RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 RPA1P27694 616 aa25.64■■□□□ 1.7
CLDND1-230ENST00000514537 FXR2P51116 673 aaKnown RBP eCLIP25.64■■□□□ 1.7
CLDND1-230ENST00000514537 RAB27AP51159 221 aa25.64■■□□□ 1.7
CLDND1-230ENST00000514537 PTENP60484 403 aa25.64■■□□□ 1.7
CLDND1-230ENST00000514537 CTC1Q2NKJ3 1217 aa25.64■■□□□ 1.7
CLDND1-230ENST00000514537 THNSL1Q8IYQ7 743 aa25.64■■□□□ 1.7
CLDND1-230ENST00000514537 ERMNQ8TAM6 284 aa25.64■■□□□ 1.7
CLDND1-230ENST00000514537 HELQQ8TDG4 1101 aa25.64■■□□□ 1.7
CLDND1-230ENST00000514537 NACC1Q96RE7 527 aa25.64■■□□□ 1.7
CLDND1-230ENST00000514537 DBR1Q9UK59 544 aaKnown RBP25.64■■□□□ 1.7
CLDND1-230ENST00000514537 PLCB3Q01970 1234 aa25.63■■□□□ 1.69
CLDND1-230ENST00000514537 TFDP1Q14186 410 aa25.63■■□□□ 1.69
CLDND1-230ENST00000514537 PCBP1Q15365 356 aaKnown RBP eCLIP25.63■■□□□ 1.69
CLDND1-230ENST00000514537 IFNLR1Q8IU57 520 aaPredicted RBP25.63■■□□□ 1.69
CLDND1-230ENST00000514537 ASAP3Q8TDY4 903 aa25.63■■□□□ 1.69
CLDND1-230ENST00000514537 RSPH1Q8WYR4 309 aa25.63■■□□□ 1.69
CLDND1-230ENST00000514537 CLDND1Q9NY35 253 aa25.63■■□□□ 1.69
CLDND1-230ENST00000514537 PCDHB6Q9Y5E3 794 aa25.63■■□□□ 1.69
CLDND1-230ENST00000514537 GJB2P29033 226 aa25.62■■□□□ 1.69
CLDND1-230ENST00000514537 LTBRP36941 435 aa25.62■■□□□ 1.69
CLDND1-230ENST00000514537 PTGDRQ13258 359 aa25.62■■□□□ 1.69
CLDND1-230ENST00000514537 KCNT2Q6UVM3 1135 aa25.62■■□□□ 1.69
CLDND1-230ENST00000514537 LPPQ93052 612 aa25.62■■□□□ 1.69
CLDND1-230ENST00000514537 PPP2R3CQ969Q6 453 aa25.62■■□□□ 1.69
CLDND1-230ENST00000514537 ZNF558Q96NG5 402 aa25.62■■□□□ 1.69
CLDND1-230ENST00000514537 MRPL9Q9BYD2 267 aaKnown RBP25.62■■□□□ 1.69
CLDND1-230ENST00000514537 KIAA1671Q9BY89 1806 aa25.62■■□□□ 1.69
CLDND1-230ENST00000514537 TCF20Q9UGU0 1960 aaKnown RBP25.62■■□□□ 1.69
CLDND1-230ENST00000514537 BDP1A6H8Y1 2624 aa25.61■■□□□ 1.69
CLDND1-230ENST00000514537 H3BQ06 376 aaPredicted RBP25.61■■□□□ 1.69
CLDND1-230ENST00000514537 USO1O60763 962 aaKnown RBP25.61■■□□□ 1.69
CLDND1-230ENST00000514537 MUTP22033 750 aa25.61■■□□□ 1.69
CLDND1-230ENST00000514537 GLRA2P23416 452 aa25.61■■□□□ 1.69
CLDND1-230ENST00000514537 GTF2F1P35269 517 aaKnown RBP eCLIP25.61■■□□□ 1.69
CLDND1-230ENST00000514537 CAPSQ13938 189 aa25.61■■□□□ 1.69
CLDND1-230ENST00000514537 PDIA5Q14554 519 aa25.61■■□□□ 1.69
CLDND1-230ENST00000514537 POTEGQ6S5H5 508 aa25.61■■□□□ 1.69
CLDND1-230ENST00000514537 EP400NLQ6ZTU2 488 aa25.61■■□□□ 1.69
CLDND1-230ENST00000514537 MRPL10Q7Z7H8 261 aaKnown RBP25.61■■□□□ 1.69
CLDND1-230ENST00000514537 ADGRD2Q7Z7M1 963 aa25.61■■□□□ 1.69
CLDND1-230ENST00000514537 TLR9Q9NR96 1032 aa25.61■■□□□ 1.69
CLDND1-230ENST00000514537 LZTS1Q9Y250 596 aa25.61■■□□□ 1.69
CLDND1-230ENST00000514537 PCDHB2Q9Y5E7 798 aa25.61■■□□□ 1.69
CLDND1-230ENST00000514537 MEIS3P2A8K0S8 358 aa25.6■■□□□ 1.69
CLDND1-230ENST00000514537 PUS10Q3MIT2 529 aaKnown RBP25.6■■□□□ 1.69
CLDND1-230ENST00000514537 LONRF3Q496Y0 759 aa25.6■■□□□ 1.69
CLDND1-230ENST00000514537 UBXN11Q5T124 520 aa25.6■■□□□ 1.69
CLDND1-230ENST00000514537 HAUS3Q68CZ6 603 aa25.6■■□□□ 1.69
CLDND1-230ENST00000514537 MCTP1Q6DN14 999 aa25.6■■□□□ 1.69
CLDND1-230ENST00000514537 MRPS27Q92552 414 aaKnown RBP25.6■■□□□ 1.69
CLDND1-230ENST00000514537 PGBD4Q96DM1 585 aa25.6■■□□□ 1.69
CLDND1-230ENST00000514537 NFKBIZQ9BYH8 718 aa25.6■■□□□ 1.69
CLDND1-230ENST00000514537 POLR3FQ9H1D9 316 aaPredicted RBP25.6■■□□□ 1.69
CLDND1-230ENST00000514537 IGFLR1Q9H665 355 aa25.6■■□□□ 1.69
CLDND1-230ENST00000514537 LRWD1Q9UFC0 647 aa25.6■■□□□ 1.69
CLDND1-230ENST00000514537 GRXCR2A6NFK2 248 aa25.59■■□□□ 1.69
CLDND1-230ENST00000514537 FSCN2O14926 492 aa25.59■■□□□ 1.69
CLDND1-230ENST00000514537 OFD1O75665 1012 aa25.59■■□□□ 1.69
CLDND1-230ENST00000514537 ERLIN2O94905 339 aa25.59■■□□□ 1.69
CLDND1-230ENST00000514537 PPM1AP35813 382 aa25.59■■□□□ 1.69
CLDND1-230ENST00000514537 PBX3P40426 434 aa25.59■■□□□ 1.69
CLDND1-230ENST00000514537 ERVFC1P60507 584 aa25.59■■□□□ 1.69
CLDND1-230ENST00000514537 ADAM15Q13444 863 aa25.59■■□□□ 1.69
CLDND1-230ENST00000514537 PTCRAQ6ISU1 281 aaPredicted RBP25.59■■□□□ 1.69
CLDND1-230ENST00000514537 GLB1LQ6UWU2 654 aa25.59■■□□□ 1.69
CLDND1-230ENST00000514537 IGSF22Q8N9C0 903 aa25.59■■□□□ 1.69
CLDND1-230ENST00000514537 MCPH1Q8NEM0 835 aa25.59■■□□□ 1.69
CLDND1-230ENST00000514537 MICAL1Q8TDZ2 1067 aa25.59■■□□□ 1.69
CLDND1-230ENST00000514537 GPRC5CQ9NQ84 441 aa25.59■■□□□ 1.69
CLDND1-230ENST00000514537 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.59■■□□□ 1.69
CLDND1-230ENST00000514537 SPG21Q9NZD8 308 aa25.59■■□□□ 1.69
CLDND1-230ENST00000514537 PUF60Q9UHX1 559 aaKnown RBP25.59■■□□□ 1.69
CLDND1-230ENST00000514537 SMC3Q9UQE7 1217 aa25.59■■□□□ 1.69
CLDND1-230ENST00000514537 PCDHGC5Q9Y5F6 944 aa25.59■■□□□ 1.69
CLDND1-230ENST00000514537 INO80B-WBP1J3KQ70 363 aa25.58■■□□□ 1.69
CLDND1-230ENST00000514537 LAD1O00515 517 aa25.58■■□□□ 1.69
CLDND1-230ENST00000514537 TSPAN1O60635 241 aa25.58■■□□□ 1.69
CLDND1-230ENST00000514537 AXLP30530 894 aa25.58■■□□□ 1.69
CLDND1-230ENST00000514537 MBTD1Q05BQ5 628 aa25.58■■□□□ 1.69
CLDND1-230ENST00000514537 DLX2Q07687 328 aaPredicted RBP25.58■■□□□ 1.69
CLDND1-230ENST00000514537 ECM1Q16610 540 aa25.58■■□□□ 1.69
CLDND1-230ENST00000514537 RILPL1Q5EBL4 403 aa25.58■■□□□ 1.69
CLDND1-230ENST00000514537 PDE12Q6L8Q7 609 aaKnown RBP25.58■■□□□ 1.69
CLDND1-230ENST00000514537 PADI6Q6TGC4 694 aa25.58■■□□□ 1.69
CLDND1-230ENST00000514537 MAEAQ7L5Y9 396 aa25.58■■□□□ 1.69
CLDND1-230ENST00000514537 SLC39A11Q8N1S5 342 aa25.58■■□□□ 1.69
CLDND1-230ENST00000514537 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.58■■□□□ 1.69
CLDND1-230ENST00000514537 H3BQV1 296 aa25.57■■□□□ 1.68
CLDND1-230ENST00000514537 LINC01565O15544 149 aa25.57■■□□□ 1.68
CLDND1-230ENST00000514537 IL9P15248 144 aa25.57■■□□□ 1.68
CLDND1-230ENST00000514537 CCT6AP40227 531 aaKnown RBP25.57■■□□□ 1.68
CLDND1-230ENST00000514537 PRPHP41219 470 aa25.57■■□□□ 1.68
CLDND1-230ENST00000514537 KRT17Q04695 432 aa25.57■■□□□ 1.68
CLDND1-230ENST00000514537 AMHR2Q16671 573 aa25.57■■□□□ 1.68
CLDND1-230ENST00000514537 NOMO2Q5JPE7 1267 aa25.57■■□□□ 1.68
CLDND1-230ENST00000514537 AGMOQ6ZNB7 445 aa25.57■■□□□ 1.68
CLDND1-230ENST00000514537 EFHBQ8N7U6 833 aa25.57■■□□□ 1.68
CLDND1-230ENST00000514537 RAB34Q9BZG1 259 aa25.57■■□□□ 1.68
CLDND1-230ENST00000514537 TBC1D13Q9NVG8 400 aa25.57■■□□□ 1.68
CLDND1-230ENST00000514537 STK24Q9Y6E0 443 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms