RNA–Protein interactions for RNA: YDR027C

VPS54, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS54, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS54YDR027C MPP10P47083 593 aaKnown RBP1.22□□□□□ -2.21
VPS54YDR027C RIB4P50861 169 aaPredicted RBP1.22□□□□□ -2.21
VPS54YDR027C LIF1P53150 421 aa1.22□□□□□ -2.21
VPS54YDR027C YMR102CQ03177 834 aa1.22□□□□□ -2.21
VPS54YDR027C CAB5Q03941 241 aa1.22□□□□□ -2.21
VPS54YDR027C YMR111CQ04461 462 aaPredicted RBP1.22□□□□□ -2.21
VPS54YDR027C CSM3Q04659 317 aa1.22□□□□□ -2.21
VPS54YDR027C YOL075CQ08234 1294 aa1.22□□□□□ -2.21
VPS54YDR027C FDH1Q08911 376 aa1.22□□□□□ -2.21
VPS54YDR027C YDR262WQ12331 272 aa1.22□□□□□ -2.21
VPS54YDR027C IKI3Q06706 1349 aaKnown RBP1.22□□□□□ -2.21
VPS54YDR027C MSI1P13712 422 aa1.22□□□□□ -2.21
VPS54YDR027C MRPL8P22353 238 aa1.22□□□□□ -2.21
VPS54YDR027C PET18P25362 215 aa1.22□□□□□ -2.21
VPS54YDR027C RIB7P33312 244 aa1.22□□□□□ -2.21
VPS54YDR027C BUD2P33314 1104 aa1.22□□□□□ -2.21
VPS54YDR027C MYO3P36006 1272 aa1.22□□□□□ -2.21
VPS54YDR027C YKL162CP36052 402 aa1.22□□□□□ -2.21
VPS54YDR027C ECM8P38246 354 aa1.22□□□□□ -2.21
VPS54YDR027C PEX32P38292 413 aa1.22□□□□□ -2.21
VPS54YDR027C KEG1P43614 200 aa1.22□□□□□ -2.21
VPS54YDR027C AIM24P47127 394 aa1.22□□□□□ -2.21
VPS54YDR027C NAS6P50086 228 aa1.22□□□□□ -2.21
VPS54YDR027C LST7P53237 242 aa1.22□□□□□ -2.21
VPS54YDR027C MTQ1P53944 314 aa1.22□□□□□ -2.21
VPS54YDR027C VHS1Q03785 461 aa1.22□□□□□ -2.21
VPS54YDR027C PRM6Q04705 352 aa1.22□□□□□ -2.21
VPS54YDR027C RTN1Q04947 295 aaKnown RBP1.22□□□□□ -2.21
VPS54YDR027C YHC1Q05900 231 aaKnown RBP1.22□□□□□ -2.21
VPS54YDR027C BUR2Q05949 395 aa1.22□□□□□ -2.21
VPS54YDR027C RIF2Q06208 395 aa1.22□□□□□ -2.21
VPS54YDR027C YPR091CQ06833 770 aa1.22□□□□□ -2.21
VPS54YDR027C NDE2Q07500 545 aa1.22□□□□□ -2.21
VPS54YDR027C IRC25Q07951 179 aa1.22□□□□□ -2.21
VPS54YDR027C PLP2Q12017 286 aa1.22□□□□□ -2.21
VPS54YDR027C YGK3Q12222 375 aaPredicted RBP1.22□□□□□ -2.21
VPS54YDR027C PFK27Q12471 397 aaPredicted RBP1.22□□□□□ -2.21
VPS54YDR027C PCL9Q12477 304 aa1.22□□□□□ -2.21
VPS54YDR027C RRP36Q12481 300 aaPredicted RBP1.22□□□□□ -2.21
VPS54YDR027C RGS2Q99188 309 aa1.22□□□□□ -2.21
VPS54YDR027C PIS1P06197 220 aaKnown RBP1.22□□□□□ -2.21
VPS54YDR027C RPL18AP0CX49 186 aaKnown RBP1.22□□□□□ -2.21
VPS54YDR027C RPL18BP0CX50 186 aaKnown RBP1.22□□□□□ -2.21
VPS54YDR027C DAL80P26343 269 aa1.22□□□□□ -2.21
VPS54YDR027C FUN26P31381 517 aa1.22□□□□□ -2.21
VPS54YDR027C NUP2P32499 720 aa1.22□□□□□ -2.21
VPS54YDR027C RAD5P32849 1169 aaPredicted RBP1.22□□□□□ -2.21
VPS54YDR027C IML3P38265 245 aa1.22□□□□□ -2.21
VPS54YDR027C YHR182WP38870 785 aa1.22□□□□□ -2.21
VPS54YDR027C FET3P38993 636 aa1.22□□□□□ -2.21
VPS54YDR027C RTT105P40063 208 aa1.22□□□□□ -2.21
VPS54YDR027C YMR134WP40207 237 aa1.22□□□□□ -2.21
VPS54YDR027C BTT1P40314 149 aaPredicted RBP1.22□□□□□ -2.21
VPS54YDR027C CIN2P46670 268 aa1.22□□□□□ -2.21
VPS54YDR027C AIP1P46680 615 aaKnown RBP1.22□□□□□ -2.21
VPS54YDR027C YJR030CP47101 745 aa1.22□□□□□ -2.21
VPS54YDR027C TRF5P48561 642 aaKnown RBP1.22□□□□□ -2.21
VPS54YDR027C BNS1P50084 137 aa1.22□□□□□ -2.21
VPS54YDR027C YGL185CP53100 379 aa1.22□□□□□ -2.21
VPS54YDR027C LSG1P53145 640 aaKnown RBP1.22□□□□□ -2.21
VPS54YDR027C MST27P53176 234 aa1.22□□□□□ -2.21
VPS54YDR027C PNC1P53184 216 aaKnown RBP1.22□□□□□ -2.21
VPS54YDR027C ARP5P53946 755 aa1.22□□□□□ -2.21
VPS54YDR027C ECM18Q04623 453 aa1.22□□□□□ -2.21
VPS54YDR027C SMC5Q08204 1093 aa1.22□□□□□ -2.21
VPS54YDR027C IES4Q08561 116 aa1.22□□□□□ -2.21
VPS54YDR027C FCY22Q12119 530 aa1.22□□□□□ -2.21
VPS54YDR027C YDL199CQ12407 687 aa1.22□□□□□ -2.21
VPS54YDR027C IZH2Q12442 317 aa1.22□□□□□ -2.21
VPS54YDR027C MRPL23Q12487 163 aaPredicted RBP1.22□□□□□ -2.21
VPS54YDR027C YIL046W-AQ3E7Z4 54 aa1.22□□□□□ -2.21
VPS54YDR027C MKK1P32490 508 aa1.21□□□□□ -2.22
VPS54YDR027C CSE1P33307 960 aa1.21□□□□□ -2.22
VPS54YDR027C DTR1P38125 572 aa1.21□□□□□ -2.22
VPS54YDR027C BAT1P38891 393 aaKnown RBP1.21□□□□□ -2.22
VPS54YDR027C DSE1P40077 573 aa1.21□□□□□ -2.22
VPS54YDR027C LOC1P43586 204 aaPredicted RBP1.21□□□□□ -2.22
VPS54YDR027C YGR168CP53293 376 aa1.21□□□□□ -2.22
VPS54YDR027C RRG8Q06109 277 aa1.21□□□□□ -2.22
VPS54YDR027C VAC14Q06708 880 aa1.21□□□□□ -2.22
VPS54YDR027C MCT1Q12283 360 aa1.21□□□□□ -2.22
VPS54YDR027C PAA1Q12447 191 aaKnown RBP1.21□□□□□ -2.22
VPS54YDR027C BI3Q9ZZW7 517 aa1.21□□□□□ -2.22
VPS54YDR027C CAR2P07991 424 aaKnown RBP1.21□□□□□ -2.22
VPS54YDR027C GAL7P08431 366 aa1.21□□□□□ -2.22
VPS54YDR027C RPL4AP10664 362 aaKnown RBP1.21□□□□□ -2.22
VPS54YDR027C ARF2P19146 181 aaKnown RBP1.21□□□□□ -2.22
VPS54YDR027C ANR2P36090 516 aaPredicted RBP1.21□□□□□ -2.22
VPS54YDR027C SMF2P38778 549 aa1.21□□□□□ -2.22
VPS54YDR027C RBG1P39729 369 aa1.21□□□□□ -2.22
VPS54YDR027C MAM33P40513 266 aa1.21□□□□□ -2.22
VPS54YDR027C GAB1P41733 394 aa1.21□□□□□ -2.22
VPS54YDR027C ATG18P43601 500 aa1.21□□□□□ -2.22
VPS54YDR027C BIR1P47134 954 aa1.21□□□□□ -2.22
VPS54YDR027C RPL4BP49626 362 aaKnown RBP1.21□□□□□ -2.22
VPS54YDR027C CRH1P53301 507 aa1.21□□□□□ -2.22
VPS54YDR027C PXR1P53335 271 aaPredicted RBP1.21□□□□□ -2.22
VPS54YDR027C REX2P54964 269 aaKnown RBP1.21□□□□□ -2.22
VPS54YDR027C RSM10Q03201 203 aa1.21□□□□□ -2.22
VPS54YDR027C LOT6Q07923 191 aa1.21□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 38.8 ms