RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 CCNE2O96020 404 aa9.84□□□□□ -0.83
SMAD4-215ENST00000592911 ARP10275 920 aa9.84□□□□□ -0.83
SMAD4-215ENST00000592911 RFX1P22670 979 aa9.84□□□□□ -0.83
SMAD4-215ENST00000592911 CLK2P49760 499 aaKnown RBP9.84□□□□□ -0.83
SMAD4-215ENST00000592911 GPC3P51654 580 aa9.84□□□□□ -0.83
SMAD4-215ENST00000592911 CLCN4P51793 760 aa9.84□□□□□ -0.83
SMAD4-215ENST00000592911 RCAN1P53805 252 aa9.84□□□□□ -0.83
SMAD4-215ENST00000592911 ANTXR2P58335 489 aa9.84□□□□□ -0.83
SMAD4-215ENST00000592911 NLRP11P59045 1033 aaKnown RBP9.84□□□□□ -0.83
SMAD4-215ENST00000592911 ARHGAP8P85298 464 aa9.84□□□□□ -0.83
SMAD4-215ENST00000592911 PTPN14Q15678 1187 aa9.84□□□□□ -0.83
SMAD4-215ENST00000592911 GLB1LQ6UWU2 654 aa9.84□□□□□ -0.83
SMAD4-215ENST00000592911 RSPO2Q6UXX9 243 aaPredicted RBP9.84□□□□□ -0.83
SMAD4-215ENST00000592911 SGMS1Q86VZ5 419 aa9.84□□□□□ -0.83
SMAD4-215ENST00000592911 CKAP2LQ8IYA6 745 aa9.84□□□□□ -0.83
SMAD4-215ENST00000592911 METTL13Q8N6R0 699 aa9.84□□□□□ -0.83
SMAD4-215ENST00000592911 CYP2W1Q8TAV3 490 aa9.84□□□□□ -0.83
SMAD4-215ENST00000592911 MAP4K1Q92918 833 aa9.84□□□□□ -0.83
SMAD4-215ENST00000592911 SECISBP2LQ93073 1101 aaKnown RBP9.84□□□□□ -0.83
SMAD4-215ENST00000592911 SHDQ96IW2 340 aa9.84□□□□□ -0.83
SMAD4-215ENST00000592911 TMEM175Q9BSA9 504 aa9.84□□□□□ -0.83
SMAD4-215ENST00000592911 ANO3Q9BYT9 981 aa9.84□□□□□ -0.83
SMAD4-215ENST00000592911 SENP2Q9HC62 589 aa9.84□□□□□ -0.83
SMAD4-215ENST00000592911 WDR6Q9NNW5 1121 aaKnown RBP9.84□□□□□ -0.83
SMAD4-215ENST00000592911 NRBP2Q9NSY0 501 aa9.84□□□□□ -0.83
SMAD4-215ENST00000592911 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.84□□□□□ -0.83
SMAD4-215ENST00000592911 PKD2L1Q9P0L9 805 aa9.84□□□□□ -0.83
SMAD4-215ENST00000592911 DAXXQ9UER7 740 aaPredicted RBP9.84□□□□□ -0.83
SMAD4-215ENST00000592911 FBXO4Q9UKT5 387 aa9.84□□□□□ -0.83
SMAD4-215ENST00000592911 LHX6Q9UPM6 363 aa9.84□□□□□ -0.83
SMAD4-215ENST00000592911 SLC12A7Q9Y666 1083 aa9.84□□□□□ -0.83
SMAD4-215ENST00000592911 FRYLO94915 3013 aa9.84□□□□□ -0.83
SMAD4-215ENST00000592911 PATJQ8NI35 1801 aa9.84□□□□□ -0.83
SMAD4-215ENST00000592911 CNTNAP2Q9UHC6 1331 aa9.83□□□□□ -0.84
SMAD4-215ENST00000592911 F5P12259 2224 aa9.83□□□□□ -0.84
SMAD4-215ENST00000592911 ESYT2A0FGR8 921 aa9.83□□□□□ -0.84
SMAD4-215ENST00000592911 WDR64B1ANS9 1081 aa9.83□□□□□ -0.84
SMAD4-215ENST00000592911 SH2B2O14492 632 aaPredicted RBP9.83□□□□□ -0.84
SMAD4-215ENST00000592911 PI15O43692 258 aa9.83□□□□□ -0.84
SMAD4-215ENST00000592911 KINO60870 393 aaKnown RBP9.83□□□□□ -0.84
SMAD4-215ENST00000592911 ADH1AP07327 375 aa9.83□□□□□ -0.84
SMAD4-215ENST00000592911 GALTP07902 379 aa9.83□□□□□ -0.84
SMAD4-215ENST00000592911 EPCAMP16422 314 aa9.83□□□□□ -0.84
SMAD4-215ENST00000592911 ATP4AP20648 1035 aa9.83□□□□□ -0.84
SMAD4-215ENST00000592911 SFPQP23246 707 aaKnown RBP eCLIP9.83□□□□□ -0.84
SMAD4-215ENST00000592911 ZNF76P36508 570 aa9.83□□□□□ -0.84
SMAD4-215ENST00000592911 MLLT3P42568 568 aaPredicted RBP9.83□□□□□ -0.84
SMAD4-215ENST00000592911 PHKA2P46019 1235 aa9.83□□□□□ -0.84
SMAD4-215ENST00000592911 ADCY7P51828 1080 aa9.83□□□□□ -0.84
SMAD4-215ENST00000592911 UBE2SQ16763 222 aa9.83□□□□□ -0.84
SMAD4-215ENST00000592911 DIEXFQ68CQ4 756 aaKnown RBP9.83□□□□□ -0.84
SMAD4-215ENST00000592911 SWSAP1Q6NVH7 229 aa9.83□□□□□ -0.84
SMAD4-215ENST00000592911 TMC5Q6UXY8 1006 aa9.83□□□□□ -0.84
SMAD4-215ENST00000592911 HEATR3Q7Z4Q2 680 aa9.83□□□□□ -0.84
SMAD4-215ENST00000592911 ZNF410Q86VK4 478 aa9.83□□□□□ -0.84
SMAD4-215ENST00000592911 C1orf210Q8IVY1 113 aa9.83□□□□□ -0.84
SMAD4-215ENST00000592911 FANCBQ8NB91 859 aa9.83□□□□□ -0.84
SMAD4-215ENST00000592911 RDM1Q8NG50 284 aa9.83□□□□□ -0.84
SMAD4-215ENST00000592911 CRYGNQ8WXF5 182 aa9.83□□□□□ -0.84
SMAD4-215ENST00000592911 PIBF1Q8WXW3 757 aa9.83□□□□□ -0.84
SMAD4-215ENST00000592911 PGBD4Q96DM1 585 aa9.83□□□□□ -0.84
SMAD4-215ENST00000592911 GCOM2Q9BZD3 368 aaPredicted RBP9.83□□□□□ -0.84
SMAD4-215ENST00000592911 PLEKHA4Q9H4M7 779 aa9.83□□□□□ -0.84
SMAD4-215ENST00000592911 MRPL17Q9NRX2 175 aaKnown RBP9.83□□□□□ -0.84
SMAD4-215ENST00000592911 DLGAP2Q9P1A6 1054 aa9.83□□□□□ -0.84
SMAD4-215ENST00000592911 AKT3Q9Y243 479 aa9.83□□□□□ -0.84
SMAD4-215ENST00000592911 SIT1Q9Y3P8 196 aa9.83□□□□□ -0.84
SMAD4-215ENST00000592911 PCDHGA2Q9Y5H1 932 aa9.83□□□□□ -0.84
SMAD4-215ENST00000592911 CACNA1GO43497 2377 aa9.83□□□□□ -0.84
SMAD4-215ENST00000592911 IGLV3-22A0A075B6J6 115 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 RBAK-RBAKDNI3L0D1 243 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 LILRB3O75022 631 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 ZC3H11AO75152 810 aaKnown RBP eCLIP9.82□□□□□ -0.84
SMAD4-215ENST00000592911 PLEKHA8P1O95397 391 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 VTNP04004 478 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 SP9P0CG40 484 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 SFNP31947 248 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 CIITAP33076 1130 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 METAP2P50579 478 aaKnown RBP eCLIP9.82□□□□□ -0.84
SMAD4-215ENST00000592911 NAPAP54920 295 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 STARD6P59095 220 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 CREMQ03060 361 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 LMNB2Q03252 620 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 NBR1Q14596 966 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 PCBP1Q15365 356 aaKnown RBP eCLIP9.82□□□□□ -0.84
SMAD4-215ENST00000592911 NOMO2Q5JPE7 1267 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 KIAA0319Q5VV43 1072 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 EFCAB12Q6NXP0 572 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 SYNE3Q6ZMZ3 975 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 NFXL1Q6ZNB6 911 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 PLA2G4DQ86XP0 818 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 EXOC8Q8IYI6 725 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 SUMF1Q8NBK3 374 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 URGCPQ8TCY9 931 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 HELQQ8TDG4 1101 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 CCDC12Q8WUD4 166 aaPredicted RBP9.82□□□□□ -0.84
SMAD4-215ENST00000592911 DDX12PQ92771 950 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 KLHL5Q96PQ7 755 aa9.82□□□□□ -0.84
SMAD4-215ENST00000592911 JPH2Q9BR39 696 aaPredicted RBP9.82□□□□□ -0.84
SMAD4-215ENST00000592911 FAM126AQ9BYI3 521 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms