RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W RCK2P38623 610 aa1.93□□□□□ -2.1
PEP8YJL053W LIN1P38852 340 aaPredicted RBP1.93□□□□□ -2.1
PEP8YJL053W GGC1P38988 300 aa1.93□□□□□ -2.1
PEP8YJL053W RPS14BP39516 138 aaKnown RBP1.93□□□□□ -2.1
PEP8YJL053W PGU1P47180 361 aa1.93□□□□□ -2.1
PEP8YJL053W NAS6P50086 228 aa1.93□□□□□ -2.1
PEP8YJL053W TAF6P53040 516 aa1.93□□□□□ -2.1
PEP8YJL053W SUR7P54003 302 aa1.93□□□□□ -2.1
PEP8YJL053W RMI1Q02685 241 aa1.93□□□□□ -2.1
PEP8YJL053W YDR262WQ12331 272 aa1.93□□□□□ -2.1
PEP8YJL053W KRR1P25586 316 aaPredicted RBP1.92□□□□□ -2.1
PEP8YJL053W MEI5P32489 222 aa1.92□□□□□ -2.1
PEP8YJL053W MMS21P38632 267 aa1.92□□□□□ -2.1
PEP8YJL053W NAS2P40555 220 aa1.92□□□□□ -2.1
PEP8YJL053W COQ5P49017 307 aa1.92□□□□□ -2.1
PEP8YJL053W SED5Q01590 340 aa1.92□□□□□ -2.1
PEP8YJL053W API2Q04413 109 aa1.92□□□□□ -2.1
PEP8YJL053W DTD1Q07648 150 aaKnown RBP1.92□□□□□ -2.1
PEP8YJL053W YOR376WQ08900 122 aa1.92□□□□□ -2.1
PEP8YJL053W SLF1Q12034 447 aaKnown RBP1.92□□□□□ -2.1
PEP8YJL053W RAX2Q12465 1220 aa1.92□□□□□ -2.1
PEP8YJL053W MHP1P43638 1398 aa1.91□□□□□ -2.1
PEP8YJL053W VPS63O13549 108 aa1.91□□□□□ -2.1
PEP8YJL053W CDC37P06101 506 aaKnown RBP1.91□□□□□ -2.1
PEP8YJL053W GAL3P13045 520 aa1.91□□□□□ -2.1
PEP8YJL053W RAD23P32628 398 aaKnown RBP1.91□□□□□ -2.1
PEP8YJL053W KTI12P34253 313 aaKnown RBP1.91□□□□□ -2.1
PEP8YJL053W DTR1P38125 572 aa1.91□□□□□ -2.1
PEP8YJL053W POP2P39008 433 aa1.91□□□□□ -2.1
PEP8YJL053W FHL1P39521 936 aa1.91□□□□□ -2.1
PEP8YJL053W RRT13P40042 185 aa1.91□□□□□ -2.1
PEP8YJL053W YCH1P42937 148 aa1.91□□□□□ -2.1
PEP8YJL053W YFR018CP43599 363 aa1.91□□□□□ -2.1
PEP8YJL053W YGR168CP53293 376 aa1.91□□□□□ -2.1
PEP8YJL053W PXR1P53335 271 aaPredicted RBP1.91□□□□□ -2.1
PEP8YJL053W IES4Q08561 116 aa1.91□□□□□ -2.1
PEP8YJL053W PET18P25362 215 aa1.9□□□□□ -2.11
PEP8YJL053W TIP20P33891 701 aa1.9□□□□□ -2.11
PEP8YJL053W SMP1P38128 452 aa1.9□□□□□ -2.11
PEP8YJL053W CTM1P38818 585 aa1.9□□□□□ -2.11
PEP8YJL053W SSO2P39926 295 aa1.9□□□□□ -2.11
PEP8YJL053W YGR067CP53243 804 aa1.9□□□□□ -2.11
PEP8YJL053W YLR297WQ05899 129 aa1.9□□□□□ -2.11
PEP8YJL053W TAF10Q12030 206 aa1.9□□□□□ -2.11
PEP8YJL053W RTC5Q12108 567 aaKnown RBP1.9□□□□□ -2.11
PEP8YJL053W RPN6Q12377 434 aa1.9□□□□□ -2.11
PEP8YJL053W AUS1Q08409 1394 aa1.89□□□□□ -2.11
PEP8YJL053W CKA2P19454 339 aa1.89□□□□□ -2.11
PEP8YJL053W CBF5P33322 483 aaKnown RBP RIP-Chip data1.89□□□□□ -2.11not detected
PEP8YJL053W SMF2P38778 549 aa1.89□□□□□ -2.11
PEP8YJL053W END3P39013 349 aa1.89□□□□□ -2.11
PEP8YJL053W UTP25P40498 721 aaKnown RBP1.89□□□□□ -2.11
PEP8YJL053W IGO1P53897 168 aa1.89□□□□□ -2.11
PEP8YJL053W UTP15Q04305 513 aaKnown RBP1.89□□□□□ -2.11
PEP8YJL053W MRX8Q05473 314 aa1.89□□□□□ -2.11
PEP8YJL053W FAR10Q06001 478 aa1.89□□□□□ -2.11
PEP8YJL053W PIN3Q06449 215 aa1.89□□□□□ -2.11
PEP8YJL053W YOL029CQ08187 201 aa1.89□□□□□ -2.11
PEP8YJL053W TIR4Q12218 487 aaPredicted RBP1.89□□□□□ -2.11
PEP8YJL053W PRM4Q12498 284 aa1.89□□□□□ -2.11
PEP8YJL053W YAL067W-AQ8TGK6 75 aa1.89□□□□□ -2.11
PEP8YJL053W REP1P03871 373 aa1.88□□□□□ -2.11
PEP8YJL053W GCD2P12754 651 aaPredicted RBP1.88□□□□□ -2.11
PEP8YJL053W YPS1P32329 569 aa1.88□□□□□ -2.11
PEP8YJL053W TAE1P38340 232 aa1.88□□□□□ -2.11
PEP8YJL053W FRT2P39734 528 aa1.88□□□□□ -2.11
PEP8YJL053W INA22P40576 216 aa1.88□□□□□ -2.11
PEP8YJL053W UFE1P41834 346 aa1.88□□□□□ -2.11
PEP8YJL053W IRC4Q03036 179 aa1.88□□□□□ -2.11
PEP8YJL053W SCS7Q03529 384 aa1.88□□□□□ -2.11
PEP8YJL053W APC4Q04601 652 aa1.88□□□□□ -2.11
PEP8YJL053W MRX9Q07349 420 aaKnown RBP1.88□□□□□ -2.11
PEP8YJL053W RDL2Q08742 149 aaKnown RBP1.88□□□□□ -2.11
PEP8YJL053W YPR1Q12458 312 aa1.88□□□□□ -2.11
PEP8YJL053W FLO11P08640 1367 aa1.87□□□□□ -2.11
PEP8YJL053W CBP2P03874 630 aaPredicted RBP1.87□□□□□ -2.11
PEP8YJL053W RPL18AP0CX49 186 aaKnown RBP1.87□□□□□ -2.11
PEP8YJL053W RPL18BP0CX50 186 aaKnown RBP1.87□□□□□ -2.11
PEP8YJL053W ERD1P16151 362 aa1.87□□□□□ -2.11
PEP8YJL053W SUR1P33300 382 aa1.87□□□□□ -2.11
PEP8YJL053W YKL187CP34231 750 aa1.87□□□□□ -2.11
PEP8YJL053W SWC5P38326 303 aa1.87□□□□□ -2.11
PEP8YJL053W YDR089WP38966 869 aa1.87□□□□□ -2.11
PEP8YJL053W AIM20P40451 204 aa1.87□□□□□ -2.11
PEP8YJL053W YIL054WP40524 105 aa1.87□□□□□ -2.11
PEP8YJL053W YIR035CP40579 254 aa1.87□□□□□ -2.11
PEP8YJL053W MIC19P43594 170 aa1.87□□□□□ -2.11
PEP8YJL053W PMT4P46971 762 aa1.87□□□□□ -2.11
PEP8YJL053W LOH1P47055 219 aa1.87□□□□□ -2.11
PEP8YJL053W CAB5Q03941 241 aa1.87□□□□□ -2.11
PEP8YJL053W VPS20Q04272 221 aa1.87□□□□□ -2.11
PEP8YJL053W YLR012CQ07927 99 aa1.87□□□□□ -2.11
PEP8YJL053W SAM4Q08985 325 aaKnown RBP1.87□□□□□ -2.11
PEP8YJL053W REX3Q12090 404 aa1.87□□□□□ -2.11
PEP8YJL053W YPL245WQ12179 454 aaKnown RBP1.87□□□□□ -2.11
PEP8YJL053W YOL085CQ99345 113 aa1.87□□□□□ -2.11
PEP8YJL053W SAR1P20606 190 aaKnown RBP1.86□□□□□ -2.11
PEP8YJL053W TPS2P31688 896 aaKnown RBP1.86□□□□□ -2.11
PEP8YJL053W ZRT1P32804 376 aa1.86□□□□□ -2.11
PEP8YJL053W DBP7P36120 742 aaKnown RBP1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 158.4 ms