RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W DBP9Q06218 594 aaKnown RBP2.41□□□□□ -2.02
VPS38YLR360W MHP1P43638 1398 aa2.4□□□□□ -2.03
VPS38YLR360W CIN8P27895 1000 aa2.4□□□□□ -2.03
VPS38YLR360W IME2P32581 645 aa2.4□□□□□ -2.03
VPS38YLR360W YHR122WP38829 231 aa2.4□□□□□ -2.03
VPS38YLR360W ALP1P38971 573 aa2.4□□□□□ -2.03
VPS38YLR360W BDH1P39714 382 aa2.4□□□□□ -2.03
VPS38YLR360W CPR7P47103 393 aa2.4□□□□□ -2.03
VPS38YLR360W ZRG17P53735 605 aa2.4□□□□□ -2.03
VPS38YLR360W HCH1P53834 153 aa2.4□□□□□ -2.03
VPS38YLR360W PRM1P53835 661 aa2.4□□□□□ -2.03
VPS38YLR360W YMR244WQ04018 355 aa2.4□□□□□ -2.03
VPS38YLR360W NBL1Q3E7Y6 73 aa2.4□□□□□ -2.03
VPS38YLR360W VPS63O13549 108 aa2.39□□□□□ -2.03
VPS38YLR360W ERG9P29704 444 aa2.39□□□□□ -2.03
VPS38YLR360W AGA2P32781 87 aa2.39□□□□□ -2.03
VPS38YLR360W MYO3P36006 1272 aa2.39□□□□□ -2.03
VPS38YLR360W YIL059CP40520 121 aa2.39□□□□□ -2.03
VPS38YLR360W APC4Q04601 652 aa2.39□□□□□ -2.03
VPS38YLR360W YDR018CQ12185 396 aa2.39□□□□□ -2.03
VPS38YLR360W RGS2Q99188 309 aa2.39□□□□□ -2.03
VPS38YLR360W YMR262WP38430 313 aa2.38□□□□□ -2.03
VPS38YLR360W MMS21P38632 267 aa2.38□□□□□ -2.03
VPS38YLR360W PRP39P39682 629 aaKnown RBP2.38□□□□□ -2.03
VPS38YLR360W YMR134WP40207 237 aa2.38□□□□□ -2.03
VPS38YLR360W NAS6P50086 228 aa2.38□□□□□ -2.03
VPS38YLR360W YNL146WP53906 100 aa2.38□□□□□ -2.03
VPS38YLR360W RPN8Q08723 338 aaKnown RBP2.38□□□□□ -2.03
VPS38YLR360W CPT1P17898 393 aa2.37□□□□□ -2.03
VPS38YLR360W POT1P27796 417 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
VPS38YLR360W KTI12P34253 313 aaKnown RBP2.37□□□□□ -2.03
VPS38YLR360W EBP2P36049 427 aaKnown RBP2.37□□□□□ -2.03
VPS38YLR360W SIF2P38262 535 aa2.37□□□□□ -2.03
VPS38YLR360W FMP48P53233 369 aa2.37□□□□□ -2.03
VPS38YLR360W FAR10Q06001 478 aa2.37□□□□□ -2.03
VPS38YLR360W PML1Q07930 204 aaPredicted RBP2.37□□□□□ -2.03
VPS38YLR360W APC2Q12440 853 aa2.37□□□□□ -2.03
VPS38YLR360W SPO24Q3E752 67 aa2.37□□□□□ -2.03
VPS38YLR360W TAL1P15019 335 aaKnown RBP2.36□□□□□ -2.03
VPS38YLR360W CTA1P15202 515 aa2.36□□□□□ -2.03
VPS38YLR360W ZRT3P34240 503 aa2.36□□□□□ -2.03
VPS38YLR360W PEX32P38292 413 aa2.36□□□□□ -2.03
VPS38YLR360W ASG7P46993 209 aa2.36□□□□□ -2.03
VPS38YLR360W TPC1P53257 314 aa2.36□□□□□ -2.03
VPS38YLR360W SPS100P13130 326 aa2.35□□□□□ -2.03
VPS38YLR360W DCC1P25559 380 aa2.35□□□□□ -2.03
VPS38YLR360W CBF5P33322 483 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
VPS38YLR360W RFT1P38206 574 aaPredicted RBP2.35□□□□□ -2.03
VPS38YLR360W SMF2P38778 549 aa2.35□□□□□ -2.03
VPS38YLR360W YIL089WP40500 205 aa2.35□□□□□ -2.03
VPS38YLR360W COS4P43542 379 aa2.35□□□□□ -2.03
VPS38YLR360W YGL114WP53134 725 aa2.35□□□□□ -2.03
VPS38YLR360W GMC1Q04399 608 aa2.35□□□□□ -2.03
VPS38YLR360W ECM19Q06011 112 aa2.35□□□□□ -2.03
VPS38YLR360W SAL1D6W196 494 aa2.34□□□□□ -2.04
VPS38YLR360W CUP2P15315 225 aa2.34□□□□□ -2.04
VPS38YLR360W APE4P38821 490 aa2.34□□□□□ -2.04
VPS38YLR360W BTT1P40314 149 aaPredicted RBP2.34□□□□□ -2.04
VPS38YLR360W YIL054WP40524 105 aa2.34□□□□□ -2.04
VPS38YLR360W RPN14P53196 417 aa2.34□□□□□ -2.04
VPS38YLR360W SMD1Q02260 146 aaPredicted RBP2.34□□□□□ -2.04
VPS38YLR360W BUR2Q05949 395 aa2.34□□□□□ -2.04
VPS38YLR360W SPH1Q06160 661 aa2.34□□□□□ -2.04
VPS38YLR360W REP1P03871 373 aa2.33□□□□□ -2.04
VPS38YLR360W RBK1P25332 333 aa2.33□□□□□ -2.04
VPS38YLR360W MEI5P32489 222 aa2.33□□□□□ -2.04
VPS38YLR360W VPH1P32563 840 aaKnown RBP2.33□□□□□ -2.04
VPS38YLR360W SWI3P32591 825 aa2.33□□□□□ -2.04
VPS38YLR360W SRB2P34162 210 aa2.33□□□□□ -2.04
VPS38YLR360W DSE1P40077 573 aa2.33□□□□□ -2.04
VPS38YLR360W RRG9P40156 214 aa2.33□□□□□ -2.04
VPS38YLR360W CAX4P53223 239 aa2.33□□□□□ -2.04
VPS38YLR360W PXR1P53335 271 aaPredicted RBP2.33□□□□□ -2.04
VPS38YLR360W DIA1P54005 336 aa2.33□□□□□ -2.04
VPS38YLR360W VTI1Q04338 217 aa2.33□□□□□ -2.04
VPS38YLR360W DFM1Q12743 341 aaKnown RBP2.33□□□□□ -2.04
VPS38YLR360W MRPL20P22354 195 aaPredicted RBP2.32□□□□□ -2.04
VPS38YLR360W RPB9P27999 122 aa2.32□□□□□ -2.04
VPS38YLR360W ITR2P30606 609 aa2.32□□□□□ -2.04
VPS38YLR360W VMA5P31412 392 aaKnown RBP2.32□□□□□ -2.04
VPS38YLR360W SMI1P32566 505 aa2.32□□□□□ -2.04
VPS38YLR360W BLI1P35727 113 aa2.32□□□□□ -2.04
VPS38YLR360W PMT4P46971 762 aa2.32□□□□□ -2.04
VPS38YLR360W YGL118CP53132 145 aa2.32□□□□□ -2.04
VPS38YLR360W MRX9Q07349 420 aaKnown RBP2.32□□□□□ -2.04
VPS38YLR360W PSY3Q12318 242 aa2.32□□□□□ -2.04
VPS38YLR360W MIC19P43594 170 aa2.31□□□□□ -2.04
VPS38YLR360W TAF6P53040 516 aa2.31□□□□□ -2.04
VPS38YLR360W SDS23P53172 527 aa2.31□□□□□ -2.04
VPS38YLR360W PDR16P53860 351 aaKnown RBP2.31□□□□□ -2.04
VPS38YLR360W IGO1P53897 168 aa2.31□□□□□ -2.04
VPS38YLR360W MIM1Q08176 113 aa2.31□□□□□ -2.04
VPS38YLR360W YPR096CO13587 100 aa2.3□□□□□ -2.04
VPS38YLR360W RPS23AP0CX29 145 aaKnown RBP2.3□□□□□ -2.04
VPS38YLR360W RPS23BP0CX30 145 aa2.3□□□□□ -2.04
VPS38YLR360W YEL043WP32618 956 aa2.3□□□□□ -2.04
VPS38YLR360W YKL187CP34231 750 aa2.3□□□□□ -2.04
VPS38YLR360W CAB3P36076 571 aa2.3□□□□□ -2.04
VPS38YLR360W RCK1P38622 512 aa2.3□□□□□ -2.04
VPS38YLR360W SPO73P40031 143 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 46.7 ms