RNA–Protein interactions for RNA: YPR094W

RDS3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene RDS3, Length 324 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDS3YPR094W CBP2P03874 630 aaPredicted RBP-0.34□□□□□ -2.46
RDS3YPR094W MET17P06106 444 aa-0.34□□□□□ -2.46
RDS3YPR094W ATG15P25641 520 aa-0.34□□□□□ -2.46
RDS3YPR094W HSP104P31539 908 aaKnown RBP-0.34□□□□□ -2.46
RDS3YPR094W CSE1P33307 960 aa-0.34□□□□□ -2.46
RDS3YPR094W COY1P34237 679 aa-0.34□□□□□ -2.46
RDS3YPR094W KDX1P36005 433 aa-0.34□□□□□ -2.46
RDS3YPR094W FUI1P38196 639 aa-0.34□□□□□ -2.46
RDS3YPR094W OLA1P38219 394 aaKnown RBP-0.34□□□□□ -2.46
RDS3YPR094W QDR3P38227 689 aa-0.34□□□□□ -2.46
RDS3YPR094W YJR141WP47172 347 aaPredicted RBP-0.34□□□□□ -2.46
RDS3YPR094W TPC1P53257 314 aa-0.34□□□□□ -2.46
RDS3YPR094W RPT4P53549 437 aaKnown RBP-0.34□□□□□ -2.46
RDS3YPR094W MZM1Q03429 123 aaPredicted RBP-0.34□□□□□ -2.46
RDS3YPR094W AIM36Q03798 255 aa-0.34□□□□□ -2.46
RDS3YPR094W DON1Q05610 365 aa-0.34□□□□□ -2.46
RDS3YPR094W TRM10Q12400 293 aa-0.34□□□□□ -2.46
RDS3YPR094W ERP3Q12403 225 aa-0.34□□□□□ -2.46
RDS3YPR094W AGC1Q12482 902 aa-0.34□□□□□ -2.46
RDS3YPR094W DET1Q99288 334 aaKnown RBP-0.34□□□□□ -2.46
RDS3YPR094W TDH1P00360 332 aaKnown RBP-0.35□□□□□ -2.47
RDS3YPR094W SSH4P32343 579 aa-0.35□□□□□ -2.47
RDS3YPR094W RIM1P32445 135 aaKnown RBP-0.35□□□□□ -2.47
RDS3YPR094W YSC83P32792 385 aa-0.35□□□□□ -2.47
RDS3YPR094W VPS24P36095 224 aaKnown RBP-0.35□□□□□ -2.47
RDS3YPR094W SER3P40054 469 aa-0.35□□□□□ -2.47
RDS3YPR094W BIO4P53630 237 aa-0.35□□□□□ -2.47
RDS3YPR094W ALG9P53868 555 aaKnown RBP-0.35□□□□□ -2.47
RDS3YPR094W OSH6Q02201 448 aa-0.35□□□□□ -2.47
RDS3YPR094W ROY1Q04847 553 aa-0.35□□□□□ -2.47
RDS3YPR094W YDR341CQ05506 607 aaKnown RBP-0.35□□□□□ -2.47
RDS3YPR094W IMH1Q06704 911 aaKnown RBP-0.35□□□□□ -2.47
RDS3YPR094W MIM1Q08176 113 aa-0.35□□□□□ -2.47
RDS3YPR094W ZWF1P11412 505 aaKnown RBP-0.36□□□□□ -2.47
RDS3YPR094W RRP7P25368 297 aaPredicted RBP-0.36□□□□□ -2.47
RDS3YPR094W PWP2P25635 923 aaKnown RBP-0.36□□□□□ -2.47
RDS3YPR094W DOA4P32571 926 aa-0.36□□□□□ -2.47
RDS3YPR094W NRP1P32770 719 aaKnown RBP RIP-Chip data-0.36□□□□□ -2.47not detected
RDS3YPR094W ZTA1P38230 334 aaKnown RBP-0.36□□□□□ -2.47
RDS3YPR094W YHR045WP38775 560 aa-0.36□□□□□ -2.47
RDS3YPR094W MNL1P38888 796 aa-0.36□□□□□ -2.47
RDS3YPR094W YDR089WP38966 869 aa-0.36□□□□□ -2.47
RDS3YPR094W EDC2P40023 145 aaPredicted RBP-0.36□□□□□ -2.47
RDS3YPR094W UTP25P40498 721 aaKnown RBP-0.36□□□□□ -2.47
RDS3YPR094W ARF3P40994 183 aaRIP-Chip data-0.36□□□□□ -2.47not detected
RDS3YPR094W RPL10P41805 221 aaKnown RBP-0.36□□□□□ -2.47
RDS3YPR094W CIS3P47001 227 aa-0.36□□□□□ -2.47
RDS3YPR094W MND1P53102 219 aa-0.36□□□□□ -2.47
RDS3YPR094W CAB4P53332 305 aa-0.36□□□□□ -2.47
RDS3YPR094W NOP6Q07623 225 aaKnown RBP-0.36□□□□□ -2.47
RDS3YPR094W ISA2Q12425 185 aa-0.36□□□□□ -2.47
RDS3YPR094W UBA3Q99344 299 aa-0.36□□□□□ -2.47
RDS3YPR094W RAD10P06838 210 aa-0.37□□□□□ -2.47
RDS3YPR094W CKA1P15790 372 aa-0.37□□□□□ -2.47
RDS3YPR094W FPR1P20081 114 aaKnown RBP-0.37□□□□□ -2.47
RDS3YPR094W YKL187CP34231 750 aa-0.37□□□□□ -2.47
RDS3YPR094W PEP8P40335 379 aa-0.37□□□□□ -2.47
RDS3YPR094W MRPL49P40858 161 aaPredicted RBP-0.37□□□□□ -2.47
RDS3YPR094W PMT4P46971 762 aa-0.37□□□□□ -2.47
RDS3YPR094W RTS3P53289 263 aa-0.37□□□□□ -2.47
RDS3YPR094W RRB1Q04225 511 aaKnown RBP-0.37□□□□□ -2.47
RDS3YPR094W SHS1Q07657 551 aa-0.37□□□□□ -2.47
RDS3YPR094W MED2Q12124 431 aa-0.37□□□□□ -2.47
RDS3YPR094W RPN6Q12377 434 aa-0.37□□□□□ -2.47
RDS3YPR094W PFK27Q12471 397 aaPredicted RBP-0.37□□□□□ -2.47
RDS3YPR094W YAL063C-AQ3E791 96 aa-0.37□□□□□ -2.47
RDS3YPR094W RAS2P01120 322 aaKnown RBP-0.38□□□□□ -2.47
RDS3YPR094W VAR1P02381 398 aa-0.38□□□□□ -2.47
RDS3YPR094W RPL2AP0CX45 254 aaKnown RBP-0.38□□□□□ -2.47
RDS3YPR094W RPL2BP0CX46 254 aaKnown RBP-0.38□□□□□ -2.47
RDS3YPR094W MDH1P17505 334 aaKnown RBP RIP-Chip data-0.38□□□□□ -2.47not detected
RDS3YPR094W VPS1P21576 704 aaKnown RBP-0.38□□□□□ -2.47
RDS3YPR094W MRPL8P22353 238 aa-0.38□□□□□ -2.47
RDS3YPR094W TRX2P22803 104 aaKnown RBP-0.38□□□□□ -2.47
RDS3YPR094W CLB3P24870 427 aa-0.38□□□□□ -2.47
RDS3YPR094W YGL010WP25338 174 aa-0.38□□□□□ -2.47
RDS3YPR094W PHO91P27514 894 aa-0.38□□□□□ -2.47
RDS3YPR094W KRE6P32486 720 aa-0.38□□□□□ -2.47
RDS3YPR094W MPE1P35728 441 aaKnown RBP-0.38□□□□□ -2.47
RDS3YPR094W PCH2P38126 564 aa-0.38□□□□□ -2.47
RDS3YPR094W SLM4P38247 162 aa-0.38□□□□□ -2.47
RDS3YPR094W YBR220CP38318 560 aa-0.38□□□□□ -2.47
RDS3YPR094W YHL044WP38727 235 aa-0.38□□□□□ -2.47
RDS3YPR094W SHC1P39000 512 aa-0.38□□□□□ -2.47
RDS3YPR094W COG3P40094 801 aa-0.38□□□□□ -2.47
RDS3YPR094W TPM2P40414 161 aa-0.38□□□□□ -2.47
RDS3YPR094W PAC11P40960 533 aa-0.38□□□□□ -2.47
RDS3YPR094W MPS2P53159 387 aa-0.38□□□□□ -2.47
RDS3YPR094W YGR266WP53326 701 aa-0.38□□□□□ -2.47
RDS3YPR094W RTT102P53330 157 aa-0.38□□□□□ -2.47
RDS3YPR094W FCF1Q05498 189 aaPredicted RBP-0.38□□□□□ -2.47
RDS3YPR094W BUR2Q05949 395 aa-0.38□□□□□ -2.47
RDS3YPR094W YLR456WQ06199 204 aa-0.38□□□□□ -2.47
RDS3YPR094W YOR268CQ08734 132 aa-0.38□□□□□ -2.47
RDS3YPR094W YOR292CQ08743 309 aa-0.38□□□□□ -2.47
RDS3YPR094W MHP1P43638 1398 aa-0.38□□□□□ -2.47
RDS3YPR094W YCR051WP25631 222 aa-0.39□□□□□ -2.47
RDS3YPR094W PEX5P35056 612 aa-0.39□□□□□ -2.47
RDS3YPR094W SKI2P35207 1287 aaKnown RBP RIP-Chip data-0.39□□□□□ -2.47not detected
RDS3YPR094W YHR177WP38867 453 aa-0.39□□□□□ -2.47
Retrieved 100 of 5,963 RNA–protein pairs in 53.8 ms