RNA–Protein interactions for RNA: YDR317W

HIM1, Transcript of Protein of unknown function involved in DNA repair, yeast

Gene HIM1, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HIM1	YDR317W	YSW1	P38280	609 aa		3.39	□□□□□ -1.87
HIM1	YDR317W	CTK3	P46963	296 aa	Predicted RBP	3.39	□□□□□ -1.87
HIM1	YDR317W	MAL13	P53338	473 aa		3.39	□□□□□ -1.87
HIM1	YDR317W	OCA2	P53949	197 aa		3.39	□□□□□ -1.87
HIM1	YDR317W	EGD1	Q02642	157 aa	Known RBP	3.39	□□□□□ -1.87
HIM1	YDR317W	ACL4	Q03771	387 aa		3.39	□□□□□ -1.87
HIM1	YDR317W	PLB3	Q08108	686 aa		3.39	□□□□□ -1.87
HIM1	YDR317W	FDH1	Q08911	376 aa		3.39	□□□□□ -1.87
HIM1	YDR317W	SRL2	Q12020	392 aa		3.39	□□□□□ -1.87
HIM1	YDR317W	SMF3	Q12078	473 aa	Predicted RBP	3.39	□□□□□ -1.87
HIM1	YDR317W	ATG34	Q12292	412 aa		3.39	□□□□□ -1.87
HIM1	YDR317W	YOR012W	Q12351	137 aa		3.39	□□□□□ -1.87
HIM1	YDR317W	FMP27	Q06179	2628 aa		3.39	□□□□□ -1.87
HIM1	YDR317W	UBR1	P19812	1950 aa		3.38	□□□□□ -1.87
HIM1	YDR317W	RPL1A	P0CX43	217 aa	Known RBP	3.38	□□□□□ -1.87
HIM1	YDR317W	RPL1B	P0CX44	217 aa	Known RBP	3.38	□□□□□ -1.87
HIM1	YDR317W	GPA2	P10823	449 aa		3.38	□□□□□ -1.87
HIM1	YDR317W	PDX1	P16451	410 aa		3.38	□□□□□ -1.87
HIM1	YDR317W	SCL1	P21243	252 aa	Known RBP	3.38	□□□□□ -1.87
HIM1	YDR317W	YCR099C	P25657	155 aa		3.38	□□□□□ -1.87
HIM1	YDR317W	RRP1	P35178	278 aa	Predicted RBP	3.38	□□□□□ -1.87
HIM1	YDR317W	CHK1	P38147	527 aa		3.38	□□□□□ -1.87
HIM1	YDR317W	SPP381	P38282	291 aa	Predicted RBP	3.38	□□□□□ -1.87
HIM1	YDR317W	COX14	P39103	70 aa		3.38	□□□□□ -1.87
HIM1	YDR317W	CIS3	P47001	227 aa		3.38	□□□□□ -1.87
HIM1	YDR317W	ZRG17	P53735	605 aa		3.38	□□□□□ -1.87
HIM1	YDR317W	ERB1	Q04660	807 aa	Known RBP	3.38	□□□□□ -1.87
HIM1	YDR317W	CUE5	Q08412	411 aa	Known RBP	3.38	□□□□□ -1.87
HIM1	YDR317W	MTR10	Q99189	972 aa		3.38	□□□□□ -1.87
HIM1	YDR317W	SEN1	Q00416	2231 aa	Known RBP	3.38	□□□□□ -1.87
HIM1	YDR317W	IRA2	P19158	3079 aa		3.38	□□□□□ -1.87
HIM1	YDR317W	MDM35	O60200	86 aa		3.37	□□□□□ -1.87
HIM1	YDR317W	CBF1	P17106	351 aa		3.37	□□□□□ -1.87
HIM1	YDR317W	PPH21	P23594	369 aa		3.37	□□□□□ -1.87
HIM1	YDR317W	CLB1	P24868	471 aa		3.37	□□□□□ -1.87
HIM1	YDR317W	CWP1	P28319	239 aa		3.37	□□□□□ -1.87
HIM1	YDR317W	TPS2	P31688	896 aa	Known RBP	3.37	□□□□□ -1.87
HIM1	YDR317W	YPT52	P36018	234 aa	Known RBP	3.37	□□□□□ -1.87
HIM1	YDR317W	YHR045W	P38775	560 aa		3.37	□□□□□ -1.87
HIM1	YDR317W	SEO1	P39709	593 aa		3.37	□□□□□ -1.87
HIM1	YDR317W	GIM4	P40005	111 aa	Known RBP	3.37	□□□□□ -1.87
HIM1	YDR317W	YNL320W	P42840	284 aa		3.37	□□□□□ -1.87
HIM1	YDR317W	ZIM17	P42844	174 aa		3.37	□□□□□ -1.87
HIM1	YDR317W	YFL012W	P43580	148 aa		3.37	□□□□□ -1.87
HIM1	YDR317W	HAL1	Q01766	294 aa		3.37	□□□□□ -1.87
HIM1	YDR317W	MMT1	Q03218	510 aa		3.37	□□□□□ -1.87
HIM1	YDR317W	NHP10	Q03435	203 aa		3.37	□□□□□ -1.87
HIM1	YDR317W	HPT1	Q04178	221 aa	Known RBP	3.37	□□□□□ -1.87
HIM1	YDR317W	CDC123	Q05791	360 aa		3.37	□□□□□ -1.87
HIM1	YDR317W	RRP9	Q06506	573 aa	Known RBP	3.37	□□□□□ -1.87
HIM1	YDR317W	AEP3	Q12089	606 aa		3.37	□□□□□ -1.87
HIM1	YDR317W	ISN1	Q99312	450 aa		3.37	□□□□□ -1.87
HIM1	YDR317W	RAD1	P06777	1100 aa		3.36	□□□□□ -1.87
HIM1	YDR317W	RSR1	P13856	272 aa		3.36	□□□□□ -1.87
HIM1	YDR317W	RPB4	P20433	221 aa	Predicted RBP	3.36	□□□□□ -1.87
HIM1	YDR317W	PCL1	P24867	279 aa		3.36	□□□□□ -1.87
HIM1	YDR317W	RIM1	P32445	135 aa	Known RBP	3.36	□□□□□ -1.87
HIM1	YDR317W	TIP20	P33891	701 aa		3.36	□□□□□ -1.87
HIM1	YDR317W	LAS1	P36146	502 aa	Predicted RBP	3.36	□□□□□ -1.87
HIM1	YDR317W	TRM7	P38238	310 aa	Known RBP	3.36	□□□□□ -1.87
HIM1	YDR317W	SLM4	P38247	162 aa		3.36	□□□□□ -1.87
HIM1	YDR317W	YHI9	P38765	294 aa		3.36	□□□□□ -1.87
HIM1	YDR317W	TIM17	P39515	158 aa		3.36	□□□□□ -1.87
HIM1	YDR317W	YEL073C	P39974	107 aa		3.36	□□□□□ -1.87
HIM1	YDR317W	MEP1	P40260	492 aa		3.36	□□□□□ -1.87
HIM1	YDR317W	UTP18	P40362	594 aa	Predicted RBP	3.36	□□□□□ -1.87
HIM1	YDR317W	NRM1	P53718	249 aa		3.36	□□□□□ -1.87
HIM1	YDR317W	RRB1	Q04225	511 aa	Known RBP	3.36	□□□□□ -1.87
HIM1	YDR317W	SLD7	Q08457	257 aa		3.36	□□□□□ -1.87
HIM1	YDR317W	RAX1	Q08760	435 aa		3.36	□□□□□ -1.87
HIM1	YDR317W	JID1	Q12350	301 aa		3.36	□□□□□ -1.87
HIM1	YDR317W	ACC1	Q00955	2233 aa	Known RBP	3.35	□□□□□ -1.87
HIM1	YDR317W	STE2	D6VTK4	431 aa		3.35	□□□□□ -1.87
HIM1	YDR317W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	3.35	□□□□□ -1.87	RIP-Chip
HIM1	YDR317W	RPO26	P20435	155 aa		3.35	□□□□□ -1.87
HIM1	YDR317W	SKT5	P34226	696 aa		3.35	□□□□□ -1.87
HIM1	YDR317W	EFM1	P38732	585 aa		3.35	□□□□□ -1.87
HIM1	YDR317W	YHR182W	P38870	785 aa		3.35	□□□□□ -1.87
HIM1	YDR317W	YER079W	P40052	210 aa	Known RBP	3.35	□□□□□ -1.87
HIM1	YDR317W	SEC28	P40509	296 aa	Known RBP	3.35	□□□□□ -1.87
HIM1	YDR317W	MAM33	P40513	266 aa		3.35	□□□□□ -1.87
HIM1	YDR317W	BOL2	P53082	120 aa		3.35	□□□□□ -1.87
HIM1	YDR317W	CLD1	P53264	445 aa		3.35	□□□□□ -1.87
HIM1	YDR317W	YGR250C	P53316	781 aa	Known RBP	3.35	□□□□□ -1.87
HIM1	YDR317W	SPP2	Q02521	185 aa		3.35	□□□□□ -1.87
HIM1	YDR317W	STD1	Q02794	444 aa		3.35	□□□□□ -1.87
HIM1	YDR317W	TSA2	Q04120	196 aa		3.35	□□□□□ -1.87
HIM1	YDR317W	YLR177W	Q06251	628 aa		3.35	□□□□□ -1.87
HIM1	YDR317W	NOP6	Q07623	225 aa	Known RBP	3.35	□□□□□ -1.87
HIM1	YDR317W	YDR262W	Q12331	272 aa		3.35	□□□□□ -1.87
HIM1	YDR317W	CUP1-1	P0CX80	61 aa		3.34	□□□□□ -1.87
HIM1	YDR317W	CUP1-2	P0CX81	61 aa		3.34	□□□□□ -1.87
HIM1	YDR317W	DAL82	P21705	255 aa		3.34	□□□□□ -1.87
HIM1	YDR317W	ERV1	P27882	189 aa		3.34	□□□□□ -1.87
HIM1	YDR317W	CYS4	P32582	507 aa	Known RBP	3.34	□□□□□ -1.87
HIM1	YDR317W	MRPL37	P36532	105 aa		3.34	□□□□□ -1.87
HIM1	YDR317W	ETR1	P38071	380 aa		3.34	□□□□□ -1.87
HIM1	YDR317W	AIM10	P39965	576 aa	Known RBP	3.34	□□□□□ -1.87
HIM1	YDR317W	YFR057W	P43625	151 aa		3.34	□□□□□ -1.87
HIM1	YDR317W	YNL260C	P53846	198 aa		3.34	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 68.9 ms