RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 DDX42Q86XP3 938 aaKnown RBP eCLIP5.27□□□□□ -1.57
PDLIM1P4-201ENST00000504327 WDR48Q8TAF3 677 aa5.27□□□□□ -1.57
PDLIM1P4-201ENST00000504327 FOXRED1Q96CU9 486 aaPredicted RBP5.27□□□□□ -1.57
PDLIM1P4-201ENST00000504327 MFSD3Q96ES6 412 aa5.27□□□□□ -1.57
PDLIM1P4-201ENST00000504327 SAMD11Q96NU1 681 aa5.27□□□□□ -1.57
PDLIM1P4-201ENST00000504327 LRRC37BQ96QE4 947 aa5.27□□□□□ -1.57
PDLIM1P4-201ENST00000504327 PCIF1Q9H4Z3 704 aa5.27□□□□□ -1.57
PDLIM1P4-201ENST00000504327 CAAP1Q9H8G2 361 aa5.27□□□□□ -1.57
PDLIM1P4-201ENST00000504327 CASS4Q9NQ75 786 aa5.27□□□□□ -1.57
PDLIM1P4-201ENST00000504327 FBXO10Q9UK96 956 aa5.27□□□□□ -1.57
PDLIM1P4-201ENST00000504327 HECW1Q76N89 1606 aa5.26□□□□□ -1.57
PDLIM1P4-201ENST00000504327 MAP3K4Q9Y6R4 1608 aa5.26□□□□□ -1.57
PDLIM1P4-201ENST00000504327 FAM83GA6ND36 823 aa5.26□□□□□ -1.57
PDLIM1P4-201ENST00000504327 H7C1D1 291 aa5.26□□□□□ -1.57
PDLIM1P4-201ENST00000504327 CCER2I3L3R5 266 aa5.26□□□□□ -1.57
PDLIM1P4-201ENST00000504327 SCGB1D2O95969 90 aa5.26□□□□□ -1.57
PDLIM1P4-201ENST00000504327 STAT3P40763 770 aa5.26□□□□□ -1.57
PDLIM1P4-201ENST00000504327 ALDH6A1Q02252 535 aaKnown RBP5.26□□□□□ -1.57
PDLIM1P4-201ENST00000504327 MOGSQ13724 837 aa5.26□□□□□ -1.57
PDLIM1P4-201ENST00000504327 NOLC1Q14978 699 aaKnown RBP eCLIP5.26□□□□□ -1.57
PDLIM1P4-201ENST00000504327 RNF151Q2KHN1 245 aa5.26□□□□□ -1.57
PDLIM1P4-201ENST00000504327 CREB3L3Q68CJ9 461 aa5.26□□□□□ -1.57
PDLIM1P4-201ENST00000504327 TMEM200BQ69YZ2 307 aa5.26□□□□□ -1.57
PDLIM1P4-201ENST00000504327 CHPFQ8IZ52 775 aa5.26□□□□□ -1.57
PDLIM1P4-201ENST00000504327 TTC9BQ8N6N2 239 aa5.26□□□□□ -1.57
PDLIM1P4-201ENST00000504327 KIAA1958Q8N8K9 716 aa5.26□□□□□ -1.57
PDLIM1P4-201ENST00000504327 GNRHR2Q96P88 292 aa5.26□□□□□ -1.57
PDLIM1P4-201ENST00000504327 LMF1Q96S06 567 aa5.26□□□□□ -1.57
PDLIM1P4-201ENST00000504327 B4GALT6Q9UBX8 382 aa5.26□□□□□ -1.57
PDLIM1P4-201ENST00000504327 SCINQ9Y6U3 715 aa5.26□□□□□ -1.57
PDLIM1P4-201ENST00000504327 TSPOAP1O95153 1857 aa5.26□□□□□ -1.57
PDLIM1P4-201ENST00000504327 FYCO1Q9BQS8 1478 aa5.26□□□□□ -1.57
PDLIM1P4-201ENST00000504327 A0A0G2JNJ9 132 aa5.25□□□□□ -1.57
PDLIM1P4-201ENST00000504327 PRLP01236 227 aa5.25□□□□□ -1.57
PDLIM1P4-201ENST00000504327 MYCLP1P12525 358 aaPredicted RBP5.25□□□□□ -1.57
PDLIM1P4-201ENST00000504327 FNTBP49356 437 aa5.25□□□□□ -1.57
PDLIM1P4-201ENST00000504327 STAT5BP51692 787 aa5.25□□□□□ -1.57
PDLIM1P4-201ENST00000504327 MCL1Q07820 350 aa5.25□□□□□ -1.57
PDLIM1P4-201ENST00000504327 EIF4HQ15056 248 aaKnown RBP5.25□□□□□ -1.57
PDLIM1P4-201ENST00000504327 MAPRE1Q15691 268 aaKnown RBP5.25□□□□□ -1.57
PDLIM1P4-201ENST00000504327 TBR1Q16650 682 aa5.25□□□□□ -1.57
PDLIM1P4-201ENST00000504327 GRAMD4Q6IC98 578 aa5.25□□□□□ -1.57
PDLIM1P4-201ENST00000504327 ZNF280DQ6N043 979 aa5.25□□□□□ -1.57
PDLIM1P4-201ENST00000504327 CNNM4Q6P4Q7 775 aa5.25□□□□□ -1.57
PDLIM1P4-201ENST00000504327 KSR2Q6VAB6 950 aa5.25□□□□□ -1.57
PDLIM1P4-201ENST00000504327 THNSL2Q86YJ6 484 aa5.25□□□□□ -1.57
PDLIM1P4-201ENST00000504327 CHST13Q8NET6 341 aa5.25□□□□□ -1.57
PDLIM1P4-201ENST00000504327 SVIPQ8NHG7 77 aa5.25□□□□□ -1.57
PDLIM1P4-201ENST00000504327 CALML6Q8TD86 181 aa5.25□□□□□ -1.57
PDLIM1P4-201ENST00000504327 NINJ1Q92982 152 aa5.25□□□□□ -1.57
PDLIM1P4-201ENST00000504327 NEIL1Q96FI4 390 aaPredicted RBP5.25□□□□□ -1.57
PDLIM1P4-201ENST00000504327 FOXB1Q99853 325 aa5.25□□□□□ -1.57
PDLIM1P4-201ENST00000504327 INTS7Q9NVH2 962 aaKnown RBP5.25□□□□□ -1.57
PDLIM1P4-201ENST00000504327 MAP3K20Q9NYL2 800 aaKnown RBP5.25□□□□□ -1.57
PDLIM1P4-201ENST00000504327 H2AFY2Q9P0M6 372 aaPredicted RBP5.25□□□□□ -1.57
PDLIM1P4-201ENST00000504327 Q9UFV3 132 aa5.25□□□□□ -1.57
PDLIM1P4-201ENST00000504327 ABCA9Q8IUA7 1624 aa5.25□□□□□ -1.57
PDLIM1P4-201ENST00000504327 SPATA31D1Q6ZQQ2 1576 aa5.25□□□□□ -1.57
PDLIM1P4-201ENST00000504327 HECW2Q9P2P5 1572 aa5.25□□□□□ -1.57
PDLIM1P4-201ENST00000504327 WASHC2CQ9Y4E1 1318 aa5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 MAGI3Q5TCQ9 1506 aa5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 SHTN1A0MZ66 631 aa5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 GOLGA6CA6NDK9 693 aa5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 GOLGA6BA6NDN3 693 aa5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 ZNF891A8MT65 544 aaPredicted RBP5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 GOLGA6DP0CG33 693 aa5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 ZNF20P17024 532 aa5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 SLC9A1P19634 815 aa5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 POU3F3P20264 500 aaPredicted RBP5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 PTX3P26022 381 aaPredicted RBP5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 APEX1P27695 318 aaKnown RBP5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 RGS3P49796 1198 aa5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 NEK4P51957 841 aa5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 SLC6A3Q01959 620 aa5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 PCOLCEQ15113 449 aa5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 LRRC41Q15345 812 aa5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 ZNF174Q15697 407 aa5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 ZMAT1Q5H9K5 638 aa5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 LCE5AQ5TCM9 118 aa5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 AGBL4Q5VU57 503 aa5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 ESRP1Q6NXG1 681 aaKnown RBP5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 SLC4A10Q6U841 1118 aa5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 C14orf80Q86SX3 495 aa5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 LRRTM3Q86VH5 581 aa5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 NIM1KQ8IY84 436 aa5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 RTKN2Q8IZC4 609 aa5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 ATL2Q8NHH9 583 aa5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 PAGR1Q9BTK6 254 aa5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 ZHX3Q9H4I2 956 aa5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 SEC61A2Q9H9S3 476 aa5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 CD248Q9HCU0 757 aa5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 ACSS2Q9NR19 701 aa5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 CHST12Q9NRB3 414 aa5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 GOLGA6AQ9NYA3 693 aa5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 CFAP43Q8NDM7 1665 aa5.24□□□□□ -1.57
PDLIM1P4-201ENST00000504327 CD109Q6YHK3 1445 aa5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 E2F8A0AVK6 867 aa5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 UBA6A0AVT1 1052 aaPredicted RBP5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 PATE3B3GLJ2 98 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms