RNA–Protein interactions for RNA: YBR293W

VBA2, Transcript of Permease of basic amino acids in the vacuolar membrane, yeast

Gene VBA2, Length 1,425 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VBA2	YBR293W	ALY1	P36117	915 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	MRPL4	P36517	319 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	MRPL28	P36527	147 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	SDH4	P37298	181 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	YBR284W	P38150	797 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	RRN10	P38204	145 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	POA1	P38218	177 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	MDM31	P38880	579 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	PRM9	P39551	298 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	GCV3	P39726	170 aa	Predicted RBP	4.17	□□□□□ -1.74
VBA2	YBR293W	GDI1	P39958	451 aa	Known RBP	4.17	□□□□□ -1.74
VBA2	YBR293W	VAB2	P40003	282 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	FAU1	P40099	211 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	PRE6	P40303	254 aa	Known RBP	4.17	□□□□□ -1.74
VBA2	YBR293W	ARF3	P40994	183 aa	RIP-Chip data	4.17	□□□□□ -1.74	not detected
VBA2	YBR293W	VMA21	P41806	77 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	NET1	P47035	1189 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	YGL185C	P53100	379 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	SSU72	P53538	206 aa	Predicted RBP	4.17	□□□□□ -1.74
VBA2	YBR293W	TGL2	P54857	326 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	SAE3	P89114	91 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	YDC1	Q02896	317 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	GIP3	Q03016	1276 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	MSC1	Q03104	513 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	PLB2	Q03674	706 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	VBA1	Q04301	562 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	SKG3	Q06315	1026 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	MFG1	Q07684	458 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	SDO1	Q07953	250 aa	Known RBP	4.17	□□□□□ -1.74
VBA2	YBR293W	FDH1	Q08911	376 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	SIA1	Q12212	622 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	MRX4	Q12467	430 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	RIF1	P29539	1916 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	RPL9A	P05738	191 aa	Known RBP	4.16	□□□□□ -1.74
VBA2	YBR293W	PUT4	P15380	627 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	RRP7	P25368	297 aa	Predicted RBP	4.16	□□□□□ -1.74
VBA2	YBR293W	NFS1	P25374	497 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	PER1	P25625	357 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	EHD3	P28817	500 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	MRP20	P32387	263 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	STE14	P32584	239 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	MTC2	P34246	357 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	TSA1	P34760	196 aa	Known RBP	4.16	□□□□□ -1.74
VBA2	YBR293W	CTF13	P35203	478 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	DOA1	P36037	715 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	SRO77	P38163	1010 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	RTC2	P38279	296 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	YHR033W	P38690	423 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	PHO90	P39535	881 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	RRG9	P40156	214 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	GAT2	P40209	560 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	PKP1	P40530	394 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	GPP1	P41277	250 aa	Known RBP	4.16	□□□□□ -1.74
VBA2	YBR293W	HXT14	P42833	540 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	LOC1	P43586	204 aa	Predicted RBP	4.16	□□□□□ -1.74
VBA2	YBR293W	IRC7	P43623	340 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	BIT61	P47041	543 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	YJR056C	P47115	236 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	HMS2	P47175	358 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	NUP57	P48837	541 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	RPL9B	P51401	191 aa	Known RBP	4.16	□□□□□ -1.74
VBA2	YBR293W	SDT1	P53078	280 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	YGL101W	P53144	215 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	YGR017W	P53210	297 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	YGR042W	P53227	271 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	SYF2	P53277	215 aa	Predicted RBP	4.16	□□□□□ -1.74
VBA2	YBR293W	LSB1	P53281	241 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	COQ6	P53318	479 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	SAY1	P53324	424 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	FMP41	P53889	259 aa	Known RBP	4.16	□□□□□ -1.74
VBA2	YBR293W	CTL1	Q03220	320 aa	Known RBP	4.16	□□□□□ -1.74
VBA2	YBR293W	ATC1	Q04005	294 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	RTN1	Q04947	295 aa	Known RBP	4.16	□□□□□ -1.74
VBA2	YBR293W	DUS4	Q06063	367 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	YLR446W	Q06204	433 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	MRI1	Q06489	411 aa	Known RBP	4.16	□□□□□ -1.74
VBA2	YBR293W	AIM6	Q07716	390 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	MDY2	Q12285	212 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	YOP1	Q12402	180 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	YPL247C	Q12523	523 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	YKL018C-A	Q3E7A7	99 aa		4.16	□□□□□ -1.74
VBA2	YBR293W	ADH2	P00331	348 aa	Known RBP	4.15	□□□□□ -1.74
VBA2	YBR293W	SIR2	P06700	562 aa		4.15	□□□□□ -1.74
VBA2	YBR293W	ADH3	P07246	375 aa	Known RBP	4.15	□□□□□ -1.74
VBA2	YBR293W	SAM1	P10659	382 aa	Known RBP	4.15	□□□□□ -1.74
VBA2	YBR293W	SST2	P11972	698 aa	Known RBP	4.15	□□□□□ -1.74
VBA2	YBR293W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.74	not detected
VBA2	YBR293W	ERD2	P18414	219 aa		4.15	□□□□□ -1.74
VBA2	YBR293W	GAC1	P28006	793 aa		4.15	□□□□□ -1.74
VBA2	YBR293W	LAC1	P28496	418 aa		4.15	□□□□□ -1.74
VBA2	YBR293W	SOF1	P33750	489 aa	Known RBP	4.15	□□□□□ -1.74
VBA2	YBR293W	ADD66	P36040	267 aa		4.15	□□□□□ -1.74
VBA2	YBR293W	GMH1	P36125	273 aa		4.15	□□□□□ -1.74
VBA2	YBR293W	HMT1	P38074	348 aa		4.15	□□□□□ -1.74
VBA2	YBR293W	POP8	P38208	133 aa		4.15	□□□□□ -1.74
VBA2	YBR293W	EHT1	P38295	451 aa		4.15	□□□□□ -1.74
VBA2	YBR293W	YPT31	P38555	223 aa	Known RBP	4.15	□□□□□ -1.74
VBA2	YBR293W	LRP1	P38801	184 aa	Known RBP	4.15	□□□□□ -1.74
VBA2	YBR293W	CHS7	P38843	316 aa		4.15	□□□□□ -1.74
VBA2	YBR293W	SUR2	P38992	349 aa		4.15	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 73.3 ms