RNA–Protein interactions for RNA: YBR201W

DER1, Transcript of ER membrane protein that promotes export of misfolded polypeptides, yeast

Gene DER1, Length 636 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DER1	YBR201W	IES5	P40060	125 aa		3.36	□□□□□ -1.87
DER1	YBR201W	HOC1	P47124	396 aa		3.36	□□□□□ -1.87
DER1	YBR201W	EFM3	P47163	339 aa		3.36	□□□□□ -1.87
DER1	YBR201W	SYF2	P53277	215 aa	Predicted RBP	3.36	□□□□□ -1.87
DER1	YBR201W	YNL092W	P53934	400 aa		3.36	□□□□□ -1.87
DER1	YBR201W	COG5	P53951	403 aa		3.36	□□□□□ -1.87
DER1	YBR201W	NUP49	Q02199	472 aa		3.36	□□□□□ -1.87
DER1	YBR201W	SNZ1	Q03148	297 aa		3.36	□□□□□ -1.87
DER1	YBR201W	PLM2	Q04383	521 aa		3.36	□□□□□ -1.87
DER1	YBR201W	MGR3	Q04472	501 aa		3.36	□□□□□ -1.87
DER1	YBR201W	NAT4	Q04751	285 aa		3.36	□□□□□ -1.87
DER1	YBR201W	YMR310C	Q04867	317 aa	Predicted RBP	3.36	□□□□□ -1.87
DER1	YBR201W	RNH202	Q05635	350 aa		3.36	□□□□□ -1.87
DER1	YBR201W	YLR345W	Q06137	509 aa		3.36	□□□□□ -1.87
DER1	YBR201W	CYK3	Q07533	885 aa		3.36	□□□□□ -1.87
DER1	YBR201W	YOR389W	Q08912	624 aa		3.36	□□□□□ -1.87
DER1	YBR201W	LEU9	Q12166	604 aa	Known RBP	3.36	□□□□□ -1.87
DER1	YBR201W	NFI1	Q12216	726 aa		3.36	□□□□□ -1.87
DER1	YBR201W	YGK3	Q12222	375 aa	Predicted RBP	3.36	□□□□□ -1.87
DER1	YBR201W	TRM10	Q12400	293 aa		3.36	□□□□□ -1.87
DER1	YBR201W	IDP1	P21954	428 aa	Known RBP	3.35	□□□□□ -1.87
DER1	YBR201W	CHA1	P25379	360 aa	Known RBP	3.35	□□□□□ -1.87
DER1	YBR201W	CWP1	P28319	239 aa		3.35	□□□□□ -1.87
DER1	YBR201W	ITR2	P30606	609 aa		3.35	□□□□□ -1.87
DER1	YBR201W	PRE2	P30656	287 aa	Known RBP	3.35	□□□□□ -1.87
DER1	YBR201W	ASF2	P32448	525 aa	Predicted RBP	3.35	□□□□□ -1.87
DER1	YBR201W	UTP11	P34247	250 aa	Predicted RBP	3.35	□□□□□ -1.87
DER1	YBR201W	TPO5	P36029	618 aa		3.35	□□□□□ -1.87
DER1	YBR201W	VPS51	P36116	164 aa		3.35	□□□□□ -1.87
DER1	YBR201W	RPS20	P38701	121 aa	Known RBP	3.35	□□□□□ -1.87
DER1	YBR201W	ECM34	P38728	170 aa		3.35	□□□□□ -1.87
DER1	YBR201W	GDI1	P39958	451 aa	Known RBP	3.35	□□□□□ -1.87
DER1	YBR201W	ISC1	P40015	477 aa	Known RBP	3.35	□□□□□ -1.87
DER1	YBR201W	RRG9	P40156	214 aa		3.35	□□□□□ -1.87
DER1	YBR201W	PRE6	P40303	254 aa	Known RBP	3.35	□□□□□ -1.87
DER1	YBR201W	CFD1	P40558	293 aa		3.35	□□□□□ -1.87
DER1	YBR201W	IRC7	P43623	340 aa		3.35	□□□□□ -1.87
DER1	YBR201W	HMS2	P47175	358 aa		3.35	□□□□□ -1.87
DER1	YBR201W	NUP57	P48837	541 aa		3.35	□□□□□ -1.87
DER1	YBR201W	MEP3	P53390	489 aa		3.35	□□□□□ -1.87
DER1	YBR201W	COS1	P53822	381 aa		3.35	□□□□□ -1.87
DER1	YBR201W	ASI1	P54074	624 aa		3.35	□□□□□ -1.87
DER1	YBR201W	YPL068C	Q02749	293 aa		3.35	□□□□□ -1.87
DER1	YBR201W	SRL4	Q03085	281 aa		3.35	□□□□□ -1.87
DER1	YBR201W	CTL1	Q03220	320 aa	Known RBP	3.35	□□□□□ -1.87
DER1	YBR201W	RSF1	Q05043	376 aa		3.35	□□□□□ -1.87
DER1	YBR201W	BNA5	Q05979	453 aa		3.35	□□□□□ -1.87
DER1	YBR201W	FMP45	Q07651	309 aa		3.35	□□□□□ -1.87
DER1	YBR201W	GSH2	Q08220	491 aa		3.35	□□□□□ -1.87
DER1	YBR201W	BSC1	Q12140	328 aa		3.35	□□□□□ -1.87
DER1	YBR201W	MSH5	Q12175	901 aa		3.35	□□□□□ -1.87
DER1	YBR201W	FRE7	Q12333	620 aa		3.35	□□□□□ -1.87
DER1	YBR201W	RKM5	Q12367	367 aa		3.35	□□□□□ -1.87
DER1	YBR201W	YPL119C-A	Q3E751	87 aa		3.35	□□□□□ -1.87
DER1	YBR201W	TOR2	P32600	2474 aa	Known RBP	3.34	□□□□□ -1.87
DER1	YBR201W	ACC1	Q00955	2233 aa	Known RBP	3.34	□□□□□ -1.87
DER1	YBR201W	REP1	P03871	373 aa		3.34	□□□□□ -1.87
DER1	YBR201W	MET2	P08465	486 aa		3.34	□□□□□ -1.87
DER1	YBR201W	YOL163W	P0CF20	169 aa		3.34	□□□□□ -1.87
DER1	YBR201W	RPL1A	P0CX43	217 aa	Known RBP	3.34	□□□□□ -1.87
DER1	YBR201W	RPL1B	P0CX44	217 aa	Known RBP	3.34	□□□□□ -1.87
DER1	YBR201W	TFS1	P14306	219 aa		3.34	□□□□□ -1.87
DER1	YBR201W	SNF6	P18888	332 aa		3.34	□□□□□ -1.87
DER1	YBR201W	RPL24B	P24000	155 aa	Known RBP	3.34	□□□□□ -1.87
DER1	YBR201W	OAC1	P32332	324 aa		3.34	□□□□□ -1.87
DER1	YBR201W	SSH4	P32343	579 aa		3.34	□□□□□ -1.87
DER1	YBR201W	SIP1	P32578	815 aa		3.34	□□□□□ -1.87
DER1	YBR201W	YBR139W	P38109	508 aa		3.34	□□□□□ -1.87
DER1	YBR201W	FES1	P38260	290 aa		3.34	□□□□□ -1.87
DER1	YBR201W	ARN2	P38724	620 aa		3.34	□□□□□ -1.87
DER1	YBR201W	RCY1	P39531	840 aa		3.34	□□□□□ -1.87
DER1	YBR201W	PRP39	P39682	629 aa	Known RBP	3.34	□□□□□ -1.87
DER1	YBR201W	FET5	P43561	622 aa		3.34	□□□□□ -1.87
DER1	YBR201W	ALK1	P43633	760 aa	Known RBP	3.34	□□□□□ -1.87
DER1	YBR201W	JHD2	P47156	728 aa	Predicted RBP	3.34	□□□□□ -1.87
DER1	YBR201W	AAD10	P47182	288 aa		3.34	□□□□□ -1.87
DER1	YBR201W	TRM9	P49957	279 aa		3.34	□□□□□ -1.87
DER1	YBR201W	TOS2	P50078	622 aa		3.34	□□□□□ -1.87
DER1	YBR201W	MPC1	P53157	130 aa	Known RBP	3.34	□□□□□ -1.87
DER1	YBR201W	NQM1	P53228	333 aa	Predicted RBP	3.34	□□□□□ -1.87
DER1	YBR201W	DBP6	P53734	629 aa	Known RBP	3.34	□□□□□ -1.87
DER1	YBR201W	ACS1	Q01574	713 aa		3.34	□□□□□ -1.87
DER1	YBR201W	YSA1	Q01976	231 aa		3.34	□□□□□ -1.87
DER1	YBR201W	YPL108W	Q02872	168 aa	Predicted RBP	3.34	□□□□□ -1.87
DER1	YBR201W	ABZ2	Q03266	374 aa		3.34	□□□□□ -1.87
DER1	YBR201W	MAK3	Q03503	176 aa		3.34	□□□□□ -1.87
DER1	YBR201W	INP1	Q03694	420 aa		3.34	□□□□□ -1.87
DER1	YBR201W	FIN1	Q03898	291 aa		3.34	□□□□□ -1.87
DER1	YBR201W	RRN11	Q04712	507 aa		3.34	□□□□□ -1.87
DER1	YBR201W	FMP42	Q04991	504 aa		3.34	□□□□□ -1.87
DER1	YBR201W	VID22	Q05934	901 aa		3.34	□□□□□ -1.87
DER1	YBR201W	STP3	Q05937	343 aa		3.34	□□□□□ -1.87
DER1	YBR201W	NEJ1	Q06148	342 aa		3.34	□□□□□ -1.87
DER1	YBR201W	YDL242W	Q07746	117 aa		3.34	□□□□□ -1.87
DER1	YBR201W	SKI7	Q08491	747 aa	Predicted RBP	3.34	□□□□□ -1.87
DER1	YBR201W	PRS5	Q12265	496 aa	Known RBP	3.34	□□□□□ -1.87
DER1	YBR201W	RBD2	Q12270	262 aa		3.34	□□□□□ -1.87
DER1	YBR201W	YDL007C-A	Q2V2Q0	85 aa		3.34	□□□□□ -1.87
DER1	YBR201W	GAL4	P04386	881 aa		3.33	□□□□□ -1.88
DER1	YBR201W	CBS1	P14066	229 aa		3.33	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms