YER012W YIL086CP40503 102 aa2.49□□□□□ -2.01
PRE1YER012W SEC28P40509 296 aaKnown RBP2.49□□□□□ -2.01
PRE1YER012W YJR011CP47086 261 aaPredicted RBP2.49□□□□□ -2.01
PRE1YER012W PET117Q02771 107 aa2.49□□□□□ -2.01
PRE1YER012W TAF12Q03761 539 aa2.49□□□□□ -2.01
PRE1YER012W YOL107WQ12239 342 aa2.49□□□□□ -2.01
PRE1YER012W YPL247CQ12523 523 aa2.49□□□□□ -2.01
PRE1YER012W QCR6P00127 147 aa2.48□□□□□ -2.01
PRE1YER012W SCEIP03882 235 aa2.48□□□□□ -2.01
PRE1YER012W BCY1P07278 416 aaKnown RBP2.48□□□□□ -2.01
PRE1YER012W STP22P25604 385 aa2.48□□□□□ -2.01
PRE1YER012W URA10P30402 227 aa2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms