RNA–Protein interactions for RNA: ENST00000513042.6

ARHGEF28-212, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF28, Length 6,273 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-212ENST00000513042 VAMP7P51809 220 aa18.47■□□□□ 0.55
ARHGEF28-212ENST00000513042 AP3B2Q13367 1082 aa18.47■□□□□ 0.55
ARHGEF28-212ENST00000513042 C1orf54Q8WWF1 131 aa18.47■□□□□ 0.55
ARHGEF28-212ENST00000513042 FAM167BQ9BTA0 163 aa18.47■□□□□ 0.55
ARHGEF28-212ENST00000513042 AATKQ6ZMQ8 1374 aa18.47■□□□□ 0.55
ARHGEF28-212ENST00000513042 STXBP2Q15833 593 aa18.47■□□□□ 0.55
ARHGEF28-212ENST00000513042 RC3H1Q5TC82 1133 aaKnown RBP18.47■□□□□ 0.55
ARHGEF28-212ENST00000513042 NDUFAF2Q8N183 169 aa18.47■□□□□ 0.55
ARHGEF28-212ENST00000513042 STRIP2Q9ULQ0 834 aa18.47■□□□□ 0.55
ARHGEF28-212ENST00000513042 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.47■□□□□ 0.55
ARHGEF28-212ENST00000513042 TMEM94Q12767 1356 aa18.47■□□□□ 0.55
ARHGEF28-212ENST00000513042 NPHP3-ACAD11A0A0J9YXS1 232 aa18.47■□□□□ 0.55
ARHGEF28-212ENST00000513042 E5RI56 91 aa18.47■□□□□ 0.55
ARHGEF28-212ENST00000513042 LMNAP02545 664 aaKnown RBP18.47■□□□□ 0.55
ARHGEF28-212ENST00000513042 TBCCQ15814 346 aa18.47■□□□□ 0.55
ARHGEF28-212ENST00000513042 MDH1BQ5I0G3 518 aa18.47■□□□□ 0.55
ARHGEF28-212ENST00000513042 TWF2Q6IBS0 349 aaKnown RBP18.47■□□□□ 0.55
ARHGEF28-212ENST00000513042 SNRNP48Q6IEG0 339 aaKnown RBP18.47■□□□□ 0.55
ARHGEF28-212ENST00000513042 KDELC2Q7Z4H8 507 aa18.47■□□□□ 0.55
ARHGEF28-212ENST00000513042 DDX47Q9H0S4 455 aaKnown RBP18.47■□□□□ 0.55
ARHGEF28-212ENST00000513042 CYP2E1P05181 493 aaPredicted RBP18.47■□□□□ 0.55
ARHGEF28-212ENST00000513042 FLOT2Q14254 428 aa18.47■□□□□ 0.55
ARHGEF28-212ENST00000513042 SWSAP1Q6NVH7 229 aa18.47■□□□□ 0.55
ARHGEF28-212ENST00000513042 XXYLT1Q8NBI6 393 aa18.47■□□□□ 0.55
ARHGEF28-212ENST00000513042 ZNF507Q8TCN5 953 aa18.47■□□□□ 0.55
ARHGEF28-212ENST00000513042 POLR3FQ9H1D9 316 aaPredicted RBP18.47■□□□□ 0.55
ARHGEF28-212ENST00000513042 ERVV-1B6SEH8 477 aa18.46■□□□□ 0.55
ARHGEF28-212ENST00000513042 HUS1O60921 280 aa18.46■□□□□ 0.55
ARHGEF28-212ENST00000513042 KRT38O76015 456 aa18.46■□□□□ 0.55
ARHGEF28-212ENST00000513042 KLHL38Q2WGJ6 581 aa18.46■□□□□ 0.55
ARHGEF28-212ENST00000513042 DHX40Q8IX18 779 aaKnown RBP18.46■□□□□ 0.55
ARHGEF28-212ENST00000513042 TMEM35BQ8NCS4 154 aa18.46■□□□□ 0.55
ARHGEF28-212ENST00000513042 BRIP1Q9BX63 1249 aa18.46■□□□□ 0.55
ARHGEF28-212ENST00000513042 ALG13Q9NP73 1137 aaKnown RBP18.46■□□□□ 0.55
ARHGEF28-212ENST00000513042 KLHL11Q9NVR0 708 aa18.46■□□□□ 0.55
ARHGEF28-212ENST00000513042 HPCAL4Q9UM19 191 aa18.46■□□□□ 0.55
ARHGEF28-212ENST00000513042 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.46■□□□□ 0.55
ARHGEF28-212ENST00000513042 PYGBP11216 843 aa18.46■□□□□ 0.55
ARHGEF28-212ENST00000513042 PRDX5P30044 214 aa18.46■□□□□ 0.55
ARHGEF28-212ENST00000513042 DAB2P98082 770 aa18.46■□□□□ 0.55
ARHGEF28-212ENST00000513042 DRAP1Q14919 205 aaPredicted RBP18.46■□□□□ 0.55
ARHGEF28-212ENST00000513042 CYFIP1Q7L576 1253 aa18.46■□□□□ 0.55
ARHGEF28-212ENST00000513042 TTC8Q8TAM2 541 aa18.46■□□□□ 0.55
ARHGEF28-212ENST00000513042 FAM161BQ96MY7 647 aa18.46■□□□□ 0.55
ARHGEF28-212ENST00000513042 TDRD3Q9H7E2 651 aaKnown RBP18.46■□□□□ 0.55
ARHGEF28-212ENST00000513042 ACTN3Q08043 901 aaPredicted RBP18.46■□□□□ 0.55
ARHGEF28-212ENST00000513042 MAPK6Q16659 721 aa18.46■□□□□ 0.55
ARHGEF28-212ENST00000513042 CC2D1AQ6P1N0 951 aaPredicted RBP18.46■□□□□ 0.55
ARHGEF28-212ENST00000513042 COA1Q9GZY4 146 aa18.46■□□□□ 0.55
ARHGEF28-212ENST00000513042 DFFAO00273 331 aa18.46■□□□□ 0.55
ARHGEF28-212ENST00000513042 KRT14P02533 472 aa18.46■□□□□ 0.55
ARHGEF28-212ENST00000513042 CALB1P05937 261 aa18.46■□□□□ 0.55
ARHGEF28-212ENST00000513042 ROR1Q01973 937 aa18.46■□□□□ 0.55
ARHGEF28-212ENST00000513042 NUDCD3Q8IVD9 361 aa18.46■□□□□ 0.55
ARHGEF28-212ENST00000513042 SYNE4Q8N205 404 aa18.46■□□□□ 0.55
ARHGEF28-212ENST00000513042 PBRM1Q86U86 1689 aa18.46■□□□□ 0.55
ARHGEF28-212ENST00000513042 STK25O00506 426 aa18.46■□□□□ 0.54
ARHGEF28-212ENST00000513042 HAUS5O94927 633 aa18.46■□□□□ 0.54
ARHGEF28-212ENST00000513042 FTLP02792 175 aaPredicted RBP18.46■□□□□ 0.54
ARHGEF28-212ENST00000513042 CDC27P30260 824 aa18.46■□□□□ 0.54
ARHGEF28-212ENST00000513042 PSMC1P62191 440 aaKnown RBP18.46■□□□□ 0.54
ARHGEF28-212ENST00000513042 TNFAIP2Q03169 654 aa18.46■□□□□ 0.54
ARHGEF28-212ENST00000513042 EFTUD2Q15029 972 aaKnown RBP eCLIP18.46■□□□□ 0.547e-7■■■□□ 17.9
ARHGEF28-212ENST00000513042 NR1H4Q96RI1 486 aaPredicted RBP18.46■□□□□ 0.54
ARHGEF28-212ENST00000513042 YIPF3Q9GZM5 350 aa18.46■□□□□ 0.54
ARHGEF28-212ENST00000513042 ERVK-7P63135 1459 aa18.45■□□□□ 0.54
ARHGEF28-212ENST00000513042 CLASP1Q7Z460 1538 aa18.45■□□□□ 0.54
ARHGEF28-212ENST00000513042 PPP2R2AP63151 447 aa18.45■□□□□ 0.54
ARHGEF28-212ENST00000513042 TXNRD1Q16881 649 aa18.45■□□□□ 0.54
ARHGEF28-212ENST00000513042 GRAMD4Q6IC98 578 aa18.45■□□□□ 0.54
ARHGEF28-212ENST00000513042 SCG3Q8WXD2 468 aaKnown RBP18.45■□□□□ 0.54
ARHGEF28-212ENST00000513042 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.45■□□□□ 0.541e-7■■□□□ 13.5
ARHGEF28-212ENST00000513042 SYF2O95926 243 aaKnown RBP18.45■□□□□ 0.54
ARHGEF28-212ENST00000513042 LCP1P13796 627 aa18.45■□□□□ 0.54
ARHGEF28-212ENST00000513042 CCDC144BQ3MJ40 725 aa18.45■□□□□ 0.54
ARHGEF28-212ENST00000513042 KRT39Q6A163 491 aa18.45■□□□□ 0.54
ARHGEF28-212ENST00000513042 FOXP4Q8IVH2 680 aaPredicted RBP18.45■□□□□ 0.54
ARHGEF28-212ENST00000513042 EGFL8Q99944 293 aa18.45■□□□□ 0.54
ARHGEF28-212ENST00000513042 ZHX2Q9Y6X8 837 aa18.45■□□□□ 0.54
ARHGEF28-212ENST00000513042 UBA6A0AVT1 1052 aaPredicted RBP18.45■□□□□ 0.54
ARHGEF28-212ENST00000513042 TEX33O43247 280 aa18.45■□□□□ 0.54
ARHGEF28-212ENST00000513042 CACNB2Q08289 660 aaPredicted RBP18.45■□□□□ 0.54
ARHGEF28-212ENST00000513042 EPHA10Q5JZY3 1008 aa18.45■□□□□ 0.54
ARHGEF28-212ENST00000513042 TAS2R42Q7RTR8 314 aa18.45■□□□□ 0.54
ARHGEF28-212ENST00000513042 DDIASQ8IXT1 998 aa18.45■□□□□ 0.54
ARHGEF28-212ENST00000513042 LY9Q9HBG7 655 aa18.45■□□□□ 0.54
ARHGEF28-212ENST00000513042 FAM217BQ9NTX9 383 aaPredicted RBP18.45■□□□□ 0.54
ARHGEF28-212ENST00000513042 FGFR4P22455 802 aa18.45■□□□□ 0.54
ARHGEF28-212ENST00000513042 PHKA2P46019 1235 aa18.45■□□□□ 0.54
ARHGEF28-212ENST00000513042 KNOP1Q1ED39 458 aaKnown RBP18.45■□□□□ 0.54
ARHGEF28-212ENST00000513042 ULK4Q96C45 1275 aa18.45■□□□□ 0.54
ARHGEF28-212ENST00000513042 ZNF335Q9H4Z2 1342 aaPredicted RBP18.45■□□□□ 0.54
ARHGEF28-212ENST00000513042 GABBR1Q9UBS5 961 aa18.45■□□□□ 0.54
ARHGEF28-212ENST00000513042 FEM1BQ9UK73 627 aa18.45■□□□□ 0.54
ARHGEF28-212ENST00000513042 CFAP69A5D8W1 941 aa18.44■□□□□ 0.54
ARHGEF28-212ENST00000513042 F8W8V4 182 aa18.44■□□□□ 0.54
ARHGEF28-212ENST00000513042 HLA-DPA1P20036 260 aa18.44■□□□□ 0.54
ARHGEF28-212ENST00000513042 ERFP50548 548 aa18.44■□□□□ 0.54
ARHGEF28-212ENST00000513042 TSPY1Q01534 308 aa18.44■□□□□ 0.54
ARHGEF28-212ENST00000513042 ACCSLQ4AC99 568 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms