RNA–Protein interactions for RNA: ENST00000607055.1

NECAB3-221, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 4

Gene NECAB3, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-221ENST00000607055 SRGAP1Q7Z6B7 1085 aa23.85■■□□□ 1.41
NECAB3-221ENST00000607055 IFNLR1Q8IU57 520 aaPredicted RBP23.85■■□□□ 1.41
NECAB3-221ENST00000607055 TMEM199Q8N511 208 aa23.85■■□□□ 1.41
NECAB3-221ENST00000607055 BADQ92934 168 aa23.85■■□□□ 1.41
NECAB3-221ENST00000607055 SMARCE1Q969G3 411 aa23.85■■□□□ 1.41
NECAB3-221ENST00000607055 CCDC47Q96A33 483 aaKnown RBP23.85■■□□□ 1.41
NECAB3-221ENST00000607055 NTPCRQ9BSD7 190 aaKnown RBP23.85■■□□□ 1.41
NECAB3-221ENST00000607055 NFKBIZQ9BYH8 718 aa23.85■■□□□ 1.41
NECAB3-221ENST00000607055 INO80BQ9C086 356 aaPredicted RBP23.85■■□□□ 1.41
NECAB3-221ENST00000607055 MINDY3Q9H8M7 445 aa23.85■■□□□ 1.41
NECAB3-221ENST00000607055 MRPL44Q9H9J2 332 aaKnown RBP23.85■■□□□ 1.41
NECAB3-221ENST00000607055 PCDHA5Q9Y5H7 936 aa23.85■■□□□ 1.41
NECAB3-221ENST00000607055 TANC1Q9C0D5 1861 aa23.85■■□□□ 1.41
NECAB3-221ENST00000607055 MYH11P35749 1972 aa23.85■■□□□ 1.41
NECAB3-221ENST00000607055 RPS6KA5O75582 802 aa23.84■■□□□ 1.41
NECAB3-221ENST00000607055 PARNO95453 639 aaKnown RBP23.84■■□□□ 1.41
NECAB3-221ENST00000607055 CSF2RAP15509 400 aa23.84■■□□□ 1.41
NECAB3-221ENST00000607055 NCKAP1LP55160 1127 aa23.84■■□□□ 1.41
NECAB3-221ENST00000607055 MBTD1Q05BQ5 628 aa23.84■■□□□ 1.41
NECAB3-221ENST00000607055 GPNMBQ14956 572 aa23.84■■□□□ 1.41
NECAB3-221ENST00000607055 TSHZ1Q6ZSZ6 1077 aa23.84■■□□□ 1.41
NECAB3-221ENST00000607055 DEFB128Q7Z7B8 93 aa23.84■■□□□ 1.41
NECAB3-221ENST00000607055 FIZ1Q96SL8 496 aa23.84■■□□□ 1.41
NECAB3-221ENST00000607055 AGO3Q9H9G7 860 aaKnown RBP23.84■■□□□ 1.41
NECAB3-221ENST00000607055 OLFML3Q9NRN5 406 aa23.84■■□□□ 1.41
NECAB3-221ENST00000607055 ARHGAP28Q9P2N2 729 aa23.84■■□□□ 1.41
NECAB3-221ENST00000607055 SIP14410 1827 aa23.84■■□□□ 1.41
NECAB3-221ENST00000607055 MKI67P46013 3256 aaKnown RBP23.83■■□□□ 1.41
NECAB3-221ENST00000607055 CD52P31358 61 aa23.83■■□□□ 1.41
NECAB3-221ENST00000607055 RFC2P35250 354 aa23.83■■□□□ 1.41
NECAB3-221ENST00000607055 EFNA5P52803 228 aa23.83■■□□□ 1.41
NECAB3-221ENST00000607055 EHHADHQ08426 723 aa23.83■■□□□ 1.41
NECAB3-221ENST00000607055 FAM26FQ5R3K3 315 aa23.83■■□□□ 1.41
NECAB3-221ENST00000607055 HAUS6Q7Z4H7 955 aa23.83■■□□□ 1.41
NECAB3-221ENST00000607055 FAM228AQ86W67 206 aa23.83■■□□□ 1.41
NECAB3-221ENST00000607055 TMEM161BQ8NDZ6 487 aa23.83■■□□□ 1.41
NECAB3-221ENST00000607055 SQORQ9Y6N5 450 aa23.83■■□□□ 1.41
NECAB3-221ENST00000607055 DENND3A2RUS2 1198 aa23.82■■□□□ 1.4
NECAB3-221ENST00000607055 H0YCG3 227 aa23.82■■□□□ 1.4
NECAB3-221ENST00000607055 MAPTP10636 758 aaKnown RBP23.82■■□□□ 1.4
NECAB3-221ENST00000607055 SFPQP23246 707 aaKnown RBP eCLIP23.82■■□□□ 1.4
NECAB3-221ENST00000607055 PAK2Q13177 524 aa23.82■■□□□ 1.4
NECAB3-221ENST00000607055 CATSPER4Q7RTX7 472 aa23.82■■□□□ 1.4
NECAB3-221ENST00000607055 USP38Q8NB14 1042 aa23.82■■□□□ 1.4
NECAB3-221ENST00000607055 SLC17A8Q8NDX2 589 aa23.82■■□□□ 1.4
NECAB3-221ENST00000607055 FGFBP2Q9BYJ0 223 aa23.82■■□□□ 1.4
NECAB3-221ENST00000607055 CCDC113Q9H0I3 377 aa23.82■■□□□ 1.4
NECAB3-221ENST00000607055 PHLPP2Q6ZVD8 1323 aa23.82■■□□□ 1.4
NECAB3-221ENST00000607055 K7ERI5 159 aa23.81■■□□□ 1.4
NECAB3-221ENST00000607055 GCNT3O95395 438 aa23.81■■□□□ 1.4
NECAB3-221ENST00000607055 PRKCBP05771 671 aa23.81■■□□□ 1.4
NECAB3-221ENST00000607055 MYBP10242 640 aa23.81■■□□□ 1.4
NECAB3-221ENST00000607055 FPGSQ05932 587 aa23.81■■□□□ 1.4
NECAB3-221ENST00000607055 NFX1Q12986 1120 aaKnown RBP23.81■■□□□ 1.4
NECAB3-221ENST00000607055 KCNB1Q14721 858 aa23.81■■□□□ 1.4
NECAB3-221ENST00000607055 MAPK6Q16659 721 aa23.81■■□□□ 1.4
NECAB3-221ENST00000607055 ZC2HC1CQ53FD0 456 aaPredicted RBP23.81■■□□□ 1.4
NECAB3-221ENST00000607055 ZNF720Q7Z2F6 126 aa23.81■■□□□ 1.4
NECAB3-221ENST00000607055 GLIS3Q8NEA6 775 aa23.81■■□□□ 1.4
NECAB3-221ENST00000607055 SPATA20Q8TB22 786 aa23.81■■□□□ 1.4
NECAB3-221ENST00000607055 GSDMAQ96QA5 445 aa23.81■■□□□ 1.4
NECAB3-221ENST00000607055 LBHD1Q9BQE6 289 aaPredicted RBP23.81■■□□□ 1.4
NECAB3-221ENST00000607055 IFIH1Q9BYX4 1025 aaKnown RBP23.81■■□□□ 1.4
NECAB3-221ENST00000607055 TMEM134Q9H6X4 195 aa23.81■■□□□ 1.4
NECAB3-221ENST00000607055 ERVK-5Q9HDB9 667 aa23.81■■□□□ 1.4
NECAB3-221ENST00000607055 SLC39A2Q9NP94 309 aa23.81■■□□□ 1.4
NECAB3-221ENST00000607055 RMND1Q9NWS8 449 aa23.81■■□□□ 1.4
NECAB3-221ENST00000607055 PADI3Q9ULW8 664 aa23.81■■□□□ 1.4
NECAB3-221ENST00000607055 ST3GAL5Q9UNP4 418 aa23.81■■□□□ 1.4
NECAB3-221ENST00000607055 GPR182O15218 404 aa23.8■■□□□ 1.4
NECAB3-221ENST00000607055 ERLIN2O94905 339 aa23.8■■□□□ 1.4
NECAB3-221ENST00000607055 RHOBTB3O94955 611 aa23.8■■□□□ 1.4
NECAB3-221ENST00000607055 CXCL10P02778 98 aa23.8■■□□□ 1.4
NECAB3-221ENST00000607055 SARSP49591 514 aaKnown RBP23.8■■□□□ 1.4
NECAB3-221ENST00000607055 CASP5P51878 434 aa23.8■■□□□ 1.4
NECAB3-221ENST00000607055 PSMD2Q13200 908 aa23.8■■□□□ 1.4
NECAB3-221ENST00000607055 SCN5AQ14524 2016 aa23.8■■□□□ 1.4
NECAB3-221ENST00000607055 KLHL40Q2TBA0 621 aa23.8■■□□□ 1.4
NECAB3-221ENST00000607055 CCDC183Q5T5S1 534 aa23.8■■□□□ 1.4
NECAB3-221ENST00000607055 CAVIN1Q6NZI2 390 aaKnown RBP23.8■■□□□ 1.4
NECAB3-221ENST00000607055 TAS1R3Q7RTX0 852 aa23.8■■□□□ 1.4
NECAB3-221ENST00000607055 FZD8Q9H461 694 aa23.8■■□□□ 1.4
NECAB3-221ENST00000607055 ST6GALNAC4Q9H4F1 302 aa23.8■■□□□ 1.4
NECAB3-221ENST00000607055 PRMT7Q9NVM4 692 aaPredicted RBP23.8■■□□□ 1.4
NECAB3-221ENST00000607055 KIAA1468Q9P260 1216 aa23.8■■□□□ 1.4
NECAB3-221ENST00000607055 STRN3Q13033 797 aa23.79■■□□□ 1.4
NECAB3-221ENST00000607055 STK4Q13043 487 aa23.79■■□□□ 1.4
NECAB3-221ENST00000607055 PPIGQ13427 754 aaKnown RBP eCLIP23.79■■□□□ 1.4
NECAB3-221ENST00000607055 SKOR2Q2VWA4 1001 aaPredicted RBP23.79■■□□□ 1.4
NECAB3-221ENST00000607055 PLEKHG4Q58EX7 1191 aa23.79■■□□□ 1.4
NECAB3-221ENST00000607055 ISM2Q6H9L7 571 aa23.79■■□□□ 1.4
NECAB3-221ENST00000607055 DBF4BQ8NFT6 615 aa23.79■■□□□ 1.4
NECAB3-221ENST00000607055 SEPT8Q92599 483 aa23.79■■□□□ 1.4
NECAB3-221ENST00000607055 TMEM63CQ9P1W3 806 aa23.79■■□□□ 1.4
NECAB3-221ENST00000607055 MAN1B1Q9UKM7 699 aa23.79■■□□□ 1.4
NECAB3-221ENST00000607055 USP20Q9Y2K6 914 aa23.79■■□□□ 1.4
NECAB3-221ENST00000607055 LTBP2Q14767 1821 aa23.79■■□□□ 1.4
NECAB3-221ENST00000607055 BIN1O00499 593 aa23.78■■□□□ 1.4
NECAB3-221ENST00000607055 B4GALT5O43286 388 aa23.78■■□□□ 1.4
NECAB3-221ENST00000607055 TSPAN1O60635 241 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms