RNA–Protein interactions for RNA: YEL024W

RIP1, Transcript of Ubiquinol-cytochrome-c reductase, yeast

Gene RIP1, Length 648 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIP1	YEL024W	HOM3	P10869	527 aa		4.17	□□□□□ -1.74
RIP1	YEL024W	FUR1	P18562	216 aa	Known RBP	4.17	□□□□□ -1.74
RIP1	YEL024W	UTR1	P21373	530 aa		4.17	□□□□□ -1.74
RIP1	YEL024W	RPA135	P22138	1203 aa	Known RBP	4.17	□□□□□ -1.74
RIP1	YEL024W	NPR1	P22211	790 aa		4.17	□□□□□ -1.74
RIP1	YEL024W	MGR1	P25573	417 aa		4.17	□□□□□ -1.74
RIP1	YEL024W	YCR102C	P25608	368 aa		4.17	□□□□□ -1.74
RIP1	YEL024W	FUN19	P28003	413 aa	Predicted RBP	4.17	□□□□□ -1.74
RIP1	YEL024W	SRB5	P32585	307 aa		4.17	□□□□□ -1.74
RIP1	YEL024W	ARC19	P33204	171 aa	Known RBP	4.17	□□□□□ -1.74
RIP1	YEL024W	SFK1	P35735	353 aa		4.17	□□□□□ -1.74
RIP1	YEL024W	VBA2	P38358	474 aa	Known RBP	4.17	□□□□□ -1.74
RIP1	YEL024W	LEU5	P38702	357 aa		4.17	□□□□□ -1.74
RIP1	YEL024W	DED81	P38707	554 aa	Known RBP	4.17	□□□□□ -1.74
RIP1	YEL024W	HTD2	P38790	280 aa	Known RBP	4.17	□□□□□ -1.74
RIP1	YEL024W	AIM46	P38885	310 aa		4.17	□□□□□ -1.74
RIP1	YEL024W	FET3	P38993	636 aa		4.17	□□□□□ -1.74
RIP1	YEL024W	MBP1	P39678	833 aa		4.17	□□□□□ -1.74
RIP1	YEL024W	AZF1	P41696	914 aa		4.17	□□□□□ -1.74
RIP1	YEL024W	SFH5	P47008	294 aa		4.17	□□□□□ -1.74
RIP1	YEL024W	BPL1	P48445	690 aa	Predicted RBP	4.17	□□□□□ -1.74
RIP1	YEL024W	GNP1	P48813	663 aa		4.17	□□□□□ -1.74
RIP1	YEL024W	PHB2	P50085	310 aa		4.17	□□□□□ -1.74
RIP1	YEL024W	VPS73	P53142	486 aa	Known RBP	4.17	□□□□□ -1.74
RIP1	YEL024W	SGF73	P53165	657 aa		4.17	□□□□□ -1.74
RIP1	YEL024W	OGG1	P53397	376 aa	Predicted RBP	4.17	□□□□□ -1.74
RIP1	YEL024W	CWC24	P53769	259 aa		4.17	□□□□□ -1.74
RIP1	YEL024W	TIM44	Q01852	431 aa		4.17	□□□□□ -1.74
RIP1	YEL024W	KAP120	Q02932	1032 aa		4.17	□□□□□ -1.74
RIP1	YEL024W	MSC1	Q03104	513 aa		4.17	□□□□□ -1.74
RIP1	YEL024W	PLB2	Q03674	706 aa		4.17	□□□□□ -1.74
RIP1	YEL024W	ROT1	Q03691	256 aa		4.17	□□□□□ -1.74
RIP1	YEL024W	MTQ2	Q03920	221 aa	Predicted RBP	4.17	□□□□□ -1.74
RIP1	YEL024W	OPI10	Q08202	246 aa		4.17	□□□□□ -1.74
RIP1	YEL024W	AEP3	Q12089	606 aa		4.17	□□□□□ -1.74
RIP1	YEL024W	LEU9	Q12166	604 aa	Known RBP	4.17	□□□□□ -1.74
RIP1	YEL024W	YOL107W	Q12239	342 aa		4.17	□□□□□ -1.74
RIP1	YEL024W	YDL177C	Q12257	170 aa		4.17	□□□□□ -1.74
RIP1	YEL024W	YHR213W-A	Q8TGT4	77 aa		4.17	□□□□□ -1.74
RIP1	YEL024W	PRP2	P20095	876 aa	Predicted RBP	4.16	□□□□□ -1.74
RIP1	YEL024W	PUT3	P25502	979 aa	Predicted RBP	4.16	□□□□□ -1.74
RIP1	YEL024W	PBN1	P25580	416 aa		4.16	□□□□□ -1.74
RIP1	YEL024W	MRP17	P28778	131 aa		4.16	□□□□□ -1.74
RIP1	YEL024W	PRE4	P30657	266 aa		4.16	□□□□□ -1.74
RIP1	YEL024W	PDC2	P32896	925 aa		4.16	□□□□□ -1.74
RIP1	YEL024W	LST4	P34239	828 aa		4.16	□□□□□ -1.74
RIP1	YEL024W	VPS51	P36116	164 aa		4.16	□□□□□ -1.74
RIP1	YEL024W	THI2	P38141	450 aa		4.16	□□□□□ -1.74
RIP1	YEL024W	TAE1	P38340	232 aa		4.16	□□□□□ -1.74
RIP1	YEL024W	RRP3	P38712	501 aa	Known RBP	4.16	□□□□□ -1.74
RIP1	YEL024W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
RIP1	YEL024W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
RIP1	YEL024W	PHO90	P39535	881 aa		4.16	□□□□□ -1.74
RIP1	YEL024W	PRP39	P39682	629 aa	Known RBP	4.16	□□□□□ -1.74
RIP1	YEL024W	YER184C	P39961	794 aa		4.16	□□□□□ -1.74
RIP1	YEL024W	GIP2	P40036	548 aa		4.16	□□□□□ -1.74
RIP1	YEL024W	QDR1	P40475	563 aa		4.16	□□□□□ -1.74
RIP1	YEL024W	SYS1	P41544	203 aa		4.16	□□□□□ -1.74
RIP1	YEL024W	PMT6	P42934	759 aa		4.16	□□□□□ -1.74
RIP1	YEL024W	DOC1	P53068	250 aa		4.16	□□□□□ -1.74
RIP1	YEL024W	YGL235W	P53071	178 aa		4.16	□□□□□ -1.74
RIP1	YEL024W	HOS2	P53096	452 aa	Predicted RBP	4.16	□□□□□ -1.74
RIP1	YEL024W	ERG26	P53199	349 aa	Known RBP	4.16	□□□□□ -1.74
RIP1	YEL024W	MTM1	P53320	366 aa		4.16	□□□□□ -1.74
RIP1	YEL024W	RHO3	Q00245	231 aa	Known RBP	4.16	□□□□□ -1.74
RIP1	YEL024W	SNO4	Q04902	237 aa		4.16	□□□□□ -1.74
RIP1	YEL024W	YPR127W	Q06494	345 aa		4.16	□□□□□ -1.74
RIP1	YEL024W	YPR091C	Q06833	770 aa		4.16	□□□□□ -1.74
RIP1	YEL024W	CRT10	Q08226	957 aa		4.16	□□□□□ -1.74
RIP1	YEL024W	HSP33	Q08914	237 aa	Known RBP	4.16	□□□□□ -1.74
RIP1	YEL024W	HSP32	Q08992	237 aa		4.16	□□□□□ -1.74
RIP1	YEL024W	ATG41	Q12048	136 aa		4.16	□□□□□ -1.74
RIP1	YEL024W	YDL211C	Q12121	372 aa		4.16	□□□□□ -1.74
RIP1	YEL024W	RPS21B	Q3E754	87 aa	Known RBP	4.16	□□□□□ -1.74
RIP1	YEL024W	CDC9	P04819	755 aa		4.15	□□□□□ -1.75
RIP1	YEL024W	MRP2	P10663	115 aa	Predicted RBP	4.15	□□□□□ -1.75
RIP1	YEL024W	RPL3	P14126	387 aa	Known RBP	4.15	□□□□□ -1.75
RIP1	YEL024W	ERD1	P16151	362 aa		4.15	□□□□□ -1.75
RIP1	YEL024W	AAC3	P18238	307 aa		4.15	□□□□□ -1.75
RIP1	YEL024W	ATS1	P31386	333 aa		4.15	□□□□□ -1.75
RIP1	YEL024W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
RIP1	YEL024W	SRB6	P32570	121 aa		4.15	□□□□□ -1.75
RIP1	YEL024W	SUI1	P32911	108 aa	Known RBP	4.15	□□□□□ -1.75
RIP1	YEL024W	GPX1	P36014	167 aa		4.15	□□□□□ -1.75
RIP1	YEL024W	YKL077W	P36081	392 aa		4.15	□□□□□ -1.75
RIP1	YEL024W	BET3	P36149	193 aa		4.15	□□□□□ -1.75
RIP1	YEL024W	MRPL36	P36531	177 aa		4.15	□□□□□ -1.75
RIP1	YEL024W	YBR238C	P38330	731 aa	Known RBP	4.15	□□□□□ -1.75
RIP1	YEL024W	RRP4	P38792	359 aa	Known RBP	4.15	□□□□□ -1.75
RIP1	YEL024W	TRR2	P38816	342 aa		4.15	□□□□□ -1.75
RIP1	YEL024W	CCC1	P47818	322 aa		4.15	□□□□□ -1.75
RIP1	YEL024W	SRB7	P47822	140 aa		4.15	□□□□□ -1.75
RIP1	YEL024W	MTO1	P53070	669 aa		4.15	□□□□□ -1.75
RIP1	YEL024W	YGL204C	P53089	101 aa		4.15	□□□□□ -1.75
RIP1	YEL024W	CSL4	P53859	292 aa	Predicted RBP	4.15	□□□□□ -1.75
RIP1	YEL024W	CUZ1	P53899	274 aa		4.15	□□□□□ -1.75
RIP1	YEL024W	NRK1	P53915	240 aa		4.15	□□□□□ -1.75
RIP1	YEL024W	ASI3	P53983	676 aa		4.15	□□□□□ -1.75
RIP1	YEL024W	YPL113C	Q02961	396 aa		4.15	□□□□□ -1.75
RIP1	YEL024W	VBA1	Q04301	562 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms