RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 PRM10P42946 383 aa-2.17□□□□□ -2.76
snR53snR53 SUR7P54003 302 aa-2.17□□□□□ -2.76
snR53snR53 YLH47Q06493 454 aa-2.17□□□□□ -2.76
snR53snR53 VAM3Q12241 283 aa-2.17□□□□□ -2.76
snR53snR53 TPK3P05986 398 aa-2.18□□□□□ -2.76
snR53snR53 DSE1P40077 573 aa-2.18□□□□□ -2.76
snR53snR53 GTR1Q00582 310 aa-2.18□□□□□ -2.76
snR53snR53 OSH6Q02201 448 aa-2.18□□□□□ -2.76
snR53snR53 ATM1P40416 690 aa-2.19□□□□□ -2.76
snR53snR53 YOR268CQ08734 132 aa-2.19□□□□□ -2.76
snR53snR53 TRM10Q12400 293 aa-2.19□□□□□ -2.76
snR53snR53 AVT2P39981 480 aa-2.2□□□□□ -2.76
snR53snR53 STE24P47154 453 aa-2.2□□□□□ -2.76
snR53snR53 FMS1P50264 508 aa-2.2□□□□□ -2.76
snR53snR53 RSM27P53305 110 aa-2.2□□□□□ -2.76
snR53snR53 YNR062CP53748 327 aa-2.2□□□□□ -2.76
snR53snR53 LCL2Q08045 131 aa-2.2□□□□□ -2.76
snR53snR53 ISA2Q12425 185 aa-2.2□□□□□ -2.76
snR53snR53 QCR8P08525 94 aa-2.21□□□□□ -2.76
snR53snR53 FBA1P14540 359 aaKnown RBP-2.21□□□□□ -2.76
snR53snR53 GFD2P25370 566 aaKnown RBP-2.21□□□□□ -2.76
snR53snR53 YHL044WP38727 235 aa-2.21□□□□□ -2.76
snR53snR53 TIM21P53220 239 aa-2.21□□□□□ -2.76
snR53snR53 DIS3Q08162 1001 aaKnown RBP-2.21□□□□□ -2.76
snR53snR53 RPN8Q08723 338 aaKnown RBP-2.21□□□□□ -2.76
snR53snR53 ATG29Q12092 213 aa-2.21□□□□□ -2.76
snR53snR53 NIP1P32497 812 aaKnown RBP-2.22□□□□□ -2.76
snR53snR53 MNL1P38888 796 aa-2.22□□□□□ -2.76
snR53snR53 PAC11P40960 533 aa-2.22□□□□□ -2.76
snR53snR53 MRX6P48564 524 aa-2.22□□□□□ -2.76
snR53snR53 ERV29P53337 310 aa-2.22□□□□□ -2.76
snR53snR53 NSE1Q07913 336 aa-2.22□□□□□ -2.76
snR53snR53 GAT3Q07928 141 aa-2.22□□□□□ -2.76
snR53snR53 ALE1Q08548 619 aa-2.22□□□□□ -2.76
snR53snR53 RPL3P14126 387 aaKnown RBP-2.23□□□□□ -2.77
snR53snR53 MET28P40573 187 aa-2.23□□□□□ -2.77
snR53snR53 COS5P47187 383 aa-2.23□□□□□ -2.77
snR53snR53 TRM82Q03774 444 aa-2.23□□□□□ -2.77
snR53snR53 FCF1Q05498 189 aaPredicted RBP-2.23□□□□□ -2.77
snR53snR53 STE23Q06010 1027 aa-2.23□□□□□ -2.77
snR53snR53 FLO9P39712 1322 aa-2.23□□□□□ -2.77
snR53snR53 AAC3P18238 307 aa-2.24□□□□□ -2.77
snR53snR53 YHB1P39676 399 aaKnown RBP-2.24□□□□□ -2.77
snR53snR53 RRB1Q04225 511 aaKnown RBP-2.24□□□□□ -2.77
snR53snR53 CTR3Q06686 241 aa-2.24□□□□□ -2.77
snR53snR53 MRX9Q07349 420 aaKnown RBP-2.24□□□□□ -2.77
snR53snR53 MRPL23Q12487 163 aaPredicted RBP-2.24□□□□□ -2.77
snR53snR53 SRV2P17555 526 aaKnown RBP-2.25□□□□□ -2.77
snR53snR53 SCL1P21243 252 aaKnown RBP-2.25□□□□□ -2.77
snR53snR53 SIF2P38262 535 aa-2.25□□□□□ -2.77
snR53snR53 SOK1P40317 901 aa-2.25□□□□□ -2.77
snR53snR53 CAK1P43568 368 aaPredicted RBP-2.25□□□□□ -2.77
snR53snR53 BUD25P85052 153 aa-2.25□□□□□ -2.77
snR53snR53 DOA1P36037 715 aa-2.26□□□□□ -2.77
snR53snR53 MET18P40469 1032 aa-2.26□□□□□ -2.77
snR53snR53 CYT2Q00873 224 aa-2.26□□□□□ -2.77
snR53snR53 MEU1Q07938 337 aaKnown RBP RIP-Chip data-2.26□□□□□ -2.77not detected
snR53snR53 FMP49A0A023PZB3 126 aa-2.27□□□□□ -2.77
snR53snR53 COX3P00420 269 aa-2.27□□□□□ -2.77
snR53snR53 HXT2P23585 541 aa-2.27□□□□□ -2.77
snR53snR53 TOA2P32774 122 aa-2.27□□□□□ -2.77
snR53snR53 YER076CP40049 302 aa-2.27□□□□□ -2.77
snR53snR53 YGR266WP53326 701 aa-2.27□□□□□ -2.77
snR53snR53 ERO1Q03103 563 aa-2.27□□□□□ -2.77
snR53snR53 OPI3P05375 206 aa-2.28□□□□□ -2.77
snR53snR53 CDC21P06785 304 aa-2.28□□□□□ -2.77
snR53snR53 PBN1P25580 416 aa-2.28□□□□□ -2.77
snR53snR53 SCM4P32564 187 aa-2.28□□□□□ -2.77
snR53snR53 UGX2P32772 223 aa-2.28□□□□□ -2.77
snR53snR53 PEX5P35056 612 aa-2.28□□□□□ -2.77
snR53snR53 RRN3P36070 627 aa-2.28□□□□□ -2.77
snR53snR53 BYE1P36106 594 aa-2.28□□□□□ -2.77
snR53snR53 PCH2P38126 564 aa-2.28□□□□□ -2.77
snR53snR53 SAP185P40856 1058 aa-2.28□□□□□ -2.77
snR53snR53 SNX4P47057 423 aa-2.28□□□□□ -2.77
snR53snR53 MNP1P53163 194 aaPredicted RBP-2.28□□□□□ -2.77
snR53snR53 MDM1Q01846 1127 aa-2.28□□□□□ -2.77
snR53snR53 SKO1Q02100 647 aa-2.28□□□□□ -2.77
snR53snR53 NFI1Q12216 726 aa-2.28□□□□□ -2.77
snR53snR53 GLE1Q12315 538 aa-2.28□□□□□ -2.77
snR53snR53 ARF1P11076 181 aaKnown RBP-2.29□□□□□ -2.78
snR53snR53 SRP72P38688 640 aaKnown RBP-2.29□□□□□ -2.78
snR53snR53 SYS1P41544 203 aa-2.29□□□□□ -2.78
snR53snR53 TPC1P53257 314 aa-2.29□□□□□ -2.78
snR53snR53 OCA2P53949 197 aa-2.29□□□□□ -2.78
snR53snR53 PRM15Q03262 622 aa-2.29□□□□□ -2.78
snR53snR53 ERB1Q04660 807 aaKnown RBP-2.29□□□□□ -2.78
snR53snR53 RRP45Q05636 305 aaKnown RBP-2.29□□□□□ -2.78
snR53snR53 COS7Q07788 383 aa-2.29□□□□□ -2.78
snR53snR53 MHT1Q12525 324 aa-2.29□□□□□ -2.78
snR53snR53 MHP1P43638 1398 aa-2.29□□□□□ -2.78
snR53snR53 ACC1Q00955 2233 aaKnown RBP-2.3□□□□□ -2.78
snR53snR53 ATP4P05626 244 aa-2.3□□□□□ -2.78
snR53snR53 RQC1Q05468 723 aaKnown RBP-2.3□□□□□ -2.78
snR53snR53 TAF10Q12030 206 aa-2.3□□□□□ -2.78
snR53snR53 VMA2P16140 517 aaKnown RBP-2.31□□□□□ -2.78
snR53snR53 MXR2P25566 168 aa-2.31□□□□□ -2.78
snR53snR53 PEX4P29340 183 aa-2.31□□□□□ -2.78
snR53snR53 ZTA1P38230 334 aaKnown RBP-2.31□□□□□ -2.78
snR53snR53 MBA1P38300 278 aa-2.31□□□□□ -2.78
Retrieved 100 of 5,963 RNA–protein pairs in 101.8 ms