RNA–Protein interactions for RNA: YLR208W

SEC13, Transcript of Structural component of 3 distinct complexes, yeast

Gene SEC13, Length 894 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC13	YLR208W	PHO13	P19881	312 aa		4.97	□□□□□ -1.61
SEC13	YLR208W	UTR1	P21373	530 aa		4.97	□□□□□ -1.61
SEC13	YLR208W	PBN1	P25580	416 aa		4.97	□□□□□ -1.61
SEC13	YLR208W	ADE1	P27616	306 aa		4.97	□□□□□ -1.61
SEC13	YLR208W	PPA2	P28239	310 aa		4.97	□□□□□ -1.61
SEC13	YLR208W	YIM1	P28625	365 aa		4.97	□□□□□ -1.61
SEC13	YLR208W	ATP7	P30902	174 aa		4.97	□□□□□ -1.61
SEC13	YLR208W	ECT1	P33412	323 aa		4.97	□□□□□ -1.61
SEC13	YLR208W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
SEC13	YLR208W	ASC1	P38011	319 aa	Known RBP	4.97	□□□□□ -1.61
SEC13	YLR208W	OLA1	P38219	394 aa	Known RBP	4.97	□□□□□ -1.61
SEC13	YLR208W	YMR262W	P38430	313 aa		4.97	□□□□□ -1.61
SEC13	YLR208W	INM1	P38710	295 aa		4.97	□□□□□ -1.61
SEC13	YLR208W	CDC40	P40968	455 aa	Predicted RBP	4.97	□□□□□ -1.61
SEC13	YLR208W	AZF1	P41696	914 aa		4.97	□□□□□ -1.61
SEC13	YLR208W	HOC1	P47124	396 aa		4.97	□□□□□ -1.61
SEC13	YLR208W	MIG2	P53035	382 aa		4.97	□□□□□ -1.61
SEC13	YLR208W	MPS1	P54199	764 aa		4.97	□□□□□ -1.61
SEC13	YLR208W	YDR109C	Q04585	715 aa		4.97	□□□□□ -1.61
SEC13	YLR208W	YMR310C	Q04867	317 aa	Predicted RBP	4.97	□□□□□ -1.61
SEC13	YLR208W	GLO2	Q05584	274 aa		4.97	□□□□□ -1.61
SEC13	YLR208W	PDR8	Q06149	701 aa		4.97	□□□□□ -1.61
SEC13	YLR208W	ATG31	Q12421	196 aa		4.97	□□□□□ -1.61
SEC13	YLR208W	YLR462W	O13556	202 aa		4.96	□□□□□ -1.62
SEC13	YLR208W	RPL27A	P0C2H6	136 aa	Known RBP	4.96	□□□□□ -1.62
SEC13	YLR208W	RPL27B	P0C2H7	136 aa	Known RBP	4.96	□□□□□ -1.62
SEC13	YLR208W	RPL31B	P0C2H9	113 aa	Known RBP	4.96	□□□□□ -1.62
SEC13	YLR208W	RPL24B	P24000	155 aa	Known RBP	4.96	□□□□□ -1.62
SEC13	YLR208W	YCP4	P25349	247 aa	Known RBP	4.96	□□□□□ -1.62
SEC13	YLR208W	RAD23	P32628	398 aa	Known RBP	4.96	□□□□□ -1.62
SEC13	YLR208W	RRN10	P38204	145 aa		4.96	□□□□□ -1.62
SEC13	YLR208W	YHL012W	P38709	493 aa		4.96	□□□□□ -1.62
SEC13	YLR208W	YHL049C	P38722	271 aa		4.96	□□□□□ -1.62
SEC13	YLR208W	RTC3	P38804	111 aa	Predicted RBP	4.96	□□□□□ -1.62
SEC13	YLR208W	GGC1	P38988	300 aa		4.96	□□□□□ -1.62
SEC13	YLR208W	YFL064C	P43540	174 aa		4.96	□□□□□ -1.62
SEC13	YLR208W	YFL012W	P43580	148 aa		4.96	□□□□□ -1.62
SEC13	YLR208W	HIT1	P46973	164 aa		4.96	□□□□□ -1.62
SEC13	YLR208W	TIS11	P47977	285 aa		4.96	□□□□□ -1.62
SEC13	YLR208W	YGR015C	P53208	328 aa		4.96	□□□□□ -1.62
SEC13	YLR208W	SSU72	P53538	206 aa	Predicted RBP	4.96	□□□□□ -1.62
SEC13	YLR208W	ASI2	P53895	289 aa		4.96	□□□□□ -1.62
SEC13	YLR208W	ECM11	Q04110	302 aa		4.96	□□□□□ -1.62
SEC13	YLR208W	HOF1	Q05080	669 aa		4.96	□□□□□ -1.62
SEC13	YLR208W	YMR034C	Q05131	434 aa	Predicted RBP	4.96	□□□□□ -1.62
SEC13	YLR208W	MRPL35	Q06678	367 aa		4.96	□□□□□ -1.62
SEC13	YLR208W	CYK3	Q07533	885 aa		4.96	□□□□□ -1.62
SEC13	YLR208W	MRH1	Q12117	320 aa	Predicted RBP	4.96	□□□□□ -1.62
SEC13	YLR208W	RIO1	Q12196	484 aa	Known RBP	4.96	□□□□□ -1.62
SEC13	YLR208W	FAS1	P07149	2051 aa	Known RBP	4.95	□□□□□ -1.62
SEC13	YLR208W	YLR415C	O13578	112 aa		4.95	□□□□□ -1.62
SEC13	YLR208W	GPH1	P06738	902 aa	Known RBP	4.95	□□□□□ -1.62
SEC13	YLR208W	PUT2	P07275	575 aa		4.95	□□□□□ -1.62
SEC13	YLR208W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
SEC13	YLR208W	SEN2	P16658	377 aa		4.95	□□□□□ -1.62
SEC13	YLR208W	ZRC1	P20107	442 aa		4.95	□□□□□ -1.62
SEC13	YLR208W	APA2	P22108	325 aa		4.95	□□□□□ -1.62
SEC13	YLR208W	CMK2	P22517	447 aa		4.95	□□□□□ -1.62
SEC13	YLR208W	STP22	P25604	385 aa		4.95	□□□□□ -1.62
SEC13	YLR208W	TAH1	P25638	111 aa	Predicted RBP	4.95	□□□□□ -1.62
SEC13	YLR208W	YPS1	P32329	569 aa		4.95	□□□□□ -1.62
SEC13	YLR208W	YMC1	P32331	307 aa		4.95	□□□□□ -1.62
SEC13	YLR208W	MNN2	P38069	597 aa		4.95	□□□□□ -1.62
SEC13	YLR208W	SIC1	P38634	284 aa		4.95	□□□□□ -1.62
SEC13	YLR208W	YHR112C	P38716	378 aa		4.95	□□□□□ -1.62
SEC13	YLR208W	ALP1	P38971	573 aa		4.95	□□□□□ -1.62
SEC13	YLR208W	UIP3	P39547	235 aa		4.95	□□□□□ -1.62
SEC13	YLR208W	SEC72	P39742	193 aa	Known RBP	4.95	□□□□□ -1.62
SEC13	YLR208W	LCP5	P40079	357 aa	Predicted RBP	4.95	□□□□□ -1.62
SEC13	YLR208W	DPB11	P47027	764 aa	Predicted RBP	4.95	□□□□□ -1.62
SEC13	YLR208W	SPT20	P50875	604 aa		4.95	□□□□□ -1.62
SEC13	YLR208W	LSG1	P53145	640 aa	Known RBP	4.95	□□□□□ -1.62
SEC13	YLR208W	MRPL50	P53724	139 aa		4.95	□□□□□ -1.62
SEC13	YLR208W	SAM50	P53969	484 aa		4.95	□□□□□ -1.62
SEC13	YLR208W	DIA1	P54005	336 aa		4.95	□□□□□ -1.62
SEC13	YLR208W	PRP38	Q00723	242 aa	Predicted RBP	4.95	□□□□□ -1.62
SEC13	YLR208W	YPL068C	Q02749	293 aa		4.95	□□□□□ -1.62
SEC13	YLR208W	USA1	Q03714	838 aa		4.95	□□□□□ -1.62
SEC13	YLR208W	SSY1	Q03770	852 aa		4.95	□□□□□ -1.62
SEC13	YLR208W	ARR3	Q06598	404 aa		4.95	□□□□□ -1.62
SEC13	YLR208W	PAM18	Q07914	168 aa		4.95	□□□□□ -1.62
SEC13	YLR208W	YLR122C	Q12312	125 aa		4.95	□□□□□ -1.62
SEC13	YLR208W	ICT1	Q12385	394 aa		4.95	□□□□□ -1.62
SEC13	YLR208W	PET494	P07390	489 aa	Predicted RBP	4.94	□□□□□ -1.62
SEC13	YLR208W	SPS100	P13130	326 aa		4.94	□□□□□ -1.62
SEC13	YLR208W	MGR1	P25573	417 aa		4.94	□□□□□ -1.62
SEC13	YLR208W	TPS2	P31688	896 aa	Known RBP	4.94	□□□□□ -1.62
SEC13	YLR208W	UBC6	P33296	250 aa	Predicted RBP	4.94	□□□□□ -1.62
SEC13	YLR208W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
SEC13	YLR208W	FMP52	P40008	231 aa		4.94	□□□□□ -1.62
SEC13	YLR208W	ICE2	P40499	491 aa		4.94	□□□□□ -1.62
SEC13	YLR208W	SNO3	P43544	222 aa		4.94	□□□□□ -1.62
SEC13	YLR208W	TMA22	P47089	198 aa	Predicted RBP	4.94	□□□□□ -1.62
SEC13	YLR208W	YJR149W	P47177	404 aa		4.94	□□□□□ -1.62
SEC13	YLR208W	KAP114	P53067	1004 aa		4.94	□□□□□ -1.62
SEC13	YLR208W	IMO32	P53219	342 aa		4.94	□□□□□ -1.62
SEC13	YLR208W	IST1	P53843	298 aa	Predicted RBP	4.94	□□□□□ -1.62
SEC13	YLR208W	OCA2	P53949	197 aa		4.94	□□□□□ -1.62
SEC13	YLR208W	STD1	Q02794	444 aa		4.94	□□□□□ -1.62
SEC13	YLR208W	TAF12	Q03761	539 aa		4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 144.2 ms