RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 P4HBP07237 508 aaKnown RBP16.74■□□□□ 0.27
CPSF7-202ENST00000394888 PRPF38AQ8NAV1 312 aaKnown RBP16.74■□□□□ 0.27
CPSF7-202ENST00000394888 NEK9Q8TD19 979 aa16.74■□□□□ 0.27
CPSF7-202ENST00000394888 ALG3Q92685 438 aa16.74■□□□□ 0.27
CPSF7-202ENST00000394888 PMM2O15305 246 aa16.73■□□□□ 0.27
CPSF7-202ENST00000394888 ZNF862O60290 1169 aa16.73■□□□□ 0.27
CPSF7-202ENST00000394888 GRIN3BO60391 1043 aa16.73■□□□□ 0.27
CPSF7-202ENST00000394888 TMEM253P0C7T8 217 aa16.73■□□□□ 0.27
CPSF7-202ENST00000394888 PLS3P13797 630 aa16.73■□□□□ 0.27
CPSF7-202ENST00000394888 FERP16591 822 aa16.73■□□□□ 0.27
CPSF7-202ENST00000394888 HADHBP55084 474 aaKnown RBP16.73■□□□□ 0.27
CPSF7-202ENST00000394888 GUCY2DQ02846 1103 aa16.73■□□□□ 0.27
CPSF7-202ENST00000394888 PLS1Q14651 629 aa16.73■□□□□ 0.27
CPSF7-202ENST00000394888 ACP6Q9NPH0 428 aa16.73■□□□□ 0.27
CPSF7-202ENST00000394888 PXMP2Q9NR77 195 aa16.73■□□□□ 0.27
CPSF7-202ENST00000394888 FAM170AA1A519 330 aa16.73■□□□□ 0.27
CPSF7-202ENST00000394888 KCNK3O14649 394 aa16.73■□□□□ 0.27
CPSF7-202ENST00000394888 EPS15P42566 896 aa16.73■□□□□ 0.27
CPSF7-202ENST00000394888 TMOD2Q9NZR1 351 aa16.73■□□□□ 0.27
CPSF7-202ENST00000394888 GOLGA6BA6NDN3 693 aa16.73■□□□□ 0.27
CPSF7-202ENST00000394888 U2AF1L4Q8WU68 220 aaKnown RBP16.73■□□□□ 0.27
CPSF7-202ENST00000394888 ISCUQ9H1K1 167 aa16.73■□□□□ 0.27
CPSF7-202ENST00000394888 EPB41L4BQ9H329 900 aa16.73■□□□□ 0.27
CPSF7-202ENST00000394888 PCIF1Q9H4Z3 704 aa16.73■□□□□ 0.27
CPSF7-202ENST00000394888 PCDHA3Q9Y5H8 950 aa16.73■□□□□ 0.27
CPSF7-202ENST00000394888 EMSYQ7Z589 1322 aa16.73■□□□□ 0.27
CPSF7-202ENST00000394888 SBF1O95248 1867 aa16.72■□□□□ 0.27
CPSF7-202ENST00000394888 CLSTN1O94985 981 aa16.72■□□□□ 0.27
CPSF7-202ENST00000394888 KRT14P02533 472 aa16.72■□□□□ 0.27
CPSF7-202ENST00000394888 STAT1P42224 750 aa16.72■□□□□ 0.27
CPSF7-202ENST00000394888 WNT7BP56706 349 aa16.72■□□□□ 0.27
CPSF7-202ENST00000394888 PLA2G4FQ68DD2 849 aa16.72■□□□□ 0.27
CPSF7-202ENST00000394888 DDX42Q86XP3 938 aaKnown RBP eCLIP16.72■□□□□ 0.27
CPSF7-202ENST00000394888 CD302Q8IX05 232 aa16.72■□□□□ 0.27
CPSF7-202ENST00000394888 TMEM161BQ8NDZ6 487 aa16.72■□□□□ 0.27
CPSF7-202ENST00000394888 PDCD2LQ9BRP1 358 aa16.72■□□□□ 0.27
CPSF7-202ENST00000394888 FZD1Q9UP38 647 aa16.72■□□□□ 0.27
CPSF7-202ENST00000394888 YWHABP31946 246 aaKnown RBP16.72■□□□□ 0.27
CPSF7-202ENST00000394888 MYL7Q01449 175 aa16.72■□□□□ 0.27
CPSF7-202ENST00000394888 AADACL2Q6P093 401 aa16.72■□□□□ 0.27
CPSF7-202ENST00000394888 MAEAQ7L5Y9 396 aa16.72■□□□□ 0.27
CPSF7-202ENST00000394888 CD101Q93033 1021 aa16.72■□□□□ 0.27
CPSF7-202ENST00000394888 AP1M1Q9BXS5 423 aa16.72■□□□□ 0.27
CPSF7-202ENST00000394888 TMEM117Q9H0C3 514 aa16.72■□□□□ 0.27
CPSF7-202ENST00000394888 HSPA9P38646 679 aaKnown RBP16.72■□□□□ 0.27
CPSF7-202ENST00000394888 C4orf19Q8IY42 314 aa16.72■□□□□ 0.27
CPSF7-202ENST00000394888 DDX1Q92499 740 aaKnown RBP16.72■□□□□ 0.27
CPSF7-202ENST00000394888 SOX10P56693 466 aa16.71■□□□□ 0.27
CPSF7-202ENST00000394888 TRAF1Q13077 416 aa16.71■□□□□ 0.27
CPSF7-202ENST00000394888 MIER3Q7Z3K6 550 aa16.71■□□□□ 0.27
CPSF7-202ENST00000394888 ELMO3Q96BJ8 720 aa16.71■□□□□ 0.27
CPSF7-202ENST00000394888 HSPBP1Q9NZL4 362 aa16.71■□□□□ 0.27
CPSF7-202ENST00000394888 ZNF112Q9UJU3 913 aa16.71■□□□□ 0.27
CPSF7-202ENST00000394888 K7ENM7 598 aa16.71■□□□□ 0.27
CPSF7-202ENST00000394888 MAPK13O15264 365 aa16.71■□□□□ 0.27
CPSF7-202ENST00000394888 FLOT1O75955 427 aa16.71■□□□□ 0.27
CPSF7-202ENST00000394888 MTMR1Q13613 665 aa16.71■□□□□ 0.27
CPSF7-202ENST00000394888 RPS6KA1Q15418 735 aa16.71■□□□□ 0.27
CPSF7-202ENST00000394888 OGFOD1Q8N543 542 aa16.71■□□□□ 0.27
CPSF7-202ENST00000394888 RDH13Q8NBN7 331 aa16.71■□□□□ 0.27
CPSF7-202ENST00000394888 LPAR1Q92633 364 aa16.71■□□□□ 0.27
CPSF7-202ENST00000394888 PBKQ96KB5 322 aa16.71■□□□□ 0.27
CPSF7-202ENST00000394888 CALR3Q96L12 384 aaKnown RBP16.71■□□□□ 0.27
CPSF7-202ENST00000394888 FBXL18Q96ME1 805 aa16.71■□□□□ 0.27
CPSF7-202ENST00000394888 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.71■□□□□ 0.271e-7■■■■□ 22.8
CPSF7-202ENST00000394888 KIFC3Q9BVG8 833 aa16.71■□□□□ 0.27
CPSF7-202ENST00000394888 STK32BQ9NY57 414 aa16.71■□□□□ 0.27
CPSF7-202ENST00000394888 VWA5AO00534 786 aa16.71■□□□□ 0.26
CPSF7-202ENST00000394888 H2AFZP0C0S5 128 aa16.71■□□□□ 0.26
CPSF7-202ENST00000394888 QARSP47897 775 aaKnown RBP16.71■□□□□ 0.26
CPSF7-202ENST00000394888 MARCKSL1P49006 195 aa16.71■□□□□ 0.26
CPSF7-202ENST00000394888 MTMR2Q13614 643 aa16.71■□□□□ 0.26
CPSF7-202ENST00000394888 UBAP2Q5T6F2 1119 aaKnown RBP16.71■□□□□ 0.26
CPSF7-202ENST00000394888 CCDC181Q5TID7 509 aa16.71■□□□□ 0.26
CPSF7-202ENST00000394888 SCARA3Q6AZY7 606 aa16.71■□□□□ 0.26
CPSF7-202ENST00000394888 H2AFVQ71UI9 128 aa16.71■□□□□ 0.26
CPSF7-202ENST00000394888 EIF1ADQ8N9N8 165 aaKnown RBP16.71■□□□□ 0.26
CPSF7-202ENST00000394888 AFAP1L1Q8TED9 768 aa16.71■□□□□ 0.26
CPSF7-202ENST00000394888 FAM84AQ96KN4 292 aa16.71■□□□□ 0.26
CPSF7-202ENST00000394888 SENP7Q9BQF6 1050 aa16.71■□□□□ 0.26
CPSF7-202ENST00000394888 ARHGEF35A5YM69 484 aa16.7■□□□□ 0.26
CPSF7-202ENST00000394888 KCNA2P16389 499 aa16.7■□□□□ 0.26
CPSF7-202ENST00000394888 EIF2AK2P19525 551 aaKnown RBP16.7■□□□□ 0.26
CPSF7-202ENST00000394888 NOP9Q86U38 636 aaKnown RBP16.7■□□□□ 0.26
CPSF7-202ENST00000394888 HELQQ8TDG4 1101 aa16.7■□□□□ 0.26
CPSF7-202ENST00000394888 RFFLQ8WZ73 363 aa16.7■□□□□ 0.26
CPSF7-202ENST00000394888 CEP89Q96ST8 783 aa16.7■□□□□ 0.26
CPSF7-202ENST00000394888 TP73O15350 636 aa16.7■□□□□ 0.26
CPSF7-202ENST00000394888 PAFAH1B1P43034 410 aa16.7■□□□□ 0.26
CPSF7-202ENST00000394888 SKOR1P84550 965 aa16.7■□□□□ 0.26
CPSF7-202ENST00000394888 TBC1D10BQ4KMP7 808 aaPredicted RBP16.7■□□□□ 0.26
CPSF7-202ENST00000394888 EPS8L1Q8TE68 723 aa16.7■□□□□ 0.26
CPSF7-202ENST00000394888 DDX47Q9H0S4 455 aaKnown RBP16.7■□□□□ 0.26
CPSF7-202ENST00000394888 ZNF214Q9UL59 606 aaPredicted RBP16.7■□□□□ 0.26
CPSF7-202ENST00000394888 COQ4Q9Y3A0 265 aa16.7■□□□□ 0.26
CPSF7-202ENST00000394888 SART1O43290 800 aaKnown RBP16.69■□□□□ 0.26
CPSF7-202ENST00000394888 VAMP7P51809 220 aa16.69■□□□□ 0.26
CPSF7-202ENST00000394888 FAM71AQ8IYT1 594 aa16.69■□□□□ 0.26
CPSF7-202ENST00000394888 SH2D3CQ8N5H7 860 aa16.69■□□□□ 0.26
CPSF7-202ENST00000394888 ZNF526Q8TF50 670 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms