RNA–Protein interactions for RNA: YDR086C

SSS1, Transcript of Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p), yeast

Gene SSS1, Length 243 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSS1	YDR086C	BUD2	P33314	1104 aa		0.7	□□□□□ -2.3
SSS1	YDR086C	MRPS5	P33759	307 aa		0.7	□□□□□ -2.3
SSS1	YDR086C	ATG7	P38862	630 aa		0.7	□□□□□ -2.3
SSS1	YDR086C	YFR054C	P43622	192 aa		0.7	□□□□□ -2.3
SSS1	YDR086C	YJR141W	P47172	347 aa	Predicted RBP	0.7	□□□□□ -2.3
SSS1	YDR086C	MYO5	Q04439	1219 aa	Known RBP	0.7	□□□□□ -2.3
SSS1	YDR086C	AIM33	Q04516	312 aa		0.7	□□□□□ -2.3
SSS1	YDR086C	MRX9	Q07349	420 aa	Known RBP	0.7	□□□□□ -2.3
SSS1	YDR086C	SPE3	Q12074	293 aa	Known RBP	0.7	□□□□□ -2.3
SSS1	YDR086C	RTC5	Q12108	567 aa	Known RBP	0.7	□□□□□ -2.3
SSS1	YDR086C	RPS16A	P0CX51	143 aa	Known RBP	0.69	□□□□□ -2.3
SSS1	YDR086C	RPS16B	P0CX52	143 aa	Known RBP	0.69	□□□□□ -2.3
SSS1	YDR086C	ZWF1	P11412	505 aa	Known RBP	0.69	□□□□□ -2.3
SSS1	YDR086C	DCC1	P25559	380 aa		0.69	□□□□□ -2.3
SSS1	YDR086C	PUP2	P32379	260 aa		0.69	□□□□□ -2.3
SSS1	YDR086C	AIM29	P36154	155 aa		0.69	□□□□□ -2.3
SSS1	YDR086C	HCH1	P53834	153 aa		0.69	□□□□□ -2.3
SSS1	YDR086C	GYL1	Q04322	720 aa		0.69	□□□□□ -2.3
SSS1	YDR086C	SPO77	Q06134	477 aa		0.69	□□□□□ -2.3
SSS1	YDR086C	YFH1	Q07540	174 aa		0.69	□□□□□ -2.3
SSS1	YDR086C	HIS3	P06633	220 aa		0.68	□□□□□ -2.3
SSS1	YDR086C	CDC42	P19073	191 aa		0.68	□□□□□ -2.3
SSS1	YDR086C	GDT1	P38301	280 aa	Predicted RBP	0.68	□□□□□ -2.3
SSS1	YDR086C	FYV8	P46949	817 aa	Known RBP	0.68	□□□□□ -2.3
SSS1	YDR086C	DAN1	P47178	298 aa		0.68	□□□□□ -2.3
SSS1	YDR086C	LIF1	P53150	421 aa		0.68	□□□□□ -2.3
SSS1	YDR086C	SSU72	P53538	206 aa	Predicted RBP	0.68	□□□□□ -2.3
SSS1	YDR086C	VPS9	P54787	451 aa		0.68	□□□□□ -2.3
SSS1	YDR086C	MIM1	Q08176	113 aa		0.68	□□□□□ -2.3
SSS1	YDR086C	VIK1	Q12045	647 aa		0.68	□□□□□ -2.3
SSS1	YDR086C	PRR2	Q12310	699 aa		0.68	□□□□□ -2.3
SSS1	YDR086C	AIM45	Q12480	344 aa	Known RBP	0.68	□□□□□ -2.3
SSS1	YDR086C	CKI1	P20485	582 aa		0.67	□□□□□ -2.3
SSS1	YDR086C	MMS21	P38632	267 aa		0.67	□□□□□ -2.3
SSS1	YDR086C	YMR134W	P40207	237 aa		0.67	□□□□□ -2.3
SSS1	YDR086C	MIG2	P53035	382 aa		0.67	□□□□□ -2.3
SSS1	YDR086C	MLC1	P53141	149 aa		0.67	□□□□□ -2.3
SSS1	YDR086C	BIO4	P53630	237 aa		0.67	□□□□□ -2.3
SSS1	YDR086C	YMR166C	Q03829	368 aa		0.67	□□□□□ -2.3
SSS1	YDR086C	NAT4	Q04751	285 aa		0.67	□□□□□ -2.3
SSS1	YDR086C	DCR2	Q05924	578 aa		0.67	□□□□□ -2.3
SSS1	YDR086C	ARC18	Q05933	178 aa	Known RBP	0.67	□□□□□ -2.3
SSS1	YDR086C	SUE1	Q06524	206 aa		0.67	□□□□□ -2.3
SSS1	YDR086C	HSP82	P02829	709 aa	Known RBP	0.66	□□□□□ -2.3
SSS1	YDR086C	REP1	P03871	373 aa		0.66	□□□□□ -2.3
SSS1	YDR086C	THR4	P16120	514 aa	Known RBP	0.66	□□□□□ -2.3
SSS1	YDR086C	MXR2	P25566	168 aa		0.66	□□□□□ -2.3
SSS1	YDR086C	HMX1	P32339	317 aa		0.66	□□□□□ -2.3
SSS1	YDR086C	SUR1	P33300	382 aa		0.66	□□□□□ -2.3
SSS1	YDR086C	TRM7	P38238	310 aa	Known RBP	0.66	□□□□□ -2.3
SSS1	YDR086C	PEX32	P38292	413 aa		0.66	□□□□□ -2.3
SSS1	YDR086C	YHR045W	P38775	560 aa		0.66	□□□□□ -2.3
SSS1	YDR086C	YHC3	P47040	408 aa		0.66	□□□□□ -2.3
SSS1	YDR086C	YNR066C	P53752	436 aa		0.66	□□□□□ -2.3
SSS1	YDR086C	OSH6	Q02201	448 aa		0.66	□□□□□ -2.3
SSS1	YDR086C	RDS3	Q06835	107 aa	Predicted RBP	0.66	□□□□□ -2.3
SSS1	YDR086C	EMC6	Q12431	108 aa		0.66	□□□□□ -2.3
SSS1	YDR086C	DPM1	P14020	267 aa	Known RBP	0.65	□□□□□ -2.31
SSS1	YDR086C	UTR1	P21373	530 aa		0.65	□□□□□ -2.31
SSS1	YDR086C	GCG1	P32656	232 aa	Known RBP	0.65	□□□□□ -2.31
SSS1	YDR086C	YHR122W	P38829	231 aa		0.65	□□□□□ -2.31
SSS1	YDR086C	EFM4	P40516	257 aa		0.65	□□□□□ -2.31
SSS1	YDR086C	YGR266W	P53326	701 aa		0.65	□□□□□ -2.31
SSS1	YDR086C	ALG9	P53868	555 aa	Known RBP	0.65	□□□□□ -2.31
SSS1	YDR086C	EBS1	Q03466	884 aa	Known RBP	0.65	□□□□□ -2.31
SSS1	YDR086C	RDL2	Q08742	149 aa	Known RBP	0.65	□□□□□ -2.31
SSS1	YDR086C	SFG1	Q12507	346 aa		0.65	□□□□□ -2.31
SSS1	YDR086C	TDH1	P00360	332 aa	Known RBP	0.64	□□□□□ -2.31
SSS1	YDR086C	RPL6B	P05739	176 aa	Known RBP	0.64	□□□□□ -2.31
SSS1	YDR086C	RAD1	P06777	1100 aa		0.64	□□□□□ -2.31
SSS1	YDR086C	MAS1	P10507	462 aa		0.64	□□□□□ -2.31
SSS1	YDR086C	RBK1	P25332	333 aa		0.64	□□□□□ -2.31
SSS1	YDR086C	MEI5	P32489	222 aa		0.64	□□□□□ -2.31
SSS1	YDR086C	MRPL6	P32904	214 aa		0.64	□□□□□ -2.31
SSS1	YDR086C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	0.64	□□□□□ -2.31	not detected
SSS1	YDR086C	FCY21	P40039	528 aa		0.64	□□□□□ -2.31
SSS1	YDR086C	SYS1	P41544	203 aa		0.64	□□□□□ -2.31
SSS1	YDR086C	YFL064C	P43540	174 aa		0.64	□□□□□ -2.31
SSS1	YDR086C	PIR5	P46999	287 aa		0.64	□□□□□ -2.31
SSS1	YDR086C	YJL055W	P47044	245 aa		0.64	□□□□□ -2.31
SSS1	YDR086C	YJR146W	P47174	117 aa		0.64	□□□□□ -2.31
SSS1	YDR086C	YML6	P51998	286 aa		0.64	□□□□□ -2.31
SSS1	YDR086C	COS6	P53344	381 aa		0.64	□□□□□ -2.31
SSS1	YDR086C	RPL6A	Q02326	176 aa	Known RBP	0.64	□□□□□ -2.31
SSS1	YDR086C	YMR310C	Q04867	317 aa	Predicted RBP	0.64	□□□□□ -2.31
SSS1	YDR086C	YLR012C	Q07927	99 aa		0.64	□□□□□ -2.31
SSS1	YDR086C	GLE1	Q12315	538 aa		0.64	□□□□□ -2.31
SSS1	YDR086C	YHR086W-A	Q3E746	53 aa		0.64	□□□□□ -2.31
SSS1	YDR086C	MYO3	P36006	1272 aa		0.63	□□□□□ -2.31
SSS1	YDR086C	IML3	P38265	245 aa		0.63	□□□□□ -2.31
SSS1	YDR086C	MRPL49	P40858	161 aa	Predicted RBP	0.63	□□□□□ -2.31
SSS1	YDR086C	MND1	P53102	219 aa		0.63	□□□□□ -2.31
SSS1	YDR086C	SUB1	P54000	292 aa	Known RBP	0.63	□□□□□ -2.31
SSS1	YDR086C	TVP15	Q03860	143 aa		0.63	□□□□□ -2.31
SSS1	YDR086C	SEC13	Q04491	297 aa	Known RBP	0.63	□□□□□ -2.31
SSS1	YDR086C	NNT1	Q05874	261 aa		0.63	□□□□□ -2.31
SSS1	YDR086C	YOR292C	Q08743	309 aa		0.63	□□□□□ -2.31
SSS1	YDR086C	DCP1	Q12517	231 aa	Predicted RBP	0.63	□□□□□ -2.31
SSS1	YDR086C	SMC6	Q12749	1114 aa		0.63	□□□□□ -2.31
SSS1	YDR086C	BOL1	Q3E793	110 aa		0.63	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 34.7 ms